| | gene | name | fitness | t score | description | |
|---|
| b2259 | pmrD | +1.1 | 1.6 | polymyxin resistance protein B (VIMSS) | compare |
| b4699 | fnrS | +0.9 | 1.1 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b1712 | ihfA | +0.9 | 1.3 | integration host factor subunit alpha (NCBI) | compare |
| b1358 | ydaT | +0.9 | 1.4 | Rac prophage; predicted protein (NCBI) | compare |
| b1984 | asnW | +0.8 | 1.6 | tRNA-Asn (NCBI) | compare |
| b1380 | ldhA | +0.8 | 2.4 | D-lactate dehydrogenase (NCBI) | compare |
| b2684 | mprA | +0.8 | 3.1 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b4695 | ykgT | +0.8 | 1.4 | no description | compare |
| b2044 | wcaL | +0.8 | 4.0 | predicted glycosyl transferase (NCBI) | compare |
| b3183 | obgE | +0.8 | 1.0 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b0912 | ihfB | +0.8 | 2.8 | integration host factor subunit beta (NCBI) | compare |
| b1607 | ydgC | +0.8 | 1.5 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b4647 | mokA | +0.8 | 0.4 | no description | compare |
| b4373 | rimI | +0.8 | 1.7 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b1362 | rzpR | +0.7 | 2.0 | putative Rac prophage endopeptidase (VIMSS) | compare |
| b1263 | trpD | +0.7 | 2.2 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b4418 | sraB | +0.7 | 1.1 | unknown RNA (NCBI) | compare |
| b0580 | ybdJ | +0.7 | 1.9 | predicted inner membrane protein (NCBI) | compare |
| b1811 | yoaH | +0.7 | 2.6 | hypothetical protein (NCBI) | compare |
| b2187 | yejL | +0.7 | 2.3 | hypothetical protein (NCBI) | compare |
| b1667 | ydhR | +0.7 | 1.5 | hypothetical protein (NCBI) | compare |
| b3649 | rpoZ | +0.7 | 1.9 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b4360 | yjjA | +0.6 | 1.6 | putative glycoprotein/receptor (VIMSS) | compare |
| b1334 | fnr | +0.6 | 1.7 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b0101 | yacG | +0.6 | 2.5 | zinc-binding protein (NCBI) | compare |
| b0263 | afuB | +0.6 | 1.3 | CP4-6 prophage; predicted ferric trasnporter subunit (RefSeq) | compare |
| b0753 | ybgS | +0.6 | 2.1 | hypothetical protein (NCBI) | compare |
| b1524 | yneH | +0.6 | 0.7 | predicted glutaminase (NCBI) | compare |
| b1038 | csgF | +0.6 | 1.8 | predicted transport protein (NCBI) | compare |
| b1823 | cspC | +0.6 | 1.3 | stress protein, member of the CspA-family (NCBI) | compare |
| b0778 | bioD | +0.6 | 2.3 | dethiobiotin synthetase (NCBI) | compare |
| b0641 | rlpB | +0.6 | 1.8 | minor lipoprotein (NCBI) | compare |
| b1921 | fliZ | +0.6 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3239 | yhcO | +0.6 | 2.3 | predicted barnase inhibitor (NCBI) | compare |
| b2419 | yfeK | +0.6 | 0.9 | hypothetical protein (NCBI) | compare |
| b1526 | yneJ | +0.6 | 1.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4155 | yjeA | +0.6 | 0.5 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b1606 | folM | +0.6 | 3.0 | short chain dehydrogenase (NCBI) | compare |
| b2765 | ygcM | +0.5 | 2.3 | 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) (NCBI) | compare |
| b1609 | rstB | +0.5 | 2.2 | sensory histidine kinase in two-component regulatory system with RstA (NCBI) | compare |
| b4585 | sroB | +0.5 | 0.9 | Novel sRNA, function unknown (RefSeq) | compare |
| b2377 | yfdY | +0.5 | 1.8 | predicted inner membrane protein (NCBI) | compare |
| b3658 | selC | +0.5 | 1.7 | tRNA-Sec (NCBI) | compare |
| b1901 | araF | +0.5 | 2.6 | L-arabinose transporter subunit (NCBI) | compare |
| b1699 | ydiS | +0.5 | 2.2 | predicted oxidoreductase with FAD/NAD(P)-binding domain (NCBI) | compare |
| b1233 | ychJ | +0.5 | 2.3 | hypothetical protein (NCBI) | compare |
| b1593 | b1593 | +0.5 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1751 | ydjY | +0.5 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b4692 | oweE | +0.5 | 1.7 | no description | compare |
