Experiment set10IT042 for Agrobacterium fabrum C58

Compare to:

4-Hydroxybenzoic Acid carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu6131 +1.2 7.3 TraR Antiactivator compare
Atu3598 +1.0 1.6 thiol:disulfide interchange protein compare
Atu1573 +0.9 2.1 hypothetical protein compare
Atu1836 +0.9 2.7 hypothetical protein compare
Atu0769 +0.9 1.8 protoheme IX farnesyltransferase compare
Atu0809 +0.9 2.5 hypothetical protein compare
Atu0836 +0.8 3.1 Glutathione-S-transferase compare
Atu0925 +0.8 3.8 hypothetical protein compare
Atu4896 +0.8 1.7 acetyltransferase compare
Atu1818 +0.7 2.6 hypothetical protein compare
Atu3663 +0.7 2.0 hypothetical protein compare
Atu5517 +0.7 3.4 hypothetical protein compare
Atu0926 +0.7 2.7 hypothetical protein compare
Atu0976 +0.7 3.4 cycL protein compare
Atu4133 +0.7 2.2 hypothetical protein compare
Atu3001 +0.7 1.5 hypothetical protein compare
Atu0533 +0.6 1.4 putative inhibitor of septum formation compare
Atu0931 +0.6 4.9 penicillin binding protein compare
Atu5121 +0.6 5.0 two component response regulator compare
Atu1327 +0.6 1.7 NADH-ubiquinone oxidoreductase compare
Atu3468 +0.6 0.7 hypothetical protein compare
Atu0026 +0.6 1.0 hypothetical protein compare
Atu0966 +0.6 1.6 hypothetical protein compare
Atu0795 +0.6 1.6 hypothetical protein compare
Atu3182 +0.6 2.4 hypothetical protein compare
Atu1175 +0.6 1.5 hypothetical protein compare
Atu1492 +0.6 1.4 transcriptional regulator, ArsR family compare
Atu0544 +0.6 1.2 hypothetical protein compare
Atu0115 +0.6 0.9 hypothetical protein compare
Atu8161 +0.6 1.3 hypothetical protein compare
Atu5164 +0.6 1.0 type IV secretion protein AvhB3 compare
Atu2450 +0.5 1.9 hypothetical protein compare
Atu8156 +0.5 1.9 hypothetical protein compare
Atu1968 +0.5 1.3 hypothetical protein compare
Atu1466 +0.5 1.0 hypothetical protein compare
Atu0525 +0.5 2.9 transcriptional regulator, LuxR family compare
Atu0786 +0.5 2.9 peptidase, family M16 compare
Atu0885 +0.5 2.1 hypothetical protein compare
Atu3697 +0.5 1.8 ATP-dependent protease LA 2 compare
Atu3009 +0.5 0.8 exopolysaccharide production protein compare
Atu8154 +0.5 1.4 Plasmid stabilization system protein compare
Atu4200 +0.5 2.1 hypothetical protein compare
Atu2075 +0.5 2.5 chemotaxis protein compare
Atu6189 +0.4 1.0 protein secretion chaperone compare
Atu0386 +0.4 1.2 hypothetical protein compare
Atu1149 +0.4 1.1 adenylate cyclase compare
Atu1501 +0.4 2.3 hypothetical protein compare
Atu4516 +0.4 2.0 branched chain amino acid ABC transporter ATPase compare
Atu8150 +0.4 2.2 hypothetical protein compare
Atu1565 +0.4 1.8 serine acetyltransferase compare
Atu4452 +0.4 1.8 hypothetical protein compare
Atu5028 +0.4 2.0 IS426 transposase compare
Atu3864 +0.4 2.4 hypothetical protein compare
Atu4406 +0.4 0.9 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu4519 +0.4 2.9 branched amino acid ABC transporter substrate-binding protein compare
Atu0812 +0.4 1.5 hypothetical protein compare
Atu3365 +0.4 1.9 hypothetical protein compare
Atu0562 +0.4 1.5 flagellar motor switch protein FliN compare
Atu5157 +0.4 2.1 hypothetical protein compare
Atu5169 +0.4 2.2 type IV secretion protein AvhB8 compare
Atu1566 +0.4 0.7 hypothetical protein compare
Atu3653 +0.4 2.2 hypothetical protein compare
Atu0479 +0.4 1.9 ABC transporter, substrate binding protein (amino acid) compare
Atu4779 +0.4 1.1 hypothetical protein compare
Atu4149 +0.4 2.8 UDP-glucose 6-dehydrogenase compare
Atu0912 +0.4 0.9 Na+/H+ antiporter compare
Atu4527 +0.4 0.9 hypothetical protein compare
