Experiment set10IT045 for Agrobacterium fabrum C58

Compare to:

a-Ketoglutaric acid disodium salt hydrate carbon source

200 most important genes:

  gene name fitness t score description  
Atu0038 -7.6 -5.3 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0679 -6.5 -6.3 ATP phosphoribosyltransferase compare
Atu1850 -6.3 -6.1 phosphoribosylformylglycinamidine synthetase II compare
Atu2289 -6.2 -17.1 anthranilate synthase component I and II compare
Atu2709 -6.1 -18.5 3-isopropylmalate dehydratase, large subunit compare
Atu1687 -6.0 -10.8 anthranilate phosphoribosyltransferase compare
Atu3707 -5.9 -4.1 phosphoserine aminotransferase compare
Atu3706 -5.9 -8.1 D-3-phosphoglycerate dehydrogenase compare
Atu0099 -5.9 -12.6 prephenate dehydratase compare
Atu0017 -5.7 -3.9 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1845 -5.5 -5.7 phosphoribosylformylglycinamidine synthase I compare
Atu1588 -5.5 -9.1 homoserine dehydrogenase compare
Atu0678 -5.4 -6.4 histidyl-tRNA synthetase compare
Atu2791 -5.4 -10.3 3-isopropylmalate dehydrogenase compare
Atu0537 -5.3 -7.2 histidinol dehydrogenase compare
Atu3739 -5.2 -3.1 phosphoglycerate kinase compare
Atu1308 -5.2 -6.9 aspartate carbamoyl transferase catalytic subunit compare
Atu1205 -5.2 -15.6 threonine dehydratase compare
Atu0399 -5.1 -9.2 dihydroorotase compare
Atu2264 -5.0 -15.2 2-isopropylmalate synthase compare
Atu1688 -5.0 -6.9 indole-3-glycerol-phosphate synthase compare
Atu1075 -5.0 -9.7 amidophosphoribosyltransferase compare
Atu2036 -4.9 -16.6 acetolactate synthase III, large subunit compare
Atu0041 -4.9 -3.3 glutamine amidotransferase compare
Atu2790 -4.8 -2.8 3-isopropylmalate dehydratase, small subunit compare
Atu0298 -4.7 -11.3 orotidine 5 compare
Atu0035 -4.7 -9.5 phosphoenolpyruvate carboxykinase compare
Atu0039 -4.6 -3.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu0043 -4.6 -3.2 imidazoleglycerol-phosphate dehydratase compare
Atu1140 -4.6 -3.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3740 -4.6 -10.9 fructose bisphosphate aldolase compare
Atu2040 -4.5 -6.4 phosphoserine phosphatase compare
Atu3469 -4.5 -3.1 phosphoglyceromutase compare
Atu1750 -4.4 -5.7 phosphoribosyl c-AMP cyclohydrolase compare
Atu2718 -4.4 -8.7 homoserine O-succinyltransferase compare
Atu1141 -4.4 -9.3 Phosphoribosylglycinamide synthetase compare
Atu0486 -4.3 -5.6 dihydroorotate dehydrogenase compare
Atu3754 -4.3 -8.1 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0647 -4.2 -9.0 phosphoribosylamine--glycine ligase compare
Atu0432 -4.2 -10.2 O-succinylhomoserine sulfhydrylase compare
Atu0400 -4.2 -8.0 orotate phosphoribosyltransferase compare
Atu4505 -4.0 -10.7 LacI family transcriptional regulator compare
Atu1307 -3.9 -5.8 dihydroorotase compare
Atu2650 -3.9 -13.0 glycerol-3-phosphate dehydrogenase compare
Atu1620 -3.9 -14.1 triosephosphate isomerase compare
Atu1844 -3.7 -5.0 Phosphoribosylformylglycinamidine synthetase compare
Atu2747 -3.6 -15.0 hypothetical protein compare
Atu0047 -3.6 -17.9 malate synthase G compare
Atu2225 -3.5 -12.6 transcriptional regulator compare
Atu0803 -3.5 -20.8 pyruvate,orthophosphate dikinase compare
Atu3885 -3.3 -9.8 inositol monophosphatase compare
Atu1030 -3.3 -3.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1359 -3.2 -2.0 dnaK deletion suppressor protein compare
Atu0040 -3.2 -1.9 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0536 -3.1 -7.2 hypothetical protein compare
Atu3755 -3.1 -5.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0607 -3.1 -16.5 isocitrate lyase compare
Atu0608 -3.0 -13.0 transcriptional regulator compare
Atu2745 -2.7 -17.4 acetyl-coenzyme A synthetase compare
Atu2015 -2.7 -14.1 aminotransferase compare
Atu3482 -2.4 -8.9 pantoate--beta-alanine ligase compare
Atu3763 -2.4 -2.3 hypothetical protein compare
Atu3731 -2.4 -8.4 5-formyltetrahydrofolate cyclo-ligase compare
