Experiment set10IT044 for Agrobacterium fabrum C58

Compare to:

a-Ketoglutaric acid disodium salt hydrate carbon source

200 most important genes:

  gene name fitness t score description  
Atu0038 -6.7 -6.5 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1844 -6.7 -4.6 Phosphoribosylformylglycinamidine synthetase compare
Atu1750 -6.2 -8.5 phosphoribosyl c-AMP cyclohydrolase compare
Atu0017 -5.8 -4.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1850 -5.8 -6.8 phosphoribosylformylglycinamidine synthetase II compare
Atu0678 -5.7 -5.6 histidyl-tRNA synthetase compare
Atu2791 -5.7 -10.2 3-isopropylmalate dehydrogenase compare
Atu1688 -5.6 -7.7 indole-3-glycerol-phosphate synthase compare
Atu2289 -5.5 -21.1 anthranilate synthase component I and II compare
Atu1205 -5.5 -16.6 threonine dehydratase compare
Atu2264 -5.5 -15.7 2-isopropylmalate synthase compare
Atu2040 -5.4 -6.4 phosphoserine phosphatase compare
Atu3739 -5.3 -3.1 phosphoglycerate kinase compare
Atu0099 -5.3 -15.6 prephenate dehydratase compare
Atu0400 -5.3 -7.2 orotate phosphoribosyltransferase compare
Atu2709 -5.2 -21.3 3-isopropylmalate dehydratase, large subunit compare
Atu1307 -5.2 -8.2 dihydroorotase compare
Atu0399 -5.2 -9.3 dihydroorotase compare
Atu1687 -5.1 -14.0 anthranilate phosphoribosyltransferase compare
Atu3706 -5.1 -11.4 D-3-phosphoglycerate dehydrogenase compare
Atu0679 -5.0 -6.6 ATP phosphoribosyltransferase compare
Atu0041 -5.0 -3.4 glutamine amidotransferase compare
Atu0537 -5.0 -9.5 histidinol dehydrogenase compare
Atu0035 -4.9 -13.2 phosphoenolpyruvate carboxykinase compare
Atu2718 -4.9 -10.4 homoserine O-succinyltransferase compare
Atu1075 -4.9 -9.2 amidophosphoribosyltransferase compare
Atu3740 -4.7 -10.7 fructose bisphosphate aldolase compare
Atu0298 -4.7 -11.4 orotidine 5 compare
Atu3707 -4.4 -5.0 phosphoserine aminotransferase compare
Atu0432 -4.4 -8.2 O-succinylhomoserine sulfhydrylase compare
Atu0486 -4.4 -6.9 dihydroorotate dehydrogenase compare
Atu2036 -4.4 -18.1 acetolactate synthase III, large subunit compare
Atu1141 -4.2 -11.2 Phosphoribosylglycinamide synthetase compare
Atu1588 -4.1 -10.2 homoserine dehydrogenase compare
Atu0039 -4.1 -3.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu4505 -4.0 -10.7 LacI family transcriptional regulator compare
Atu1030 -3.8 -2.7 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2790 -3.8 -4.0 3-isopropylmalate dehydratase, small subunit compare
Atu1308 -3.8 -6.2 aspartate carbamoyl transferase catalytic subunit compare
Atu1845 -3.8 -5.5 phosphoribosylformylglycinamidine synthase I compare
Atu1140 -3.7 -4.5 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2650 -3.5 -13.3 glycerol-3-phosphate dehydrogenase compare
Atu3885 -3.5 -9.7 inositol monophosphatase compare
Atu0043 -3.5 -3.0 imidazoleglycerol-phosphate dehydratase compare
Atu0647 -3.5 -9.4 phosphoribosylamine--glycine ligase compare
Atu3755 -3.5 -6.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0803 -3.4 -21.1 pyruvate,orthophosphate dikinase compare
Atu3754 -3.4 -11.6 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0047 -3.4 -18.6 malate synthase G compare
Atu2225 -3.3 -12.3 transcriptional regulator compare
Atu1620 -3.2 -15.2 triosephosphate isomerase compare
Atu0040 -3.2 -1.9 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3469 -3.0 -4.0 phosphoglyceromutase compare
Atu0608 -3.0 -17.0 transcriptional regulator compare
Atu0607 -3.0 -18.0 isocitrate lyase compare
Atu0536 -2.9 -10.1 hypothetical protein compare
Atu2745 -2.9 -15.6 acetyl-coenzyme A synthetase compare
Atu3482 -2.9 -11.8 pantoate--beta-alanine ligase compare
Atu0723 -2.9 -3.1 FAD dependent oxidoreductase compare
Atu4773 -2.7 -2.7 two component response regulator compare
Atu2747 -2.6 -13.1 hypothetical protein compare
Atu2684 -2.6 -3.8 hypothetical protein compare