Atu1361 +0.4 1.5 hypothetical protein compare
Atu1470 +0.4 0.6 Camphor resistance protein compare
Atu2258 +0.4 2.1 acetyltransferase compare
Atu1868 +0.4 2.3 tRNA/rRNA methyltransferase compare
Atu8179 +0.4 2.4 hypothetical protein compare
Atu4162 +0.4 2.5 two-component response regulator compare
Atu2657 +0.4 1.5 hypothetical protein compare
Atu1499 +0.4 2.4 penicillin binding protein conserved
Atu8202 +0.4 1.7 hypothetical protein compare
Atu8056 +0.4 0.7 hypothetical protein compare
Atu0580 +0.4 0.9 flagellar biosynthetic protein compare
Atu5513 +0.4 1.2 cold shock protein compare
Atu1333 +0.4 1.4 outer membrane protein compare
Atu4242 +0.4 2.4 hypothetical protein compare
Atu0559 +0.4 1.8 hypothetical protein compare
Atu1546 +0.4 1.8 transcriptional regulator, MerR family compare
Atu2248 +0.4 1.9 hypothetical protein compare
Atu4498 +0.4 2.2 hypothetical protein compare
Atu5437 +0.4 2.0 hypothetical protein compare
Atu0322 +0.4 1.8 enoyl CoA hydratase compare
Atu0524 +0.4 2.0 transcriptional regulator, LuxR family compare
Atu0591 +0.4 2.7 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu1068 +0.4 1.9 hypothetical protein compare
Atu1354 +0.4 0.7 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu1039 +0.3 1.7 DNA repair protein RecO compare
Atu4407 +0.3 0.7 periplasmic nitrate reductase, NapD protein compare
Atu1591 +0.3 1.9 hypothetical protein compare
Atu6165 +0.3 0.8 hypothetical protein compare
Atu0236 +0.3 1.0 hypothetical protein compare
Atu5538 +0.3 1.7 hypothetical protein compare
Atu4671 +0.3 0.9 response regulator compare
Atu2044 +0.3 1.3 HFLC protein compare
Atu8144 +0.3 1.1 hypothetical protein compare
Atu2590 +0.3 2.4 hypothetical protein compare
Atu2316 +0.3 1.6 hypothetical protein compare
Atu3652 +0.3 2.1 hypothetical protein compare
Atu0577 +0.3 0.9 FLAF protein compare
Atu1701 +0.3 0.7 protein-L-isoaspartate O-methyltransferase compare
Atu3130 +0.3 2.1 sugar ABC transporter substrate-binding protein compare
Atu3648 +0.3 2.0 hypothetical protein compare
Atu4607 +0.3 1.7 sugar acetylase compare
Atu2231 +0.3 1.9 acetyltransferase compare
Atu1971 +0.3 1.2 hypothetical protein compare
Atu3657 +0.3 2.2 hypothetical protein compare
Atu1847 +0.3 0.9 hypothetical protein compare
Atu4690 +0.3 1.6 amino acid ABC transporter ATPase/permease compare
Atu0730 +0.3 1.8 hypothetical protein compare
Atu1871 +0.3 1.5 glutathione S-transferase compare
Atu1606 +0.3 1.4 methionine aminopeptidase compare
Atu8185 +0.3 1.4 hypothetical protein compare
Atu2573 +0.3 1.7 hypothetical protein compare
Atu4414 +0.3 2.0 bacteriocin ABC transporter permease compare
Atu3827 +0.3 1.9 LysR family transcriptional regulator compare
Atu8019 +0.3 1.0 hypothetical protein compare
Atu0593 +0.3 2.2 ABC transporter, membrane spanning protein compare
Atu1500 +0.3 1.7 rare lipoprotein A compare
Atu4290 +0.3 0.9 hypothetical protein compare
Atu0276 +0.3 1.4 hypothetical protein compare
Atu3428 +0.3 1.4 hypothetical protein compare
Atu2235 +0.3 1.1 hypothetical protein compare
Atu3567 +0.3 1.4 hypothetical protein compare
Atu8176 +0.3 0.8 hypothetical protein compare
Atu2614 +0.3 1.6 hypothetical protein compare
Atu3861 +0.3 1.7 acyl-CoA hydrolase compare
Atu3530 +0.3 2.3 mannitol dehydrogenase compare
Atu4897 +0.3 0.5 hypothetical protein compare
Atu3886 +0.3 2.0 lysophospholipase compare
Atu0961 +0.3 1.4 hypothetical protein compare
Atu8082 +0.3 1.0 hypothetical protein compare
Atu4303 +0.3 1.4 hypothetical protein compare
Atu0780 +0.3 1.9 hypothetical protein compare