Atu1686 -2.3 -14.7 peptidyl-prolyl cis-trans isomerse D compare
Atu4616 -2.3 -2.6 dTDP-4-dehydrorhamnose reductase compare
Atu2115 -2.2 -9.7 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu4711 -2.1 -8.1 two component sensor kinase compare
Atu3483 -2.0 -6.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu0606 -1.9 -2.5 hypothetical protein compare
Atu1589 -1.9 -7.1 aminotransferase, class I compare
Atu2224 -1.8 -7.8 aldehyde dehydrogenase conserved
Atu3783 -1.8 -10.4 glutamate synthase subunit beta compare
Atu0030 -1.7 -2.2 phosphocarrier protein HPr compare
Atu0205 -1.7 -10.4 methylmalonate-semialdehyde dehydrogenase compare
Atu0895 -1.6 -3.1 ABC transporter, substrate binding protein compare
Atu0029 -1.6 -6.2 S-adenosylhomocysteine hydrolase compare
Atu0626 -1.6 -8.9 alcohol dehydrogenase compare
Atu5125 -1.6 -5.3 GntR family transcriptional regulator compare
Atu2207 -1.6 -3.5 two component sensor kinase compare
Atu1462 -1.5 -9.7 glycine cleavage system protein P2 compare
Atu2125 -1.5 -2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu0141 -1.5 -1.4 cytochrome O ubiquinol oxidase subunit I compare
Atu4098 -1.5 -7.7 quinolinate synthetase compare
Atu4096 -1.4 -5.6 nicotinate-nucleotide pyrophosphorylase compare
Atu2155 -1.4 -11.0 methionine synthase compare
Atu1456 -1.4 -7.4 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu6114 -1.4 -2.0 hypothetical protein compare
Atu2684 -1.4 -3.1 hypothetical protein compare
Atu1446 -1.4 -2.6 two component response regulator compare
Atu1463 -1.4 -6.2 glycine cleavage system component H compare
Atu0769 -1.3 -1.7 protoheme IX farnesyltransferase compare
Atu1464 -1.3 -7.0 glycine cleavage system T protein, aminomethyltransferase compare
Atu0876 -1.3 -2.6 superoxide dismutase compare
Atu3784 -1.3 -10.5 glutamate synthase large subunit compare
Atu1454 -1.2 -4.2 siroheme synthase compare
Atu1952 -1.2 -1.8 hypothetical protein compare
Atu0189 -1.2 -3.0 ABC transporter, membrane spanning protein (peptide) compare
Atu1748 -1.2 -6.7 NIFU-like protein compare
Atu0723 -1.2 -1.8 FAD dependent oxidoreductase compare
Atu4773 -1.2 -1.7 two component response regulator compare
Atu1685 -1.2 -1.3 hypothetical protein compare
Atu0361 -1.2 -2.7 transcriptional regulator compare
Atu0062 -1.1 -5.6 transcriptional regulator, ROK family compare
Atu4502 -1.1 -5.4 cobalamin synthesis protein compare
Atu2554 -1.1 -1.6 lysyl-tRNA synthetase compare
Atu0664 -1.1 -6.5 transcriptional regulator, LysR family compare
Atu3005 -1.1 -1.4 hypothetical protein compare
Atu0086 -1.0 -1.0 ribosome-binding factor A compare
Atu4097 -1.0 -5.6 L-aspartate oxidase compare
Atu6165 -1.0 -1.3 hypothetical protein compare
Atu1028 -1.0 -2.1 hypothetical protein compare
Atu0687 -1.0 -2.0 hypothetical protein compare
Atu2548 -1.0 -6.9 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0663 -1.0 -6.7 hypothetical protein compare
Atu1455 -1.0 -4.0 hypothetical protein compare
Atu2640 -0.9 -3.1 hypothetical protein compare
Atu2800 -0.9 -2.9 precorrin-3B C17-methyltransferase compare
Atu3162 -0.9 -3.9 LacI family transcriptional regulator compare
Atu1774 -0.9 -5.2 ABC transporter, substrate binding protein (peptide) compare
Atu2183 -0.9 -4.2 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu1679 -0.9 -1.7 peptidyl prolyl cis-trans isomerase compare
Atu2798 -0.9 -3.6 precorrin-6y methyltransferase compare
Atu1291 -0.8 -1.4 hypothetical protein compare
Atu1904 -0.8 -3.9 transcriptional regulator compare
Atu4317 -0.8 -3.3 TetR family transcriptional regulator compare
Atu3486 -0.8 -2.6 DeoR family transcriptional regulator compare
Atu2433 -0.8 -1.0 hypothetical protein compare
Atu2633 -0.8 -2.2 RhtB family transporter compare
Atu0188 -0.8 -1.9 ABC transporter, membrane spanning protein (peptide) compare
Atu2821 -0.8 -3.2 transcriptional regulator, GntR family compare