Atu4711 -2.4 -8.4 two component sensor kinase compare
Atu3483 -2.4 -5.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1359 -2.3 -1.9 dnaK deletion suppressor protein compare
Atu1810 -2.2 -1.7 hypothetical protein compare
Atu2015 -2.2 -10.8 aminotransferase compare
Atu1589 -2.1 -9.7 aminotransferase, class I compare
Atu1686 -2.1 -13.1 peptidyl-prolyl cis-trans isomerse D compare
Atu0606 -2.0 -2.6 hypothetical protein compare
Atu3731 -1.9 -8.2 5-formyltetrahydrofolate cyclo-ligase compare
Atu2224 -1.9 -8.9 aldehyde dehydrogenase conserved
Atu2554 -1.8 -2.3 lysyl-tRNA synthetase compare
Atu3783 -1.8 -12.3 glutamate synthase subunit beta compare
Atu2115 -1.7 -9.4 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu0626 -1.7 -10.3 alcohol dehydrogenase compare
Atu1463 -1.7 -5.7 glycine cleavage system component H compare
Atu0769 -1.6 -1.7 protoheme IX farnesyltransferase compare
Atu1462 -1.6 -9.7 glycine cleavage system protein P2 compare
Atu1464 -1.6 -5.9 glycine cleavage system T protein, aminomethyltransferase compare
Atu3763 -1.6 -2.0 hypothetical protein compare
Atu2155 -1.5 -11.4 methionine synthase compare
Atu1456 -1.5 -7.8 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu4096 -1.5 -6.7 nicotinate-nucleotide pyrophosphorylase compare
Atu4317 -1.5 -5.6 TetR family transcriptional regulator compare
Atu2207 -1.5 -2.3 two component sensor kinase compare
Atu3120 -1.4 -1.6 hypothetical protein compare
Atu0029 -1.4 -4.4 S-adenosylhomocysteine hydrolase compare
Atu4502 -1.4 -7.0 cobalamin synthesis protein compare
Atu1446 -1.4 -3.5 two component response regulator compare
Atu5125 -1.4 -6.1 GntR family transcriptional regulator compare
Atu3784 -1.4 -11.6 glutamate synthase large subunit compare
Atu0062 -1.3 -7.3 transcriptional regulator, ROK family compare
Atu4098 -1.3 -7.5 quinolinate synthetase compare
Atu6114 -1.3 -2.8 hypothetical protein compare
Atu2368 -1.2 -1.7 hypothetical protein compare
Atu0031 -1.1 -1.5 PTS system, IIA component compare
Atu1028 -1.1 -2.4 hypothetical protein compare
Atu0030 -1.1 -1.8 phosphocarrier protein HPr compare
Atu0664 -1.1 -7.5 transcriptional regulator, LysR family compare
Atu4161 -1.1 -2.5 hypothetical protein compare
Atu1566 -1.1 -1.3 hypothetical protein compare
Atu4616 -1.1 -1.8 dTDP-4-dehydrorhamnose reductase compare
Atu2548 -1.1 -7.7 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0876 -1.1 -1.7 superoxide dismutase compare
Atu0205 -1.1 -6.6 methylmalonate-semialdehyde dehydrogenase compare
Atu4097 -1.1 -5.8 L-aspartate oxidase compare
Atu1454 -1.0 -4.6 siroheme synthase compare
Atu1748 -1.0 -7.1 NIFU-like protein compare
Atu1952 -1.0 -1.3 hypothetical protein compare
Atu0894 -1.0 -2.0 ABC transporter, membrane spanning protein compare
Atu0434 -1.0 -3.0 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu5451 -0.9 -1.8 hypothetical protein compare
Atu0641 -0.9 -3.5 hypothetical protein compare
Atu0331 -0.9 -2.1 sigma-54 modulation protein compare
Atu1904 -0.9 -2.9 transcriptional regulator compare
Atu3162 -0.9 -4.9 LacI family transcriptional regulator compare
Atu3910 -0.9 -3.0 LamB/YcsF family protein compare
Atu1685 -0.9 -1.1 hypothetical protein compare
Atu3486 -0.9 -2.1 DeoR family transcriptional regulator compare
Atu1286 -0.9 -2.9 hypothetical protein compare
Atu0422 -0.9 -2.4 ABC transporter, membrane spanning protein compare
Atu0663 -0.9 -5.7 hypothetical protein compare
Atu2821 -0.8 -2.6 transcriptional regulator, GntR family compare
Atu1457 -0.8 -2.6 hypothetical protein compare
Atu8115 -0.8 -3.5 Hypothetical Protein compare
Atu4614 -0.8 -5.1 glycosyltransferase compare
Atu0977 -0.8 -3.0 serine protease DO-like protease compare
Atu2209 -0.8 -2.4 pyrroline-5-carboxylate reductase compare
Atu1455 -0.8 -2.5 hypothetical protein compare
Atu3005 -0.8 -1.2 hypothetical protein compare
Atu4501 -0.8 -4.6 hypothetical protein compare
