| | gene | name | fitness | t score | description | |
|---|
| b0464 | acrR | +4.6 | 28.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3169 | nusA | +3.5 | 10.8 | transcription elongation factor NusA (NCBI) | compare |
| b1187 | fadR | +3.1 | 14.2 | fatty acid metabolism regulator (NCBI) | compare |
| b0955 | ycbZ | +3.0 | 18.0 | predicted peptidase (NCBI) | compare |
| b0439 | lon | +2.9 | 13.6 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3390 | aroK | +2.5 | 6.3 | shikimate kinase I (NCBI) | compare |
| b3493 | pitA | +2.5 | 16.7 | phosphate transporter, low-affinity (NCBI) | compare |
| b2904 | gcvH | +2.3 | 2.0 | glycine cleavage system protein H (NCBI) | compare |
| b1049 | mdoH | +2.3 | 16.2 | glucosyltransferase MdoH (NCBI) | compare |
| b3205 | yhbJ | +2.2 | 8.8 | hypothetical protein (NCBI) | compare |
| b1048 | mdoG | +2.1 | 12.1 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b1865 | nudB | +2.1 | 4.3 | dATP pyrophosphohydrolase (NCBI) | compare |
| b3806 | cyaA | +2.0 | 10.4 | adenylate cyclase (NCBI) | compare |
| b4042 | dgkA | +1.9 | 5.6 | diacylglycerol kinase (NCBI) | compare |
| b2517 | yfgB | +1.8 | 10.5 | predicted enzyme (NCBI) | conserved |
| b2688 | gshA | +1.7 | 10.2 | glutamate--cysteine ligase (NCBI) | compare |
| b2175 | spr | +1.7 | 5.8 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b1530 | marR | +1.7 | 5.1 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b0685 | ybfE | +1.6 | 6.7 | orf, hypothetical protein (VIMSS) | compare |
| b0926 | ycbK | +1.6 | 5.2 | hypothetical protein (NCBI) | compare |
| b1185 | dsbB | +1.5 | 5.5 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b0912 | ihfB | +1.5 | 4.1 | integration host factor subunit beta (NCBI) | compare |
| b0125 | hpt | +1.5 | 6.6 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b2279 | nuoK | +1.5 | 3.0 | NADH dehydrogenase subunit K (NCBI) | compare |
| b2951 | yggS | +1.4 | 7.4 | predicted enzyme (NCBI) | compare |
| b1628 | rsxB | +1.4 | 2.8 | electron transport complex protein RnfB (NCBI) | compare |
| b4241 | treR | +1.4 | 10.8 | trehalose repressor (NCBI) | compare |
| b2531 | iscR | +1.3 | 2.5 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2947 | gshB | +1.3 | 6.2 | glutathione synthetase (NCBI) | compare |
| b1582 | ynfA | +1.3 | 2.5 | hypothetical protein (NCBI) | compare |
| b1217 | chaB | +1.2 | 1.7 | cation transport regulator (NCBI) | compare |
| b4592 | yccB | +1.2 | 1.5 | hypothetical protein (RefSeq) | compare |
| b3688 | yidQ | +1.2 | 5.8 | orf, hypothetical protein (VIMSS) | compare |
| b1630 | rsxD | +1.1 | 3.1 | electron transport complex protein RnfD (NCBI) | compare |
| b2684 | mprA | +1.1 | 4.7 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b4246 | pyrL | +1.1 | 3.4 | pyrBI operon leader peptide (NCBI) | compare |
| b2259 | pmrD | +1.1 | 1.4 | polymyxin resistance protein B (VIMSS) | compare |
| b2516 | yfgA | +1.1 | 5.9 | hypothetical protein (NCBI) | compare |
| b3792 | wzxE | +1.1 | 7.3 | O-antigen translocase (NCBI) | compare |
| b3863 | polA | +1.0 | 1.2 | DNA polymerase I (NCBI) | compare |
| b1412 | azoR | +1.0 | 3.6 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b1095 | fabF | +1.0 | 6.0 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b2285 | nuoE | +1.0 | 2.0 | NADH dehydrogenase subunit E (NCBI) | compare |
| b2618 | b2618 | +1.0 | 3.4 | orf, hypothetical protein (VIMSS) | compare |
| b1103 | ycfF | +1.0 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0247 | ykfG | +0.9 | 1.7 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b3261 | fis | +0.9 | 2.1 | DNA-binding protein Fis (NCBI) | compare |
| b0209 | yafD | +0.9 | 5.3 | hypothetical protein (NCBI) | compare |
| b3388 | damX | +0.9 | 7.7 | hypothetical protein (NCBI) | compare |
| b3180 | yhbY | +0.9 | 4.7 | predicted RNA-binding protein (NCBI) | compare |
| b2096 | gatY | +0.9 | 4.7 | tagatose-bisphosphate aldolase 1 (VIMSS) | compare |
