Experiment set10IT040 for Agrobacterium fabrum C58

Compare to:

2-6-dihydroxybenzoic acid carbon source

200 most important genes:

  gene name fitness t score description  
Atu1845 -5.5 -6.1 phosphoribosylformylglycinamidine synthase I compare
Atu2791 -5.2 -10.0 3-isopropylmalate dehydrogenase compare
Atu0041 -4.6 -3.2 glutamine amidotransferase compare
Atu1359 -4.6 -1.7 dnaK deletion suppressor protein compare
Atu1687 -4.5 -11.1 anthranilate phosphoribosyltransferase compare
Atu2709 -4.4 -15.4 3-isopropylmalate dehydratase, large subunit compare
Atu0039 -4.3 -3.0 imidazoleglycerol-phosphate synthase cyclase compare
Atu2289 -4.3 -17.3 anthranilate synthase component I and II compare
Atu0678 -4.3 -7.1 histidyl-tRNA synthetase compare
Atu3706 -4.1 -11.1 D-3-phosphoglycerate dehydrogenase compare
Atu1850 -4.1 -5.8 phosphoribosylformylglycinamidine synthetase II compare
Atu2264 -4.0 -11.6 2-isopropylmalate synthase compare
Atu1075 -4.0 -6.9 amidophosphoribosyltransferase compare
Atu0432 -3.9 -7.2 O-succinylhomoserine sulfhydrylase compare
Atu0017 -3.9 -4.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0537 -3.8 -7.5 histidinol dehydrogenase compare
Atu1844 -3.7 -3.9 Phosphoribosylformylglycinamidine synthetase compare
Atu1750 -3.7 -5.4 phosphoribosyl c-AMP cyclohydrolase compare
Atu1141 -3.7 -6.8 Phosphoribosylglycinamide synthetase compare
Atu0038 -3.7 -5.0 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0099 -3.7 -9.0 prephenate dehydratase compare
Atu1588 -3.7 -9.1 homoserine dehydrogenase compare
Atu2040 -3.6 -5.8 phosphoserine phosphatase compare
Atu0647 -3.6 -9.7 phosphoribosylamine--glycine ligase compare
Atu3754 -3.6 -5.1 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0679 -3.5 -7.2 ATP phosphoribosyltransferase compare
Atu1205 -3.5 -11.2 threonine dehydratase compare
Atu1140 -3.4 -3.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1620 -3.4 -10.5 triosephosphate isomerase compare
Atu2747 -3.4 -8.8 hypothetical protein compare
Atu3885 -3.4 -9.6 inositol monophosphatase compare
Atu4505 -3.3 -10.9 LacI family transcriptional regulator compare
Atu2036 -3.2 -10.8 acetolactate synthase III, large subunit compare
Atu3740 -3.1 -9.9 fructose bisphosphate aldolase compare
Atu0536 -3.1 -7.2 hypothetical protein compare
Atu2718 -3.0 -7.7 homoserine O-succinyltransferase compare
Atu0040 -3.0 -1.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1688 -3.0 -3.9 indole-3-glycerol-phosphate synthase compare
Atu0043 -2.9 -3.9 imidazoleglycerol-phosphate dehydratase compare
Atu1030 -2.8 -1.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3755 -2.7 -5.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0035 -2.7 -9.3 phosphoenolpyruvate carboxykinase compare
Atu3482 -2.7 -6.6 pantoate--beta-alanine ligase compare
Atu3739 -2.6 -2.6 phosphoglycerate kinase compare
Atu3707 -2.6 -4.0 phosphoserine aminotransferase compare
Atu0803 -2.5 -12.9 pyruvate,orthophosphate dikinase compare
Atu0399 -2.5 -8.1 dihydroorotase compare
Atu4549 -2.5 -9.9 beta-ketoadipyl CoA thiolase compare
Atu2115 -2.5 -9.2 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu5115 -2.5 -2.7 hypothetical protein compare
Atu3784 -2.5 -18.1 glutamate synthase large subunit compare
Atu4547 -2.5 -11.3 3-oxoadipate CoA-transferase subunit A compare
Atu1446 -2.4 -3.1 two component response regulator compare
Atu1589 -2.3 -7.7 aminotransferase, class I compare
Atu3469 -2.3 -3.3 phosphoglyceromutase compare
Atu0486 -2.3 -3.8 dihydroorotate dehydrogenase compare
Atu1463 -2.2 -7.7 glycine cleavage system component H compare
Atu4548 -2.2 -10.1 3-oxoadipate CoA-transferase subunit B compare
Atu1307 -2.2 -6.0 dihydroorotase compare
Atu2015 -2.1 -10.1 aminotransferase compare
Atu3731 -2.1 -6.6 5-formyltetrahydrofolate cyclo-ligase compare
