Experiment set10IT051 for Agrobacterium fabrum C58

Compare to:

sarcosine carbon source

200 most important genes:

  gene name fitness t score description  
Atu0679 -6.8 -6.6 ATP phosphoribosyltransferase compare
Atu2718 -6.3 -8.7 homoserine O-succinyltransferase compare
Atu2289 -6.2 -17.5 anthranilate synthase component I and II compare
Atu2264 -6.2 -13.8 2-isopropylmalate synthase compare
Atu1688 -6.0 -5.8 indole-3-glycerol-phosphate synthase compare
Atu2791 -6.0 -10.0 3-isopropylmalate dehydrogenase compare
Atu2709 -6.0 -18.4 3-isopropylmalate dehydratase, large subunit compare
Atu1750 -5.9 -5.0 phosphoribosyl c-AMP cyclohydrolase compare
Atu0017 -5.9 -4.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1850 -5.8 -5.8 phosphoribosylformylglycinamidine synthetase II compare
Atu2036 -5.8 -14.9 acetolactate synthase III, large subunit compare
Atu1845 -5.8 -6.8 phosphoribosylformylglycinamidine synthase I compare
Atu0537 -5.7 -6.8 histidinol dehydrogenase compare
Atu3740 -5.7 -11.6 fructose bisphosphate aldolase compare
Atu1687 -5.6 -12.0 anthranilate phosphoribosyltransferase compare
Atu0038 -5.6 -7.5 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0035 -5.5 -12.0 phosphoenolpyruvate carboxykinase compare
Atu3754 -5.3 -9.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1308 -5.3 -6.5 aspartate carbamoyl transferase catalytic subunit compare
Atu3755 -5.3 -6.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1588 -5.1 -11.4 homoserine dehydrogenase compare
Atu0041 -5.1 -3.5 glutamine amidotransferase compare
Atu0678 -5.1 -6.9 histidyl-tRNA synthetase compare
Atu1205 -5.0 -16.5 threonine dehydratase compare
Atu2726 -5.0 -23.0 pyruvate carboxylase compare
Atu2790 -4.9 -2.9 3-isopropylmalate dehydratase, small subunit compare
Atu0099 -4.9 -11.4 prephenate dehydratase compare
Atu0043 -4.8 -3.3 imidazoleglycerol-phosphate dehydratase compare
Atu0039 -4.8 -3.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu1075 -4.7 -9.7 amidophosphoribosyltransferase compare
Atu1140 -4.6 -7.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3739 -4.6 -4.2 phosphoglycerate kinase compare
Atu0432 -4.6 -9.4 O-succinylhomoserine sulfhydrylase compare
Atu0647 -4.6 -9.7 phosphoribosylamine--glycine ligase compare
Atu0399 -4.5 -9.7 dihydroorotase compare
Atu1307 -4.5 -6.6 dihydroorotase compare
Atu0803 -4.5 -20.3 pyruvate,orthophosphate dikinase compare
Atu0400 -4.5 -7.8 orotate phosphoribosyltransferase compare
Atu0030 -4.4 -2.8 phosphocarrier protein HPr compare
Atu0486 -4.4 -9.2 dihydroorotate dehydrogenase compare
Atu3885 -4.4 -11.6 inositol monophosphatase compare
Atu0536 -4.3 -10.6 hypothetical protein compare
Atu1620 -4.3 -13.0 triosephosphate isomerase compare
Atu0298 -4.3 -11.3 orotidine 5 compare
Atu1141 -4.1 -7.8 Phosphoribosylglycinamide synthetase compare
Atu2650 -4.1 -16.7 glycerol-3-phosphate dehydrogenase compare
Atu4505 -4.1 -12.6 LacI family transcriptional regulator compare
Atu1030 -3.8 -2.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0608 -3.8 -15.1 transcriptional regulator compare
Atu1844 -3.8 -5.1 Phosphoribosylformylglycinamidine synthetase compare
Atu0047 -3.7 -17.3 malate synthase G compare
Atu2747 -3.7 -13.9 hypothetical protein compare
Atu1359 -3.4 -2.2 dnaK deletion suppressor protein compare
Atu3707 -3.4 -4.4 phosphoserine aminotransferase compare
Atu0040 -3.3 -2.0 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0606 -3.3 -3.8 hypothetical protein compare
Atu2115 -3.2 -11.7 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu4310 -3.1 -18.5 sarcosine oxidase beta subunit compare
Atu0723 -3.1 -3.4 FAD dependent oxidoreductase compare
Atu2745 -3.0 -16.5 acetyl-coenzyme A synthetase compare
Atu2015 -3.0 -11.0 aminotransferase compare
Atu4313 -2.9 -7.7 sarcosine oxidase gamma subunit compare
Atu0607 -2.9 -14.2 isocitrate lyase compare
Atu4312 -2.9 -21.4 sarcosine oxidase alpha subunit compare
Atu3469 -2.9 -4.2 phosphoglyceromutase compare