| b3611 | yibN | +0.5 | 2.4 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b1147 | ymfL | +0.5 | 1.5 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1151 | ymfO | +0.5 | 1.9 | e14 prophage; conserved protein (RefSeq) | compare |
| b1161 | ycgX | +0.5 | 0.6 | hypothetical protein (NCBI) | compare |
| b2614 | grpE | +0.5 | 1.1 | heat shock protein (NCBI) | compare |
| b0504 | ybbS | +0.5 | 2.0 | DNA-binding transcriptional activator of the allD operon (NCBI) | compare |
| b1305 | pspB | +0.5 | 1.6 | phage shock protein B (NCBI) | compare |
| b2398 | yfeC | +0.5 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0010 | yaaH | +0.5 | 2.3 | conserved inner membrane protein associated with acetate transport (NCBI) | compare |
| b1253 | yciA | +0.5 | 1.7 | predicted hydrolase (NCBI) | compare |
| b1640 | ydhH | +0.5 | 1.3 | anhydro-N-acetylmuramic acid kinase (NCBI) | compare |
| b2707 | srlR | +0.5 | 2.4 | DNA-bindng transcriptional repressor (NCBI) | compare |
| b1827 | kdgR | +0.5 | 1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1180 | ycgM | +0.5 | 2.0 | predicted isomerase/hydrolase (NCBI) | compare |
| b0851 | nfsA | +0.5 | 2.5 | nitroreductase A, NADPH-dependent, FMN-dependent (NCBI) | compare |
| b2432 | yfeY | +0.5 | 1.1 | hypothetical protein (NCBI) | compare |
| b2940 | yqgC | +0.5 | 2.0 | hypothetical protein (NCBI) | compare |
| b0389 | yaiA | +0.5 | 1.4 | hypothetical protein (NCBI) | compare |
| b4592 | yccB | +0.5 | 0.5 | hypothetical protein (RefSeq) | compare |
| b2229 | b2229 | +0.5 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b2579 | yfiD | +0.5 | 0.7 | pyruvate formate lyase subunit (NCBI) | compare |
| b1183 | umuD | +0.5 | 1.2 | DNA polymerase V, subunit D (NCBI) | compare |
| b2193 | narP | +0.5 | 2.4 | DNA-binding response regulator in two-component regulatory system with NarQ or NarX (NCBI) | compare |
| b0926 | ycbK | +0.5 | 2.4 | hypothetical protein (NCBI) | compare |
| b3148 | yraN | +0.5 | 1.4 | hypothetical protein (NCBI) | compare |
| b1006 | ycdG | +0.5 | 2.3 | putative transport protein (VIMSS) | compare |
| b3029 | ygiN | +0.5 | 1.4 | quinol monooxygenase (NCBI) | compare |
| b2300 | yfcE | +0.5 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1642 | slyA | +0.4 | 0.8 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b3119 | tdcR | +0.4 | 1.0 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b1620 | malI | +0.4 | 1.1 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2804 | fucU | +0.4 | 1.0 | L-fucose mutarotase (NCBI) | compare |
| b1959 | yedA | +0.4 | 1.6 | predicted inner membrane protein (NCBI) | compare |
| b2708 | gutQ | +0.4 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1553 | ydfP | +0.4 | 1.2 | Qin prophage; conserved protein (NCBI) | compare |
| b4613 | dinQ | +0.4 | 0.8 | Damage inducible, function unknown (RefSeq) | compare |
| b4533 | ynfO | +0.4 | 1.0 | Qin prophage; predicted protein (NCBI) | compare |
| b0247 | ykfG | +0.4 | 0.7 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b1295 | ymjA | +0.4 | 0.9 | hypothetical protein (NCBI) | compare |
| b2814 | metZ | +0.4 | 0.8 | tRNA-Met (NCBI) | compare |
| b1282 | yciH | +0.4 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b2916 | argP | +0.4 | 2.2 | chromosome replication initiation inhibitor protein (NCBI) | compare |
| b1384 | feaR | +0.4 | 2.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1559 | b1559 | +0.4 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1821 | b1821 | +0.4 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0864 | artP | +0.4 | 1.6 | arginine transporter subunit (NCBI) | compare |
| b2209 | eco | +0.4 | 0.7 | ecotin precursor (NCBI) | compare |
