Experiment set10IT040 for Agrobacterium fabrum C58

Compare to:

2-6-dihydroxybenzoic acid carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu6131 +1.7 7.9 TraR Antiactivator compare
Atu0926 +1.6 6.4 hypothetical protein compare
Atu1327 +1.4 5.1 NADH-ubiquinone oxidoreductase compare
Atu0931 +1.3 10.7 penicillin binding protein compare
Atu1470 +1.3 2.5 Camphor resistance protein compare
Atu5121 +1.2 9.0 two component response regulator compare
Atu8054 +1.2 1.6 hypothetical protein compare
Atu0925 +1.2 3.0 hypothetical protein compare
Atu3730 +1.1 1.9 hypothetical protein compare
Atu4469 +1.1 6.0 iron ABC transporter permease compare
Atu2017 +1.1 1.6 hypothetical protein compare
Atu3780 +1.1 5.5 hypothetical protein compare
Atu3886 +1.1 5.4 lysophospholipase compare
Atu1573 +1.0 2.1 hypothetical protein compare
Atu0533 +1.0 4.3 putative inhibitor of septum formation compare
Atu4162 +1.0 6.0 two-component response regulator compare
Atu0479 +1.0 5.7 ABC transporter, substrate binding protein (amino acid) compare
Atu4346 +1.0 5.8 hypothetical protein compare
Atu6036 +1.0 1.4 entry-exclusion protein compare
Atu3311 +0.9 7.9 phosphomannose isomerase compare
Atu4471 +0.9 6.7 ABC transporter substrate-binding protein compare
Atu1499 +0.9 5.5 penicillin binding protein compare
Atu1566 +0.9 1.7 hypothetical protein compare
Atu3012 +0.8 1.5 hypothetical protein compare
Atu2729 +0.8 2.9 hypothetical protein compare
Atu1056 +0.8 3.7 hypothetical protein compare
Atu3353 +0.8 5.4 mannose-1-phosphate guanylyltransferase compare
Atu4468 +0.8 4.2 iron transport ABC transporter permease compare
Atu4618 +0.8 5.3 dTDP-rhamnose-3,5-epimerase compare
Atu3712 +0.7 1.8 hypothetical protein compare
Atu4498 +0.7 4.2 hypothetical protein compare
Atu2084 +0.7 0.8 hypothetical protein compare
Atu0135 +0.7 1.2 uracil phosphoribosyltransferase compare
Atu4797 +0.7 3.7 glucose-1-phosphate cytidylyltransferase compare
Atu1483 +0.7 1.9 cytochrome b561 compare
Atu5145 +0.7 2.3 acetyltransferase compare
Atu1891 +0.7 2.0 cobalamin biosynthesis protein compare
Atu4470 +0.7 4.0 iron ABC transporter ATPase compare
Atu8046 +0.7 2.8 hypothetical protein compare
Atu4617 +0.7 5.3 dTDP-D-glucose-4,6-dehydratase compare
Atu1333 +0.7 2.3 outer membrane protein compare
Atu4615 +0.7 4.5 glucose-1-phosphate thymidylyltransferase compare
Atu4068 +0.7 1.0 sarcosine oxidase delta subunit compare
Atu4608 +0.7 5.1 hypothetical protein compare
Atu4896 +0.6 1.3 acetyltransferase compare
Atu2657 +0.6 2.1 hypothetical protein compare
Atu2489 +0.6 4.1 hypothetical protein compare
Atu2472 +0.6 1.6 hypothetical protein compare
Atu1500 +0.6 2.5 rare lipoprotein A compare
Atu5106 +0.6 2.0 DNA binding protein compare
Atu1760 +0.6 1.1 hypothetical protein compare
Atu1694 +0.6 1.1 hypothetical protein compare
Atu2183 +0.6 3.2 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0544 +0.6 1.1 hypothetical protein compare
Atu0809 +0.6 1.3 hypothetical protein compare
Atu1291 +0.6 1.1 hypothetical protein compare
Atu4061 +0.6 2.4 exopolysaccharide production repressor protein compare
Atu4499 +0.6 2.4 hypothetical protein compare
Atu3634 +0.6 1.9 penicillin-binding protein dacf precursor compare
Atu0251 +0.6 4.6 hypothetical protein compare
Atu4613 +0.6 4.3 glycosyltransferase compare
Atu8144 +0.6 1.9 hypothetical protein compare
Atu5517 +0.6 1.5 hypothetical protein compare
Atu5057 +0.6 0.8 hypothetical protein compare
Atu4614 +0.6 3.7 glycosyltransferase compare
Atu2571 +0.6 2.9 acyl carrier protein, putative compare