Atu1589 -2.8 -8.7 aminotransferase, class I compare
Atu3783 -2.8 -16.8 glutamate synthase subunit beta compare
Atu3482 -2.8 -10.3 pantoate--beta-alanine ligase compare
Atu1686 -2.8 -16.3 peptidyl-prolyl cis-trans isomerse D compare
Atu3784 -2.8 -19.3 glutamate synthase large subunit compare
Atu0434 -2.7 -2.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4311 -2.6 -8.0 sarcosine oxidase delta subunit compare
Atu4309 -2.3 -9.8 AraC family transcriptional regulator compare
Atu3486 -2.3 -5.4 DeoR family transcriptional regulator compare
Atu4314 -2.3 -12.9 serine hydroxymethyltransferase compare
Atu8054 -2.2 -1.7 hypothetical protein compare
Atu6098 -2.1 -1.9 transcriptional regulator, HTH family compare
Atu2225 -2.1 -10.1 transcriptional regulator compare
Atu0641 -1.9 -5.8 hypothetical protein compare
Atu2684 -1.9 -2.3 hypothetical protein compare
Atu4217 -1.9 -2.4 TetR family transcriptional regulator compare
Atu4711 -1.8 -6.5 two component sensor kinase compare
Atu2548 -1.8 -11.4 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu2155 -1.8 -13.4 methionine synthase compare
Atu0062 -1.7 -9.8 transcriptional regulator, ROK family compare
Atu0029 -1.7 -7.4 S-adenosylhomocysteine hydrolase compare
Atu1028 -1.7 -3.3 hypothetical protein compare
Atu4773 -1.7 -3.0 two component response regulator compare
Atu3730 -1.7 -1.9 hypothetical protein compare
Atu6114 -1.7 -1.4 hypothetical protein compare
Atu1446 -1.6 -3.9 two component response regulator compare
Atu4685 -1.6 -7.0 LacI family transcriptional regulator compare
Atu0354 -1.5 -3.1 ferric uptake regulator compare
Atu0086 -1.5 -1.8 ribosome-binding factor A compare
Atu2224 -1.5 -6.6 aldehyde dehydrogenase compare
Atu2125 -1.4 -1.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu1759 -1.4 -8.5 L-serine dehydratase compare
Atu3706 -1.3 -7.2 D-3-phosphoglycerate dehydrogenase compare
Atu0664 -1.3 -8.9 transcriptional regulator, LysR family compare
Atu2239 -1.3 -4.6 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu3483 -1.3 -5.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu0331 -1.3 -2.6 sigma-54 modulation protein compare
Atu1748 -1.3 -7.1 NIFU-like protein compare
Atu3337 -1.3 -8.0 LacI family transcriptional regulator compare
Atu1580 -1.2 -8.4 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu8115 -1.2 -4.7 Hypothetical Protein compare
Atu0769 -1.2 -1.1 protoheme IX farnesyltransferase compare
Atu4098 -1.2 -8.2 quinolinate synthetase compare
Atu0361 -1.2 -2.7 transcriptional regulator compare
Atu3908 -1.2 -8.4 GntR family transcriptional regulator compare
Atu5125 -1.2 -4.0 GntR family transcriptional regulator compare
Atu0031 -1.2 -1.6 PTS system, IIA component compare
Atu0026 -1.2 -1.3 hypothetical protein compare
Atu1286 -1.1 -3.8 hypothetical protein compare
Atu1454 -1.1 -5.5 siroheme synthase compare
Atu4317 -1.1 -4.5 TetR family transcriptional regulator compare
Atu4514 -1.1 -3.1 RpiR family transcriptional regulator compare
Atu1456 -1.1 -6.1 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu3731 -1.1 -4.6 5-formyltetrahydrofolate cyclo-ligase compare
Atu0626 -1.1 -6.9 alcohol dehydrogenase compare
Atu3963 -1.1 -5.3 GntR family transcriptional regulator compare
Atu1904 -1.1 -6.1 transcriptional regulator compare
Atu4096 -1.0 -6.2 nicotinate-nucleotide pyrophosphorylase compare
Atu1464 -1.0 -4.4 glycine cleavage system T protein, aminomethyltransferase compare
Atu0502 -1.0 -5.6 acetyl-CoA acetyltransferase compare
Atu3997 -1.0 -7.5 biotin synthetase compare
Atu2555 -1.0 -2.7 L-lysine 2,3-aminomutase compare
Atu0876 -1.0 -2.4 superoxide dismutase compare
Atu0188 -1.0 -2.1 ABC transporter, membrane spanning protein (peptide) compare
Atu0422 -1.0 -1.9 ABC transporter, membrane spanning protein compare
Atu1579 -1.0 -6.5 ABC transporter, membrane spanning protein (amino acid) compare
Atu0501 -1.0 -6.8 acyl-CoA dehydrogenase compare
Atu4346 -1.0 -2.8 hypothetical protein compare
