Experiment set10IT043 for Agrobacterium fabrum C58

Compare to:

4-Hydroxybenzoic Acid carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu3001 +1.3 3.0 hypothetical protein compare
Atu3012 +1.2 2.5 hypothetical protein compare
Atu4896 +1.1 2.4 acetyltransferase compare
Atu0142 +1.0 3.3 cytochrome o ubiquinol oxidase subunit II compare
Atu0225 +1.0 1.6 hypothetical protein compare
Atu1836 +1.0 2.6 hypothetical protein compare
Atu2787 +1.0 1.6 hypothetical protein compare
Atu1291 +1.0 3.6 hypothetical protein compare
Atu0141 +0.9 1.1 cytochrome O ubiquinol oxidase subunit I compare
Atu4223 +0.8 1.9 sarcosine oxidase delta subunit compare
Atu3468 +0.8 1.0 hypothetical protein compare
Atu1333 +0.8 3.2 outer membrane protein compare
Atu2433 +0.8 1.5 hypothetical protein compare
Atu1847 +0.7 2.1 hypothetical protein compare
Atu0572 +0.7 2.2 hypothetical protein compare
Atu2657 +0.6 1.8 hypothetical protein compare
Atu1241 +0.6 2.8 hypothetical protein compare
Atu1694 +0.6 2.5 hypothetical protein compare
Atu4897 +0.6 1.1 hypothetical protein compare
Atu0524 +0.6 2.9 transcriptional regulator, LuxR family compare
Atu1387 +0.6 2.2 transcriptional regulator, GntR family compare
Atu2286 +0.6 1.5 hypothetical protein compare
Atu8202 +0.6 1.7 hypothetical protein compare
Atu8200 +0.6 2.9 hypothetical protein compare
Atu4133 +0.6 2.4 hypothetical protein compare
Atu0115 +0.5 0.9 hypothetical protein compare
Atu0419 +0.5 1.4 two component sensor kinase compare
Atu1327 +0.5 2.4 NADH-ubiquinone oxidoreductase compare
Atu0645 +0.5 1.0 hypothetical protein compare
Atu1897 +0.5 3.0 short chain dehydrogenase compare
Atu8191 +0.5 1.2 hypothetical protein compare
Atu0525 +0.5 3.4 transcriptional regulator, LuxR family compare
Atu1302 +0.5 1.8 hypothetical protein compare
Atu1660 +0.5 1.6 hypothetical protein compare
Atu2442 +0.5 1.9 hypothetical protein compare
Atu5034 +0.5 1.2 hypothetical protein compare
Atu2200 +0.5 1.8 cold shock protein compare
Atu4680 +0.5 2.4 amino acid ABC transporter permease compare
Atu1351 +0.5 1.1 hypothetical protein compare
Atu1699 +0.5 1.6 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu3598 +0.5 1.4 thiol:disulfide interchange protein compare
Atu4144 +0.5 0.7 hypothetical protein compare
Atu0924 +0.5 1.7 hypothetical protein compare
Atu2591 +0.5 3.2 glucosyltransferase compare
Atu0386 +0.5 1.2 hypothetical protein compare
Atu2450 +0.5 1.7 hypothetical protein compare
Atu0236 +0.5 1.4 hypothetical protein compare
Atu3006 +0.5 1.7 hypothetical protein compare
Atu0488 +0.5 2.0 hypothetical protein compare
Atu0749 +0.4 1.8 biotin synthesis BioY protein compare
Atu1853 +0.4 1.7 hypothetical protein compare
Atu1559 +0.4 1.4 hypothetical protein compare
Atu5115 +0.4 1.1 hypothetical protein compare
Atu3329 +0.4 3.4 beta alanine--pyruvate transaminase compare
Atu2526 +0.4 1.6 hypothetical protein compare
Atu1865 +0.4 1.5 hypothetical protein compare
Atu1747 +0.4 1.1 hypothetical protein compare
Atu1184 +0.4 1.7 hypothetical protein compare
Atu4290 +0.4 1.6 hypothetical protein compare
Atu1251 +0.4 3.0 O-acetylhomoserine sulfhydrylase compare
Atu1968 +0.4 1.0 hypothetical protein compare
Atu3667 +0.4 1.4 aspartate alpha-decarboxylase compare
Atu2399 +0.4 2.5 hypothetical protein compare
Atu0662 +0.4 2.1 transcriptional regulator, GntR family compare
Atu3076 +0.4 2.1 uracil transport protein compare
Atu0941 +0.4 0.6 hypothetical protein compare
Atu0640 +0.4 1.5 hypothetical protein compare
Atu0859 +0.4 1.2 hypothetical protein compare