Atu0540 +0.6 1.9 hypothetical protein compare
Atu2083 +0.6 1.7 DNA repair protein RecN compare
Atu4897 +0.5 0.9 hypothetical protein compare
Atu1559 +0.5 2.2 hypothetical protein compare
Atu4609 +0.5 4.1 glycosyltransferase compare
Atu2042 +0.5 1.8 short chain dehydrogenase compare
Atu8041 +0.5 2.3 hypothetical protein compare
Atu2166 +0.5 1.5 hypothetical protein compare
Atu3872 +0.5 2.4 hypothetical protein compare
Atu3184 +0.5 3.5 hypothetical protein compare
Atu2441 +0.5 1.2 RNA methylase compare
Atu4306 +0.5 2.0 two component response regulator compare
Atu1888 +0.5 3.6 two component sensor kinase compare
Atu3267 +0.5 2.2 dipeptide ABC transporter permease compare
Atu8191 +0.5 1.0 hypothetical protein compare
Atu1052 +0.5 2.0 hypothetical protein compare
Atu6173 +0.5 3.2 component of type IV secretion system compare
Atu8082 +0.5 1.3 hypothetical protein compare
Atu4606 +0.5 3.1 hypothetical protein compare
Atu0547 +0.5 2.4 flagellar protein compare
Atu2069 +0.5 2.0 hypothetical protein compare
Atu0784 +0.5 2.3 hypothetical protein compare
Atu4407 +0.5 1.1 periplasmic nitrate reductase, NapD protein compare
Atu0050 +0.5 2.1 two component response regulator compare
Atu2694 +0.5 0.9 hypothetical protein compare
Atu2380 +0.5 1.4 hypothetical protein compare
Atu4160 +0.5 2.2 RNA polymerase sigma factor compare
Atu4724 +0.5 1.2 hypothetical protein compare
Atu3062 +0.5 2.5 LacI family transcriptional regulator compare
Atu1250 +0.5 2.1 hypothetical protein compare
Atu3955 +0.5 2.6 ABC transporter permease compare
Atu8135 +0.5 2.7 hypothetical protein compare
Atu1699 +0.5 1.4 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu4530 +0.5 2.0 TetR family transcriptional regulator compare
Atu0051 +0.5 2.0 two component sensor kinase compare
Atu2235 +0.4 1.3 hypothetical protein compare
Atu0612 +0.4 1.0 ABC transporter, membrane spanning protein compare
Atu4144 +0.4 0.6 hypothetical protein compare
Atu1882 +0.4 1.4 usg protein compare
Atu1083 +0.4 1.6 hypothetical protein compare
Atu2788 +0.4 1.8 citrate lyase, beta subunit compare
Atu3494 +0.4 2.3 hypothetical protein compare
Atu1354 +0.4 0.5 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu1847 +0.4 1.0 hypothetical protein compare
Atu4787 +0.4 2.2 inositol monophosphatase compare
Atu2282 +0.4 2.0 thymidine kinase compare
Atu2324 +0.4 1.5 ureidoglycolate hydrolase compare
Atu4267 +0.4 1.4 hypothetical protein compare
Atu3757 +0.4 1.0 hypothetical protein compare
Atu3510 +0.4 1.5 amidohydrolase compare
Atu1213 +0.4 1.0 hypothetical protein compare
Atu2379 +0.4 3.0 phosphomannomutase compare
Atu4799 +0.4 2.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
Atu8196 +0.4 3.0 hypothetical protein compare
Atu3468 +0.4 0.4 hypothetical protein compare
Atu0780 +0.4 2.8 hypothetical protein compare
Atu2316 +0.4 1.6 hypothetical protein compare
Atu0493 +0.4 2.9 hypothetical protein compare
Atu1160 +0.4 1.3 hypothetical protein compare
Atu3667 +0.4 1.5 aspartate alpha-decarboxylase compare
Atu0812 +0.4 1.4 hypothetical protein compare
Atu3080 +0.4 2.8 hypothetical protein compare
Atu8185 +0.4 1.4 hypothetical protein compare
Atu4266 +0.4 2.3 GntR family transcriptional regulator compare
Atu4814 +0.4 2.2 acetyltransferase compare
Atu3067 +0.4 2.3 hypothetical protein compare
Atu2384 +0.4 2.2 transcriptional regulator, TetR family compare
Atu3169 +0.4 2.3 sorbitol/mannitol ABC transporter permease compare
Atu3523 +0.4 1.9 polysaccharide biosynthesis-like protein compare