| b4558 | yifL | +0.9 | 4.4 | predicted lipoprotein (NCBI) | compare |
| b2083 | yegZ | +0.9 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b4527 | b1354 | +0.9 | 2.7 | orf, hypothetical protein (VIMSS) | compare |
| b2282 | nuoH | +0.9 | 3.1 | NADH dehydrogenase subunit H (NCBI) | compare |
| b0143 | pcnB | +0.9 | 4.1 | poly(A) polymerase I (VIMSS) | compare |
| b2263 | yfbB | +0.8 | 2.1 | predicted peptidase (NCBI) | compare |
| b1134 | ymfB | +0.8 | 2.5 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | compare |
| b0560 | nohB | +0.8 | 2.6 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b2287 | nuoB | +0.8 | 3.2 | NADH dehydrogenase subunit B (NCBI) | compare |
| b1842 | holE | +0.8 | 1.5 | DNA polymerase III, theta subunit (NCBI) | compare |
| b1284 | yciT | +0.8 | 2.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0051 | ksgA | +0.8 | 3.5 | dimethyladenosine transferase (NCBI) | compare |
| b1434 | ydcN | +0.8 | 1.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2708 | gutQ | +0.8 | 4.2 | orf, hypothetical protein (VIMSS) | compare |
| b3181 | greA | +0.8 | 2.8 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b2262 | menB | +0.8 | 2.4 | naphthoate synthase (NCBI) | compare |
| b2281 | nuoI | +0.8 | 2.3 | NADH dehydrogenase subunit I (NCBI) | compare |
| b1090 | plsX | +0.8 | 1.6 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b4171 | miaA | +0.8 | 2.5 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b2906 | visC | +0.8 | 4.0 | hypothetical protein (NCBI) | compare |
| b1446 | ydcY | +0.8 | 1.8 | hypothetical protein (NCBI) | compare |
| b3465 | yhhF | +0.8 | 4.6 | predicted methyltransferase (NCBI) | compare |
| b4041 | plsB | +0.7 | 2.0 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b3204 | ptsN | +0.7 | 2.5 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b2450 | yffS | +0.7 | 1.1 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1632 | rsxE | +0.7 | 4.1 | NADH-ubiquinone oxidoreductase (NCBI) | compare |
| b1070 | flgN | +0.7 | 1.3 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b2835 | ygeD | +0.7 | 4.9 | predicted inner membrane protein (NCBI) | compare |
| b2659 | b2659 | +0.7 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1712 | ihfA | +0.7 | 1.0 | integration host factor subunit alpha (NCBI) | compare |
| b4596 | yciZ | +0.7 | 1.2 | hypothetical protein (RefSeq) | compare |
| b1253 | yciA | +0.7 | 1.6 | predicted hydrolase (NCBI) | compare |
| b2319 | usg | +0.7 | 2.8 | hypothetical protein (NCBI) | compare |
| b0852 | rimK | +0.7 | 3.4 | ribosomal protein S6 modification protein (NCBI) | compare |
| b1805 | fadD | +0.7 | 4.3 | acyl-CoA synthase (NCBI) | compare |
| b3257 | yhdT | +0.7 | 2.8 | conserved inner membrane protein (NCBI) | compare |
| b4175 | hflC | +0.7 | 4.3 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b2912 | ygfA | +0.7 | 1.9 | putative ligase (VIMSS) | compare |
| b2061 | wzb | +0.7 | 1.6 | protein-tyrosine phosphatase (NCBI) | compare |
| b0542 | renD | +0.7 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0974 | hyaC | +0.7 | 2.2 | hydrogenase 1, b-type cytochrome subunit (NCBI) | compare |
| b3250 | mreC | +0.7 | 0.5 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b0263 | afuB | +0.7 | 2.2 | CP4-6 prophage; predicted ferric trasnporter subunit (RefSeq) | compare |
| b4538 | yoeF | +0.7 | 1.3 | hypothetical protein (RefSeq) | compare |
| b4438 | cyaR | +0.6 | 1.3 | sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq) | compare |
| b3057 | bacA | +0.6 | 3.7 | undecaprenyl pyrophosphate phosphatase (NCBI) | compare |
| b0407 | yajC | +0.6 | 1.6 | preprotein translocase subunit YajC (NCBI) | compare |
| b3926 | glpK | +0.6 | 5.4 | glycerol kinase (NCBI) | compare |
| b1977 | asnT | +0.6 | 1.8 | tRNA-Asn (NCBI) | compare |
| b1424 | mdoD | +0.6 | 3.0 | glucan biosynthesis protein, periplasmic (RefSeq) | compare |