Atu3631 +0.4 2.3 hypothetical protein compare
Atu3052 +0.4 2.0 MarR family transcriptional regulator compare
Atu4819 +0.4 1.4 hypothetical protein compare
Atu0836 +0.4 1.0 Glutathione-S-transferase compare
Atu4452 +0.4 1.6 hypothetical protein compare
Atu3827 +0.4 2.1 LysR family transcriptional regulator compare
Atu1150 +0.4 2.1 hypothetical protein compare
Atu3613 +0.4 2.0 hypothetical protein compare
Atu0074 +0.4 2.7 molybdopterin biosynthesis protein compare
Atu4061 +0.4 1.6 exopolysaccharide production repressor protein compare
Atu0556 +0.4 2.5 hypothetical protein compare
Atu2041 +0.4 1.0 acetyltransferase compare
Atu2343 +0.4 1.5 acetyltransferase compare
Atu5107 +0.4 2.0 hypothetical protein compare
Atu0280 +0.4 1.2 hypothetical protein compare
Atu1565 +0.4 1.6 serine acetyltransferase compare
Atu5121 +0.4 3.2 two component response regulator compare
Atu0554 +0.4 2.0 flagellar basal-body rod protein compare
Atu4894 +0.4 2.0 transposase compare
Atu1346 +0.4 1.5 phenazine antibiotic biosynthesis related protein compare
Atu4893 +0.4 1.8 hypothetical protein compare
Atu0594 +0.4 3.0 alpha-glucosidase compare
Atu8018 +0.4 0.6 hypothetical protein compare
Atu4524 +0.4 2.0 oligopeptide ABC transporter permease compare
Atu4149 +0.4 2.8 UDP-glucose 6-dehydrogenase compare
Atu0592 +0.4 2.4 ABC transporter, membrane spanning protein compare
Atu0595 +0.4 2.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu2130 +0.4 1.9 hypothetical protein compare
Atu1004 +0.4 1.3 hypothetical protein compare
Atu1466 +0.4 1.0 hypothetical protein compare
Atu2044 +0.4 1.4 HFLC protein compare
Atu2290 +0.4 2.1 probable acetyltransferase compare
Atu2135 +0.4 2.0 transcriptional regulator, TetR family compare
Atu4733 +0.4 2.4 hypothetical protein compare
Atu0265 +0.4 2.1 hydrolase compare
Atu8032 +0.4 1.1 hypothetical protein compare
Atu4387 +0.4 2.1 nitric oxide reductase NorQ protein compare
Atu5408 +0.4 2.4 ABC transporter membrane spanning protein (amino acid) compare
Atu3775 +0.4 1.4 hypothetical protein compare
Atu1226 +0.4 2.1 exoD protein compare
Atu2646 +0.4 0.8 hypothetical protein compare
Atu3647 +0.3 1.2 hypothetical protein compare
Atu1483 +0.3 1.5 cytochrome b561 compare
Atu2677 +0.3 1.4 protein tyrosine phosphatase compare
Atu1137 +0.3 2.2 NTP pyrophosphohydrolase, MutT family compare
Atu4458 +0.3 1.5 hypothetical protein compare
Atu1952 +0.3 0.8 hypothetical protein compare
Atu5188 +0.3 2.2 zinc-binding dehydrogenase compare
Atu2166 +0.3 1.7 hypothetical protein compare
Atu0179 +0.3 2.1 hypothetical protein compare
Atu4117 +0.3 1.3 dipeptide ABC transporter ATPase compare
Atu1818 +0.3 0.6 hypothetical protein compare
Atu2462 +0.3 1.2 hypothetical protein compare
Atu4141 +0.3 1.6 hypothetical protein compare
Atu3492 +0.3 1.0 sugar kinase compare
Atu1888 +0.3 2.7 two component sensor kinase compare
Atu8185 +0.3 1.2 hypothetical protein compare
Atu2105 +0.3 1.9 hypothetical protein compare
Atu5169 +0.3 1.6 type IV secretion protein AvhB8 compare
Atu4515 +0.3 2.1 branched chain amino acid ABC transporter ATPase compare
Atu4787 +0.3 1.7 inositol monophosphatase compare
Atu1895 +0.3 2.5 3, 4-dihydroxy-2-butanone 4-phosphate synthase compare
Atu8061 +0.3 2.2 hypothetical protein compare
Atu2258 +0.3 1.8 acetyltransferase compare
Atu0119 +0.3 0.6 hypothetical protein compare
Atu2788 +0.3 1.5 citrate lyase, beta subunit compare
Atu4187 +0.3 0.6 tRNA-Met compare
Atu4648 +0.3 2.2 choline sulfatase compare
Atu1320 +0.3 1.5 acetyltransferase compare
Atu1068 +0.3 1.9 hypothetical protein compare