Atu3466 -0.8 -1.4 ArsR family transcriptional regulator compare
Atu2209 -0.8 -2.2 pyrroline-5-carboxylate reductase compare
Atu8115 -0.8 -3.5 Hypothetical Protein compare
Atu2484 -0.8 -1.1 hypothetical protein compare
Atu4674 -0.8 -5.6 GntR family transcriptional regulator compare
Atu5075 -0.8 -4.0 GntR family transcriptional regulator compare
Atu3496 -0.8 -1.5 hypothetical protein compare
Atu3120 -0.8 -0.6 hypothetical protein compare
Atu3759 -0.8 -1.2 hypothetical protein compare
Atu0354 -0.8 -1.8 ferric uptake regulator compare
Atu2832 -0.8 -2.8 tRNA modification GTPase compare
Atu3908 -0.8 -4.2 GntR family transcriptional regulator compare
Atu2205 -0.7 -1.8 transcriptional regulator, MarR family compare
Atu4217 -0.7 -1.1 TetR family transcriptional regulator compare
Atu2802 -0.7 -3.3 precorrin-8X methylmutase compare
Atu0331 -0.7 -1.4 sigma-54 modulation protein compare
Atu4501 -0.7 -4.6 hypothetical protein compare
Atu5540 -0.7 -1.0 hypothetical protein compare
Atu0941 -0.7 -0.8 hypothetical protein compare
Atu0401 -0.7 -3.8 fructokinase compare
Atu4161 -0.7 -1.3 hypothetical protein compare
Atu1970 -0.7 -2.1 hypothetical protein compare
Atu4541 -0.7 -2.6 carboxymuconolactone decarboxylase compare
Atu0641 -0.7 -2.7 hypothetical protein compare
Atu0422 -0.7 -1.9 ABC transporter, membrane spanning protein compare
Atu4214 -0.7 -3.1 cold shock protein compare
Atu0977 -0.7 -2.0 serine protease DO-like protease compare
Atu0026 -0.7 -0.8 hypothetical protein compare
Atu3910 -0.7 -2.8 LamB/YcsF family protein compare
Atu4017 -0.7 -5.5 MFS permease compare
Atu4391 -0.7 -1.3 nitric oxide reductase NorE protein compare
Atu0501 -0.7 -5.2 acyl-CoA dehydrogenase compare
Atu0939 -0.7 -1.8 PemI protein compare
Atu6138 -0.7 -4.5 Repressor of the acc and arc operons compare
Atu4825 -0.7 -3.4 dehydrogenase compare
Atu0533 -0.6 -2.3 putative inhibitor of septum formation compare
Atu0894 -0.6 -1.3 ABC transporter, membrane spanning protein compare
Atu0346 -0.6 -2.5 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3337 -0.6 -3.8 LacI family transcriptional regulator compare
Atu3698 -0.6 -2.4 thioredoxin compare
Atu1770 -0.6 -3.5 glutamine synthetase compare
Atu2683 -0.6 -1.3 hypothetical protein compare
Atu3429 -0.6 -1.0 hypothetical protein compare
Atu3732 -0.6 -3.4 hemolysin compare
Atu4743 -0.6 -2.9 LacI family transcriptional regulator compare
Atu2193 -0.6 -0.7 hypothetical protein compare
Atu2237 -0.6 -2.9 cytochrome c1 compare
Atu2067 -0.6 -0.7 hypothetical protein compare
Atu4166 -0.6 -1.7 UDP-glucose 4-epimerase compare
Atu4618 -0.6 -4.8 dTDP-rhamnose-3,5-epimerase compare
Atu5501 -0.6 -1.9 hypothetical protein compare
Atu0322 -0.6 -2.4 enoyl CoA hydratase compare
Atu8034 -0.6 -2.3 hypothetical protein compare
Atu4346 -0.6 -3.1 hypothetical protein compare
Atu4068 -0.6 -0.8 sarcosine oxidase delta subunit compare
Atu3913 -0.6 -3.0 biotin carboxylase compare
Atu2493 -0.6 -4.0 NAD(P)+ transhydrogenase compare
Atu2831 -0.6 -2.5 glucose inhibited division protein A compare
Atu2442 -0.6 -1.4 hypothetical protein compare
Atu2239 -0.6 -2.0 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu0149 -0.6 -1.6 enoyl-(acyl-carrier-protein) reductase compare
Atu0926 -0.6 -2.4 hypothetical protein compare
Atu1302 -0.6 -1.5 hypothetical protein compare
Atu3730 -0.6 -0.6 hypothetical protein compare
Atu2805 -0.6 -2.9 cobalamin synthesis protein compare
Atu3712 -0.6 -1.0 hypothetical protein compare
Atu2201 -0.6 -1.3 hydrolase compare
Atu0923 -0.6 -2.5 hypothetical protein compare
Atu0819 -0.6 -2.0 hypothetical protein compare
Atu4613 -0.6 -4.5 glycosyltransferase compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source a-Ketoglutaric acid disodium salt hydrate in Agrobacterium fabrum C58

For carbon source a-Ketoglutaric acid disodium salt hydrate across organisms