Atu4541 -0.8 -3.7 carboxymuconolactone decarboxylase compare
Atu2441 -0.8 -2.1 RNA methylase compare
Atu3429 -0.8 -1.3 hypothetical protein compare
Atu0354 -0.8 -1.9 ferric uptake regulator compare
Atu2633 -0.8 -1.8 RhtB family transporter compare
Atu2205 -0.8 -4.2 transcriptional regulator, MarR family compare
Atu0690 -0.8 -2.2 hypothetical protein compare
Atu1439 -0.7 -1.8 hypothetical protein compare
Atu0189 -0.7 -2.3 ABC transporter, membrane spanning protein (peptide) compare
Atu1225 -0.7 -1.8 hypothetical protein compare
Atu4792 -0.7 -2.0 hypothetical protein compare
Atu3337 -0.7 -4.0 LacI family transcriptional regulator compare
Atu0188 -0.7 -1.8 ABC transporter, membrane spanning protein (peptide) compare
Atu2020 -0.7 -1.8 transcriptional regulator, TetR family compare
Atu4674 -0.7 -4.8 GntR family transcriptional regulator compare
Atu3353 -0.7 -4.6 mannose-1-phosphate guanylyltransferase compare
Atu0777 -0.7 -0.9 hypothetical protein compare
Atu0886 -0.7 -1.2 hypothetical protein compare
Atu0401 -0.7 -3.8 fructokinase compare
Atu0983 -0.7 -1.2 hypothetical protein compare
Atu4446 -0.7 -4.4 hypothetical protein compare
Atu0101 -0.7 -3.5 cytochrome c compare
Atu0190 -0.7 -2.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4825 -0.6 -2.6 dehydrogenase compare
Atu4364 -0.6 -2.9 LacI family transcriptional regulator compare
Atu4887 -0.6 -2.1 hypothetical protein compare
Atu3095 -0.6 -2.5 hypothetical protein compare
Atu3579 -0.6 -2.8 lactoylglutathione lyase compare
Atu4017 -0.6 -4.7 MFS permease compare
Atu3908 -0.6 -4.3 GntR family transcriptional regulator compare
Atu2192 -0.6 -1.1 hypothetical protein compare
Atu2376 -0.6 -0.5 hypothetical protein compare
Atu2238 -0.6 -3.3 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu3014 -0.6 -1.3 hypothetical protein compare
Atu1889 -0.6 -1.2 diacylglycerol kinase compare
Atu1774 -0.6 -3.0 ABC transporter, substrate binding protein (peptide) compare
Atu2063 -0.6 -1.7 hypothetical protein compare
Atu2017 -0.6 -0.8 hypothetical protein compare
Atu0149 -0.6 -1.5 enoyl-(acyl-carrier-protein) reductase compare
Atu4166 -0.6 -1.5 UDP-glucose 4-epimerase compare
Atu4469 -0.6 -2.0 iron ABC transporter permease compare
Atu0119 -0.6 -0.9 hypothetical protein compare
Atu1701 -0.6 -1.3 protein-L-isoaspartate O-methyltransferase compare
Atu3572 -0.6 -3.0 transcriptional regulator compare
Atu3521 -0.6 -2.7 permease compare
Atu4618 -0.6 -3.3 dTDP-rhamnose-3,5-epimerase compare
Atu0972 -0.6 -3.0 lipA protein compare
Atu3963 -0.6 -4.1 GntR family transcriptional regulator compare
Atu3289 -0.6 -1.9 thiamine-phosphate pyrophosphorylase compare
Atu0702 -0.6 -1.3 calcium-binding protein, regucalcin compare
Atu3732 -0.6 -3.1 hemolysin compare
Atu8165 -0.6 -1.3 hypothetical protein compare
Atu0660 -0.6 -2.6 hydrolase compare
Atu0346 -0.6 -1.2 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0501 -0.6 -4.3 acyl-CoA dehydrogenase compare
Atu2494 -0.6 -3.9 NAD(P)+ transhydrogenase beta chain compare
Atu2237 -0.5 -2.5 cytochrome c1 compare
Atu5045 -0.5 -0.9 hypothetical protein compare
Atu2798 -0.5 -2.6 precorrin-6y methyltransferase compare
Atu8088 -0.5 -1.0 hypothetical protein compare
Atu4486 -0.5 -2.4 nitroreductase compare
Atu2799 -0.5 -1.9 precorrin-6x reductase compare
Atu2183 -0.5 -3.2 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu2270 -0.5 -1.1 ATP-dependent Clp protease, proteolytic subunit compare
Atu2793 -0.5 -2.3 cobyrinic acid a,c-diamide synthase compare
Atu2131 -0.5 -3.2 hypothetical protein compare
Atu0893 -0.5 -2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu2746 -0.5 -1.2 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source a-Ketoglutaric acid disodium salt hydrate in Agrobacterium fabrum C58

For carbon source a-Ketoglutaric acid disodium salt hydrate across organisms