Atu3578 +0.3 1.6 glycerol-3-phosphate dehydrogenase compare
Atu0886 +0.3 0.6 hypothetical protein compare
Atu1534 +0.3 1.9 cytochrome-c oxidase, FixP chain compare
Atu2620 +0.3 0.7 hypothetical protein compare
Atu1388 +0.3 2.4 ABC transporter, substrate binding protein (amino acid) compare
Atu3089 +0.3 1.4 spermidine/putrescine ABC transporter ATPase compare
Atu0666 +0.3 1.5 glycolate oxidase subunit compare
Atu0530 +0.3 2.1 UDP-galactose 4-epimerase compare
Atu0063 +0.3 1.1 ABC transporter, substrate binding protein (sugar) compare
Atu5144 +0.3 1.9 putative peptidase compare
Atu1643 +0.3 1.6 hypothetical protein compare
Atu2220 +0.3 1.6 hypothetical protein compare
Atu0561 +0.3 2.1 flagellar motor switch protein compare
Atu2590 +0.3 2.0 hypothetical protein compare
Atu4210 +0.3 2.1 sugars ABC transporter permease compare
Atu4662 +0.3 1.4 oligopeptide ABC transporter permease compare
Atu0535 +0.3 1.1 hypothetical protein compare
Atu4646 +0.3 1.7 LysR family transcriptional regulator compare
Atu4824 +0.3 1.8 IclR family transcriptional regulator compare
Atu1005 +0.3 1.2 hypothetical protein compare
Atu1127 +0.3 0.9 molybdopterin converting factor small subunit compare
Atu2169 +0.3 1.2 hypothetical protein compare
Atu5112 +0.3 1.6 hypothetical protein compare
Atu2614 +0.3 1.6 hypothetical protein compare
Atu3145 +0.3 1.5 pectin degradation protein compare
Atu3632 +0.3 1.6 hypothetical protein compare
Atu3871 +0.3 1.4 L-lactate dehydrogenase compare
Atu3153 +0.3 1.8 AraC family transcriptional regulator compare
Atu4042 +0.3 2.0 hypothetical protein compare
Atu0815 +0.3 0.9 hypothetical protein compare
Atu0832 +0.3 2.0 chloride channel protein compare
Atu2630 +0.3 1.8 hypothetical protein compare
Atu2215 +0.3 1.6 hypothetical protein compare
Atu4753 +0.3 1.0 amino acid ABC transporter permease compare
Atu0936 +0.3 1.2 methyltransferase compare
Atu3823 +0.3 1.8 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase compare
Atu0871 +0.3 1.3 branched-chain-amino-acid aminotransferase compare
Atu3623 +0.3 0.9 DnaJ family molecular chaperone compare
Atu2317 +0.3 1.3 hypothetical protein compare
Atu3127 +0.3 1.6 acetyltransferase compare
Atu1682 +0.3 1.4 hypothetical protein compare
Atu8197 +0.3 1.8 NorF protein compare
Atu1884 +0.3 1.1 ABC transporter, substrate binding protein (aliphatic sulfonate) compare
Atu1634 +0.3 0.8 hypothetical protein compare
Atu5421 +0.3 1.7 ABC transporter membrane spanning protein (putrescine) compare
Atu1136 +0.3 2.3 reductase compare
Atu0693 +0.3 1.8 PmbA/TldD related protein compare
Atu5052 +0.3 1.6 small heat shock protein compare
Atu1397 +0.3 1.7 ABC transporter, membrane spanning protein (amino acid) compare
Atu0841 +0.3 1.9 hypothetical protein compare
Atu0630 +0.3 0.9 hypothetical protein compare
Atu2649 +0.3 1.2 hypothetical protein compare
Atu2474 +0.3 2.2 ABC transporter, membrane spanning protein compare
Atu4607 +0.3 1.7 sugar acetylase compare
Atu1475 +0.3 0.9 hypothetical protein compare
Atu1329 +0.3 1.2 leucyl/phenylalanyl-tRNA-protein transferase compare
Atu5425 +0.3 1.8 2-hydroxychromene-2-carboxylate isomerase compare
Atu1737 +0.3 0.9 hypothetical protein compare
Atu0999 +0.3 1.5 magnesium transport protein compare
Atu5028 +0.3 0.9 IS426 transposase compare
Atu3124 +0.3 1.1 hypothetical protein compare
Atu3842 +0.3 1.7 hypothetical protein compare


Specific Phenotypes

For 11 genes in this experiment

For carbon source 4-Hydroxybenzoic Acid in Agrobacterium fabrum C58

For carbon source 4-Hydroxybenzoic Acid across organisms