Atu0590 +0.4 2.1 transcriptional regulator repressor compare
Atu3071 +0.4 1.7 hypothetical protein compare
Atu3342 +0.4 1.8 trehalose utilization-like protein compare
Atu6171 +0.4 2.1 component of type IV secretion system compare
Atu4459 +0.4 2.0 6-O-methylguanine DNA methyltransferase compare
Atu5186 +0.4 1.2 hypothetical protein compare
Atu3182 +0.4 1.7 hypothetical protein compare
Atu5034 +0.4 1.2 hypothetical protein compare
Atu5160 +0.4 1.7 transcriptional regulator protein compare
Atu2052 +0.4 1.9 hypothetical protein compare
Atu0225 +0.4 0.4 hypothetical protein compare
Atu0577 +0.4 1.1 FLAF protein compare
Atu2236 +0.4 1.6 adenine phosphoribosyltransferase compare
Atu8154 +0.4 1.1 Plasmid stabilization system protein compare
Atu4166 +0.4 1.1 UDP-glucose 4-epimerase compare
Atu4213 +0.4 1.9 hypothetical protein compare
Atu0461 +0.4 2.7 hypothetical protein compare
Atu5481 +0.4 1.5 ABC transporter membrane spanning protein compare
Atu3124 +0.4 1.7 hypothetical protein compare
Atu1818 +0.4 1.1 hypothetical protein compare
Atu8179 +0.4 1.2 hypothetical protein compare
Atu1683 +0.4 1.2 hypothetical protein compare
Atu5513 +0.4 0.7 cold shock protein compare
Atu5475 +0.4 0.9 hypothetical protein compare
Atu4819 +0.4 1.3 hypothetical protein compare
Atu4607 +0.4 2.4 sugar acetylase compare
Atu1867 +0.4 2.2 glutamate racemase compare
Atu3648 +0.4 1.7 hypothetical protein compare
Atu0169 +0.4 2.2 hypothetical protein compare
Atu1741 +0.4 1.1 hypothetical protein compare
Atu1892 +0.4 1.1 hypothetical protein compare
Atu0912 +0.4 0.6 Na+/H+ antiporter compare
Atu0546 +0.3 1.8 flagellar biosynthetic protein compare
Atu1836 +0.3 0.6 hypothetical protein compare
Atu3358 +0.3 1.8 amino acid ABC transporter permease compare
Atu1691 +0.3 2.0 GGDEF family protein compare
Atu5205 +0.3 1.6 hypothetical protein compare
Atu1550 +0.3 1.0 polypeptide deformylase compare
Atu4374 +0.3 1.4 hypothetical protein compare
Atu0063 +0.3 1.5 ABC transporter, substrate binding protein (sugar) compare
Atu2157 +0.3 1.7 tyrosine/serine protein phosphatase compare
Atu0464 +0.3 2.6 hypothetical protein compare
Atu4662 +0.3 1.7 oligopeptide ABC transporter permease compare
Atu8167 +0.3 2.0 putative transmembrane protein compare
Atu0827 +0.3 1.3 hypothetical protein compare
Atu4794 +0.3 3.0 polysaccharide biosynthesis protein compare
Atu4807 +0.3 2.2 exopolysaccharide export protein compare
Atu4023 +0.3 1.2 ferrichrome ABC transporter substrate-binding protein compare
Atu3068 +0.3 1.9 ribokinase compare
Atu2370 +0.3 2.2 hypothetical protein compare
Atu1993 +0.3 1.6 tRNA/rRNA metyltransferase compare
Atu8040 +0.3 1.5 hypothetical protein compare
Atu4223 +0.3 0.6 sarcosine oxidase delta subunit compare
Atu0924 +0.3 1.3 hypothetical protein compare
Atu0772 +0.3 1.4 hypothetical protein compare
Atu8138 +0.3 0.7 hypothetical protein compare
Atu3121 +0.3 0.6 cold shock protein compare
Atu4761 +0.3 2.4 hypothetical protein compare
Atu8020 +0.3 1.5 hypothetical protein compare
Atu4838 +0.3 1.7 outer membrane lipoprotein compare
Atu4006 +0.3 1.9 AsnC family transcriptional regulator compare
Atu3808 +0.3 1.5 LysR family transcriptional regulator compare
Atu1039 +0.3 1.3 DNA repair protein RecO compare
Atu3096 +0.3 2.4 sn-glycerol 3-phosphate ABC transporter substrate-binding protein compare
Atu1781 +0.3 1.5 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source 2-6-dihydroxybenzoic acid in Agrobacterium fabrum C58

For carbon source 2-6-dihydroxybenzoic acid across organisms