Atu0879 +0.3 1.5 RhtB family transporter compare
Atu0907 +0.3 1.4 Phosphinothricin acetyltransferase compare
Atu4515 +0.3 1.6 branched chain amino acid ABC transporter ATPase compare
Atu2452 +0.3 1.4 hypothetical protein compare
Atu2057 +0.3 0.7 DNA helicase II compare
Atu2583 +0.3 2.1 glycosyltransferase compare
Atu5046 +0.3 1.7 hypothetical protein compare
Atu4646 +0.3 1.8 LysR family transcriptional regulator compare
Atu0764 +0.3 1.8 hypothetical protein compare
Atu4811 +0.3 1.6 UDP-phosphate alpha N-acetylglucosaminyltransferase compare
Atu8039 +0.3 1.3 hypothetical protein compare
Atu3329 +0.3 1.6 beta alanine--pyruvate transaminase compare
Atu4220 +0.3 1.8 short-chain dehydrogenase compare
Atu0594 +0.3 2.1 alpha-glucosidase compare
Atu2620 +0.3 0.6 hypothetical protein compare
Atu4506 +0.3 1.4 hypothetical protein compare
Atu1702 +0.3 1.5 stationary-phase survival protein compare
Atu4705 +0.3 1.0 LysR family transcriptional regulator compare
Atu0631 +0.3 1.4 molybdenum cofactor biosynthesis protein B compare
Atu6138 +0.3 1.2 Repressor of the acc and arc operons compare
Atu3071 +0.3 1.3 hypothetical protein compare
Atu1518 +0.3 1.2 transcriptional regulator, Fur family compare
Atu3036 +0.3 0.9 dipeptide ABC transporter permease compare
Atu1529 +0.3 1.3 nitrogen fixation protein FixH compare
Atu1891 +0.3 0.7 cobalamin biosynthesis protein compare
Atu8046 +0.3 1.0 hypothetical protein compare
Atu2591 +0.3 1.8 glucosyltransferase compare
Atu1838 +0.3 1.4 ABC transporter, substrate binding protein (amino acid) compare
Atu2236 +0.3 1.1 adenine phosphoribosyltransferase compare
Atu0555 +0.3 1.9 flagellar basal-body rod protein FlgB compare
Atu4468 +0.3 1.7 iron transport ABC transporter permease compare
Atu0579 +0.3 1.3 hook formation protein compare
Atu4627 +0.3 1.7 hypothetical protein compare
Atu4171 +0.3 1.8 cold-shock dead-box protein A compare
Atu1213 +0.3 0.9 hypothetical protein compare
Atu0346 +0.3 0.4 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1692 +0.3 1.1 hypothetical protein compare
Atu2308 +0.3 1.3 d-beta-hydroxybutyrate dehydrogenase compare
Atu1888 +0.3 1.9 two component sensor kinase compare
Atu0193 +0.3 1.2 glutamine synthetase compare
Atu2169 +0.3 1.3 hypothetical protein compare
Atu0303 +0.3 1.2 hypothetical protein compare
Atu0184 +0.3 0.8 glucokinase compare
Atu2271 +0.3 1.0 urease accessory protein compare
Atu4588 +0.3 1.1 sodium bile acid symporter family protein compare
Atu0772 +0.3 1.8 hypothetical protein compare
Atu1291 +0.3 0.6 hypothetical protein compare
Atu0530 +0.3 1.8 UDP-galactose 4-epimerase compare
Atu4819 +0.3 1.2 hypothetical protein compare
Atu4884 +0.3 0.9 hypothetical protein compare
Atu1858 +0.3 1.4 hypothetical protein compare
Atu1590 +0.3 1.8 inosine-uridine preferring nucleoside hydrolase compare
Atu2384 +0.3 1.4 transcriptional regulator, TetR family compare
Atu3575 +0.3 1.6 xylose ABC transporter permease compare
Atu3270 +0.3 1.3 hypothetical protein compare
Atu3605 +0.3 1.4 hypothetical protein compare
Atu1892 +0.3 0.8 hypothetical protein compare
Atu3340 +0.3 1.9 trehalose/maltose ABC transporter permease compare
Atu3690 +0.3 1.7 iron (III ABC transporter permease dicitrate ABC transporter permease compare
Atu2338 +0.3 1.9 hypothetical protein compare
Atu0755 +0.3 1.0 hypothetical protein compare
Atu1204 +0.3 1.1 potassium uptake protein compare


Specific Phenotypes

For 12 genes in this experiment

For carbon source 4-Hydroxybenzoic Acid in Agrobacterium fabrum C58

For carbon source 4-Hydroxybenzoic Acid across organisms