Atu3483 -2.1 -6.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu3783 -2.1 -9.8 glutamate synthase subunit beta compare
Atu4773 -2.1 -3.3 two component response regulator compare
Atu1464 -2.0 -7.6 glycine cleavage system T protein, aminomethyltransferase compare
Atu2790 -2.0 -2.2 3-isopropylmalate dehydratase, small subunit compare
Atu1308 -1.9 -6.8 aspartate carbamoyl transferase catalytic subunit compare
Atu1462 -1.9 -8.7 glycine cleavage system protein P2 compare
Atu3017 -1.9 -2.2 phosphoglyceromutase compare
Atu0047 -1.8 -9.2 malate synthase G compare
Atu2650 -1.8 -11.2 glycerol-3-phosphate dehydrogenase compare
Atu0298 -1.8 -5.2 orotidine 5 compare
Atu2745 -1.8 -10.7 acetyl-coenzyme A synthetase compare
Atu1686 -1.7 -9.8 peptidyl-prolyl cis-trans isomerse D compare
Atu0029 -1.7 -3.8 S-adenosylhomocysteine hydrolase compare
Atu0400 -1.6 -4.9 orotate phosphoribosyltransferase compare
Atu2155 -1.6 -10.1 methionine synthase compare
Atu0723 -1.5 -2.0 FAD dependent oxidoreductase compare
Atu6114 -1.4 -3.0 hypothetical protein compare
Atu2529 -1.4 -5.8 hypothetical protein compare
Atu0677 -1.3 -2.3 hypothetical protein compare
Atu0030 -1.3 -1.6 phosphocarrier protein HPr compare
Atu0422 -1.3 -2.3 ABC transporter, membrane spanning protein compare
Atu2528 -1.3 -5.6 maleylacetate reductase compare
Atu8115 -1.3 -4.4 Hypothetical Protein compare
Atu1454 -1.2 -5.2 siroheme synthase compare
Atu0354 -1.2 -1.6 ferric uptake regulator compare
Atu8025 -1.2 -1.7 hypothetical protein compare
Atu2376 -1.2 -1.1 hypothetical protein compare
Atu0502 -1.2 -5.2 acetyl-CoA acetyltransferase compare
Atu0769 -1.2 -1.3 protoheme IX farnesyltransferase compare
Atu2548 -1.2 -7.7 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu3466 -1.2 -2.5 ArsR family transcriptional regulator compare
Atu3486 -1.1 -2.8 DeoR family transcriptional regulator compare
Atu0419 -1.1 -2.2 two component sensor kinase compare
Atu8018 -1.1 -1.0 hypothetical protein compare
Atu6165 -1.1 -1.2 hypothetical protein compare
Atu4217 -1.1 -1.0 TetR family transcriptional regulator compare
Atu5430 -1.0 -1.5 hypothetical protein compare
Atu0641 -1.0 -3.1 hypothetical protein compare
Atu0503 -1.0 -7.0 enoyl-CoA hydratase compare
Atu4875 -1.0 -3.7 hypothetical protein compare
Atu2234 -1.0 -1.7 hypothetical protein compare
Atu0501 -1.0 -6.9 acyl-CoA dehydrogenase compare
Atu1456 -1.0 -4.7 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1714 -1.0 -1.4 exonuclease III compare
Atu3015 -1.0 -5.0 hypothetical protein compare
Atu2527 -1.0 -5.8 dioxygenase compare
Atu0331 -1.0 -2.2 sigma-54 modulation protein compare
Atu4887 -1.0 -3.1 hypothetical protein compare
Atu2803 -0.9 -2.6 Cobalamin biosynthesis associated protein compare
Atu2204 -0.9 -2.2 hypothetical protein compare
Atu1846 -0.9 -1.5 hypothetical protein compare
Atu2125 -0.9 -1.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu4514 -0.9 -3.6 RpiR family transcriptional regulator compare
Atu0894 -0.9 -1.7 ABC transporter, membrane spanning protein compare
Atu3608 -0.9 -4.2 hypothetical protein compare
Atu4869 -0.9 -3.7 hypothetical protein compare
Atu2020 -0.9 -2.2 transcriptional regulator, TetR family compare
Atu2831 -0.9 -2.6 glucose inhibited division protein A compare
Atu2192 -0.9 -1.2 hypothetical protein compare
Atu6098 -0.9 -0.8 transcriptional regulator, HTH family compare
Atu0189 -0.9 -1.6 ABC transporter, membrane spanning protein (peptide) compare
Atu2526 -0.9 -3.4 hypothetical protein compare
Atu2270 -0.9 -1.5 ATP-dependent Clp protease, proteolytic subunit compare
Atu3775 -0.9 -1.4 hypothetical protein compare
Atu0671 -0.9 -2.3 hypothetical protein compare
Atu2293 -0.9 -1.6 hypothetical protein compare
Atu2267 -0.9 -4.1 hypothetical protein compare
Atu3016 -0.9 -3.0 phosphoglyceromutase compare
Atu4329 -0.9 -4.2 polysaccharide export protein compare
Atu0201 -0.9 -1.5 hypothetical protein compare