| b1563 | relE | +0.6 | 1.3 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b2095 | gatZ | +0.6 | 3.3 | D-tagatose 1,6-bisphosphate aldolase 2, subunit (NCBI) | compare |
| b2502 | ppx | +0.6 | 4.1 | exopolyphosphatase (NCBI) | compare |
| b1573 | ydfC | +0.6 | 1.2 | Qin prophage; predicted protein (RefSeq) | compare |
| b2280 | nuoJ | +0.6 | 2.5 | NADH dehydrogenase subunit J (NCBI) | compare |
| b1290 | sapF | +0.6 | 1.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2240 | glpT | +0.6 | 4.6 | sn-glycerol-3-phosphate transporter (NCBI) | compare |
| b2683 | ygaH | +0.6 | 3.5 | predicted inner membrane protein (NCBI) | compare |
| b4529 | ydbJ | +0.6 | 0.8 | hypothetical protein (NCBI) | compare |
| b2329 | aroC | +0.6 | 2.9 | chorismate synthase (NCBI) | compare |
| b0430 | cyoC | +0.6 | 2.9 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b2066 | udk | +0.6 | 3.0 | uridine/cytidine kinase (VIMSS) | compare |
| b3203 | yhbH | +0.6 | 1.1 | predicted ribosome-associated, sigma 54 modulation protein (NCBI) | compare |
| b0678 | nagB | +0.6 | 2.8 | glucosamine-6-phosphate deaminase (NCBI) | compare |
| b1915 | yecF | +0.6 | 3.0 | hypothetical protein (NCBI) | compare |
| b1635 | gst | +0.6 | 2.3 | glutathionine S-transferase (NCBI) | compare |
| b3398 | yrfF | +0.6 | 2.3 | predicted inner membrane protein (NCBI) | compare |
| b4359 | mdoB | +0.6 | 5.0 | phosphoglycerol transferase I (VIMSS) | compare |
| b0982 | yccY | +0.6 | 2.0 | putative phosphatase (VIMSS) | compare |
| b2318 | truA | +0.6 | 1.2 | tRNA pseudouridine synthase A (NCBI) | compare |
| b4063 | soxR | +0.6 | 1.8 | DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing (NCBI) | compare |
| b2836 | aas | +0.6 | 4.1 | 2-acyl-glycerophospho-ethanolamine acyltransferase (NCBI) | compare |
| b1811 | yoaH | +0.6 | 1.9 | hypothetical protein (NCBI) | compare |
| b2283 | nuoG | +0.6 | 3.5 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b4435 | isrC | +0.6 | 1.5 | unknown RNA (NCBI) | compare |
| b1832 | yebR | +0.6 | 2.5 | free methionine-(R)-sulfoxide reductase (RefSeq) | compare |
| b1742 | b1742 | +0.6 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b2421 | cysM | +0.6 | 2.2 | cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) | compare |
| b4370 | leuQ | +0.6 | 1.7 | tRNA-Leu (NCBI) | compare |
| b1293 | sapB | +0.6 | 0.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1220 | ychO | +0.6 | 2.9 | predicted invasin (RefSeq) | compare |
| b2092 | gatC | +0.6 | 3.2 | galactitol-specific enzyme IIC component of PTS (NCBI) | compare |
| b1661 | cfa | +0.6 | 2.7 | cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) (NCBI) | compare |
| b2156 | lysP | +0.6 | 3.8 | lysine transporter (NCBI) | compare |
| b3977 | tyrU | +0.6 | 0.6 | tRNA-Tyr (NCBI) | compare |
| b0920 | ycbC | +0.5 | 1.5 | conserved inner membrane protein (NCBI) | compare |
| b4513 | kdpF | +0.5 | 1.0 | potassium ion accessory transporter subunit (NCBI) | compare |
| b1186 | nhaB | +0.5 | 3.5 | NhaB sodium/proton transporter (Katherine Huang) | compare |
| b1251 | yciI | +0.5 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b3611 | yibN | +0.5 | 1.9 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b4557 | yidD | +0.5 | 1.6 | hypothetical protein (NCBI) | compare |
| b2782 | chpA | +0.5 | 1.9 | toxin of the ChpA-ChpR toxin-antitoxin system, endoribonuclease (NCBI) | compare |
| b2286 | nuoC | +0.5 | 2.2 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b3258 | panF | +0.5 | 3.6 | sodium/pantothenate symporter (VIMSS) | compare |
| b1349 | recT | +0.5 | 3.1 | Rac prophage; recombination and repair protein (NCBI) | compare |
| b4577 | sgrS | +0.5 | 1.4 | small antisense RNA (NCBI) | compare |
| b1096 | pabC | +0.5 | 2.5 | 4-amino-4-deoxychorismate lyase (NCBI) | compare |
| b3781 | trxA | +0.5 | 1.9 | thioredoxin 1 (VIMSS) | compare |
| b0885 | aat | +0.5 | 2.7 | leucyl/phenylalanyl-tRNA--protein transferase (NCBI) | compare |
| b2966 | yqgA | +0.5 | 2.3 | predicted inner membrane protein (NCBI) | compare |