Atu2207 -1.0 -2.4 two component sensor kinase compare
Atu4615 -1.0 -5.7 glucose-1-phosphate thymidylyltransferase compare
Atu0421 -1.0 -1.7 ABC transporter, membrane spanning protein compare
Atu4613 -0.9 -6.9 glycosyltransferase compare
Atu4364 -0.9 -5.6 LacI family transcriptional regulator compare
Atu2554 -0.9 -2.0 lysyl-tRNA synthetase compare
Atu1578 -0.9 -5.5 ABC transporter, membrane spanning protein (amino acid) compare
Atu1462 -0.9 -6.3 glycine cleavage system protein P2 compare
Atu1127 -0.9 -1.9 molybdopterin converting factor small subunit compare
Atu4702 -0.9 -5.5 GntR family transcriptional regulator compare
Atu4541 -0.9 -2.6 carboxymuconolactone decarboxylase compare
Atu2633 -0.9 -2.7 RhtB family transporter compare
Atu4825 -0.9 -4.9 dehydrogenase compare
Atu4614 -0.9 -5.7 glycosyltransferase compare
Atu3162 -0.9 -4.5 LacI family transcriptional regulator compare
Atu3120 -0.9 -1.3 hypothetical protein compare
Atu1577 -0.9 -4.2 ABC transporter, substrate binding protein (amino acid) compare
Atu4824 -0.9 -5.2 IclR family transcriptional regulator compare
Atu1774 -0.9 -4.4 ABC transporter, substrate binding protein (peptide) compare
Atu2141 -0.9 -3.5 hypothetical protein compare
Atu3763 -0.8 -1.4 hypothetical protein compare
Atu2376 -0.8 -0.7 hypothetical protein compare
Atu3912 -0.8 -4.9 hypothetical protein compare
Atu4618 -0.8 -5.2 dTDP-rhamnose-3,5-epimerase compare
Atu2041 -0.8 -1.8 acetyltransferase compare
Atu1405 -0.8 -2.4 transcriptional regulator, GntR family compare
Atu2802 -0.8 -4.5 precorrin-8X methylmutase compare
Atu0101 -0.8 -2.2 cytochrome c compare
Atu2183 -0.8 -4.3 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4576 -0.8 -5.1 ROK family transcriptional regulator compare
Atu2606 -0.8 -4.0 transcriptional regulator, GntR family compare
Atu3485 -0.8 -3.7 short chain dehydrogenase compare
Atu3712 -0.8 -1.5 hypothetical protein compare
Atu0503 -0.8 -5.6 enoyl-CoA hydratase compare
Atu8168 -0.8 -2.8 hypothetical protein compare
Atu2238 -0.8 -4.3 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu0770 -0.8 -3.6 cytochrome C oxidase assembly protein compare
Atu2740 -0.8 -4.1 transcriptional regulator, GntR family compare
Atu0190 -0.8 -3.7 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3264 -0.8 -3.4 IclR family transcriptional regulator compare
Atu0638 -0.8 -1.0 hypothetical protein compare
Atu0036 -0.7 -1.6 hypothetical protein compare
Atu3619 -0.7 -2.6 hypothetical protein compare
Atu2795 -0.7 -4.6 cobalamin biosynthetic protein compare
Atu4599 -0.7 -5.5 IclR family transcriptional regulator compare
Atu3878 -0.7 -5.0 transcriptional regulator compare
Atu0768 -0.7 -5.3 cytochrome-c oxidase chain I compare
Atu4166 -0.7 -2.1 UDP-glucose 4-epimerase compare
Atu1634 -0.7 -1.6 hypothetical protein compare
Atu0401 -0.7 -2.7 fructokinase compare
Atu0189 -0.7 -2.2 ABC transporter, membrane spanning protein (peptide) compare
Atu2532 -0.7 -1.4 transcriptional regulator, MarR family compare
Atu4446 -0.7 -4.1 hypothetical protein compare
Atu1570 -0.7 -0.8 hypothetical protein compare
Atu1810 -0.7 -0.9 hypothetical protein compare
Atu8088 -0.7 -1.8 hypothetical protein compare
Atu0346 -0.7 -1.7 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu4873 -0.7 -3.0 TetR family transcriptional regulator compare
Atu1779 -0.7 -1.8 hypothetical protein compare
Atu3115 -0.7 -3.9 TetR family transcriptional regulator compare
Atu2205 -0.7 -2.1 transcriptional regulator, MarR family compare
Atu0861 -0.7 -1.4 hypothetical protein compare
Atu2798 -0.7 -2.7 precorrin-6y methyltransferase compare
Atu3144 -0.7 -3.5 GntR family transcriptional regulator compare
Atu3289 -0.7 -2.6 thiamine-phosphate pyrophosphorylase compare
Atu0025 -0.7 -1.9 hypothetical protein compare
Atu3311 -0.7 -5.2 phosphomannose isomerase compare


Specific Phenotypes

For 10 genes in this experiment

For carbon source sarcosine in Agrobacterium fabrum C58

For carbon source sarcosine across organisms