Atu0445 -0.9 -3.4 hypothetical protein compare
Atu2286 -0.9 -1.2 hypothetical protein compare
Atu2554 -0.9 -1.2 lysyl-tRNA synthetase compare
Atu2531 -0.8 -3.1 actinorhodin polyketide dimerase compare
Atu2797 -0.8 -1.4 cobalamin biosynthesis protein compare
Atu3798 -0.8 -3.1 TetR family transcriptional regulator compare
Atu1455 -0.8 -2.8 hypothetical protein compare
Atu3020 -0.8 -4.7 GntR family transcriptional regulator compare
Atu1339 -0.8 -2.6 ribonuclease E compare
Atu0607 -0.8 -6.0 isocitrate lyase compare
Atu3023 -0.8 -5.1 sugar ABC transporter permease compare
Atu1103 -0.8 -1.7 rRNA-adenine N6,N6-dimethyltransferase compare
Atu0795 -0.8 -1.9 hypothetical protein compare
Atu4878 -0.8 -3.3 hypothetical protein compare
Atu4877 -0.8 -5.2 short-chain dehydrogenase compare
Atu4328 -0.8 -2.3 hypothetical protein compare
Atu1242 -0.8 -4.4 cytochrome oxidase assembly factor compare
Atu0026 -0.8 -0.7 hypothetical protein compare
Atu2805 -0.8 -3.7 cobalamin synthesis protein compare
Atu2640 -0.8 -2.2 hypothetical protein compare
Atu1748 -0.8 -3.5 NIFU-like protein compare
Atu8023 -0.8 -1.7 hypothetical protein compare
Atu0149 -0.8 -1.7 enoyl-(acyl-carrier-protein) reductase compare
Atu3120 -0.8 -1.2 hypothetical protein compare
Atu5142 -0.8 -1.3 hypothetical protein compare
Atu5107 -0.8 -2.6 hypothetical protein compare
Atu4873 -0.8 -3.4 TetR family transcriptional regulator compare
Atu0626 -0.7 -3.5 alcohol dehydrogenase compare
Atu4161 -0.7 -1.1 hypothetical protein compare
Atu3011 -0.7 -1.7 ArsR family transcriptional regulator compare
Atu2798 -0.7 -2.9 precorrin-6y methyltransferase compare
Atu3732 -0.7 -3.6 hemolysin compare
Atu4702 -0.7 -4.8 GntR family transcriptional regulator compare
Atu2116 -0.7 -2.6 hypothetical protein compare
Atu4686 -0.7 -2.0 hypothetical protein compare
Atu1739 -0.7 -1.9 permease compare
Atu1685 -0.7 -0.8 hypothetical protein compare
Atu4876 -0.7 -4.9 oxidoreductase compare
Atu2832 -0.7 -2.2 tRNA modification GTPase compare
Atu0141 -0.7 -0.6 cytochrome O ubiquinol oxidase subunit I compare
Atu2579 -0.7 -3.5 metal dependant beta lactamase protein compare
Atu8093 -0.7 -3.3 hypothetical protein compare
Atu4880 -0.7 -3.7 AraC family transcriptional regulator compare
Atu3019 -0.7 -3.7 hypothetical protein compare
Atu4884 -0.7 -2.3 hypothetical protein compare
Atu0923 -0.7 -3.0 hypothetical protein compare
Atu1364 -0.7 -2.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2238 -0.7 -3.4 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu2335 -0.7 -1.3 hypothetical protein compare
Atu3018 -0.7 -2.3 hypothetical protein compare
Atu3009 -0.7 -0.8 exopolysaccharide production protein compare
Atu3288 -0.7 -3.3 hydroxyethylthiazole kinase compare
Atu2809 -0.7 -4.0 cobalamin biosynthesis protein compare
Atu5125 -0.7 -2.6 GntR family transcriptional regulator compare
Atu0346 -0.7 -2.2 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3022 -0.7 -4.1 sugar ABC transporter permease compare
Atu0340 -0.7 -1.1 SAM dependent methyltransferase compare
Atu1701 -0.7 -0.9 protein-L-isoaspartate O-methyltransferase compare
Atu4889 -0.7 -3.2 hypothetical protein compare
Atu0771 -0.7 -2.9 cytochrome c oxidase subunit III compare
Atu3021 -0.7 -3.6 sugar ABC transporter ATPase compare
Atu2804 -0.7 -4.3 cobaltochelatase subunit compare
Atu4364 -0.7 -3.0 LacI family transcriptional regulator compare
Atu0608 -0.7 -4.1 transcriptional regulator compare
Atu0981 -0.7 -3.7 glutamate-ammonia-ligase adenylyltransferase compare
Atu0744 -0.7 -1.1 hypothetical protein compare
Atu1189 -0.7 -1.7 hypothetical protein compare
Atu0062 -0.6 -3.0 transcriptional regulator, ROK family compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source 2-6-dihydroxybenzoic acid in Agrobacterium fabrum C58

For carbon source 2-6-dihydroxybenzoic acid across organisms