| b3149 | yraO | +0.5 | 2.8 | DnaA initiator-associating factor for replication initiation (NCBI) | compare |
| b1868 | yecE | +0.5 | 1.8 | hypothetical protein (NCBI) | compare |
| b0428 | cyoE | +0.5 | 3.1 | protoheme IX farnesyltransferase (NCBI) | compare |
| b4695 | ykgT | +0.5 | 1.1 | no description | compare |
| b1839 | yebY | +0.5 | 1.7 | hypothetical protein (NCBI) | compare |
| b0998 | torD | +0.5 | 0.8 | chaperone protein TorD (NCBI) | compare |
| b0418 | pgpA | +0.5 | 2.6 | phosphatidylglycerophosphatase A (NCBI) | compare |
| b1524 | yneH | +0.5 | 0.5 | predicted glutaminase (NCBI) | compare |
| b2276 | nuoN | +0.5 | 2.6 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b2134 | pbpG | +0.5 | 2.9 | penicillin-binding protein 7 (VIMSS) | compare |
| b3555 | yiaG | +0.5 | 1.8 | predicted transcriptional regulator (NCBI) | compare |
| b1729 | ydjN | +0.5 | 1.6 | predicted transporter (NCBI) | compare |
| b1466 | narW | +0.5 | 2.1 | nitrate reductase 2 (NRZ), delta subunit (assembly subunit) (NCBI) | compare |
| b3221 | yhcH | +0.5 | 1.3 | hypothetical protein (NCBI) | compare |
| b0865 | ybjP | +0.5 | 1.4 | predicted lipoprotein (NCBI) | compare |
| b4508 | peaD | +0.5 | 1.4 | putative sensory transduction regulator (VIMSS) | compare |
| b2289 | lrhA | +0.5 | 3.4 | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) | compare |
| b2284 | nuoF | +0.5 | 2.3 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b0856 | potH | +0.5 | 2.3 | putrescine transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b2261 | menC | +0.5 | 2.5 | O-succinylbenzoate synthase (NCBI) | compare |
| b0250 | ykfB | +0.5 | 2.3 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b4174 | hflK | +0.5 | 3.5 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b1926 | fliT | +0.5 | 1.9 | predicted chaperone (NCBI) | compare |
| b1188 | ycgB | +0.5 | 2.7 | ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b3029 | ygiN | +0.5 | 1.5 | quinol monooxygenase (NCBI) | compare |
| b1780 | yeaD | +0.5 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b1138 | ymfE | +0.5 | 1.0 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b4409 | blr | +0.5 | 2.4 | beta-lactam resistance membrane protein (NCBI) | compare |
| b2277 | nuoM | +0.5 | 2.5 | NADH dehydrogenase subunit M (NCBI) | compare |
| b3742 | mioC | +0.5 | 2.2 | flavodoxin (NCBI) | compare |
| b1180 | ycgM | +0.5 | 2.0 | predicted isomerase/hydrolase (NCBI) | compare |
| b0977 | hyaF | +0.5 | 1.5 | protein involved in nickel incorporation into hydrogenase-1 proteins (NCBI) | compare |
| b3836 | b3836 | +0.5 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1856 | yebA | +0.5 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1244 | oppB | +0.5 | 3.2 | oligopeptide permease ABC transporter membrane protein (NCBI) | compare |
| b1684 | sufA | +0.5 | 1.3 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b2911 | ssrS | +0.5 | 1.0 | 6S regulatory RNA (NCBI) | compare |
| b2278 | nuoL | +0.5 | 3.3 | NADH dehydrogenase subunit L (NCBI) | compare |
| b1704 | aroH | +0.5 | 2.3 | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible (NCBI) | compare |
| b2946 | yggJ | +0.5 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b3527 | yhjJ | +0.5 | 4.2 | predicted zinc-dependent peptidase (NCBI) | compare |
| b0753 | ybgS | +0.5 | 2.1 | hypothetical protein (NCBI) | compare |
| b0493 | ybbO | +0.5 | 1.9 | short chain dehydrogenase (NCBI) | compare |
| b1556 | b1556 | +0.5 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b4390 | nadR | +0.5 | 3.5 | probable nadAB transcriptional regulator (VIMSS) | compare |
| b1697 | ydiQ | +0.5 | 2.5 | hypothetical protein (NCBI) | compare |
| b2467 | yffH | +0.5 | 2.4 | predicted NUDIX hydrolase (NCBI) | compare |
| b2264 | menD | +0.5 | 2.6 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) | compare |
| b0334 | prpD | +0.5 | 2.2 | 2-methylcitrate dehydratase (NCBI) | compare |