| b1478 | adhP | +0.4 | 1.6 | alcohol dehydrogenase (VIMSS) | compare |
| b3002 | yqhA | +0.4 | 0.7 | hypothetical protein (NCBI) | compare |
| b3228 | sspB | +0.4 | 1.7 | ClpXP protease specificity-enhancing factor (NCBI) | compare |
| b3221 | yhcH | +0.4 | 2.0 | hypothetical protein (NCBI) | compare |
| b1949 | fliQ | +0.4 | 1.1 | flagellar biosynthesis protein Q (NCBI) | compare |
| b4552 | yrhC | +0.4 | 0.4 | no description | compare |
| b2859 | ygeO | +0.4 | 0.8 | hypothetical protein (RefSeq) | compare |
| b0775 | bioB | +0.4 | 2.1 | biotin synthase (NCBI) | compare |
| b2792 | yqcC | +0.4 | 1.4 | hypothetical protein (NCBI) | compare |
| b4246 | pyrL | +0.4 | 0.8 | pyrBI operon leader peptide (NCBI) | compare |
| b1008 | ycdI | +0.4 | 1.7 | hypothetical protein (NCBI) | compare |
| b0906 | ycaP | +0.4 | 2.3 | conserved inner membrane protein (NCBI) | compare |
| b4460 | araH | +0.4 | 1.0 | fused L-arabinose transporter subunits of ABC superfamily: membrane components (RefSeq) | compare |
| b1222 | narX | +0.4 | 1.7 | sensory histidine kinase in two-component regulatory system with NarL (NCBI) | compare |
| b1839 | yebY | +0.4 | 1.3 | hypothetical protein (NCBI) | compare |
| b0613 | citG | +0.4 | 1.7 | triphosphoribosyl-dephospho-CoA transferase (NCBI) | compare |
| b1777 | b1777 | +0.4 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2198 | ccmD | +0.4 | 1.3 | cytochrome c biogenesis protein (NCBI) | compare |
| b0340 | cynS | +0.4 | 1.4 | cyanate hydratase (NCBI) | compare |
| b1684 | sufA | +0.4 | 0.8 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b0210 | yafE | +0.4 | 1.2 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b1608 | rstA | +0.4 | 1.6 | DNA-binding response regulator in two-component regulatory system with RstB (RefSeq) | compare |
| b2134 | pbpG | +0.4 | 2.3 | penicillin-binding protein 7 (VIMSS) | compare |
| b1853 | yebK | +0.4 | 0.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2668 | ygaP | +0.4 | 2.0 | predicted inner membrane protein with hydrolase activity (NCBI) | compare |
| b0388 | aroL | +0.4 | 1.5 | shikimate kinase II (NCBI) | compare |
| b0495 | ybbA | +0.4 | 1.6 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b2049 | cpsB | +0.4 | 1.5 | mannose-1-phosphate guanyltransferase (NCBI) | compare |
| b2918 | argK | +0.4 | 1.7 | arginine/ornithine transport system ATPase (NCBI) | compare |
| b0785 | moaE | +0.4 | 1.6 | molybdopterin synthase, large subunit (NCBI) | compare |
| b0604 | dsbG | +0.4 | 2.1 | thiol:disulfide interchange protein (VIMSS) | compare |
| b2443 | yffL | +0.4 | 2.0 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0505 | allA | +0.4 | 1.2 | ureidoglycolate hydrolase (NCBI) | compare |
| b2666 | yqaE | +0.4 | 1.8 | predicted membrane protein (NCBI) | compare |
| b0682 | ybfN | +0.4 | 1.6 | predicted lipoprotein (NCBI) | compare |
| b1072 | flgA | +0.4 | 1.5 | flagellar basal body P-ring biosynthesis protein A (NCBI) | compare |
| b1859 | znuB | +0.4 | 2.2 | high-affinity zinc transporter membrane component (NCBI) | compare |
| b4685 | yrbN | +0.4 | 0.8 | expressed protein (RefSeq) | compare |
| b2301 | yfcF | +0.4 | 1.7 | predicted enzyme (NCBI) | compare |
| b1234 | rssA | +0.4 | 1.6 | conserved protein (RefSeq) | compare |
| b0776 | bioF | +0.4 | 2.2 | 8-amino-7-oxononanoate synthase (NCBI) | compare |
| b1962 | yedJ | +0.4 | 1.9 | predicted phosphohydrolase (NCBI) | compare |
| b4104 | phnE | +0.4 | 1.4 | phosphonate/organophosphate ester transporter subunit (NCBI) | compare |
| b0556 | rzpD | +0.4 | 1.2 | DLP12 prophage; predicted murein endopeptidase (NCBI) | compare |
| b1837 | yebW | +0.4 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1789 | yeaL | +0.4 | 1.4 | conserved inner membrane protein (NCBI) | compare |
| b1048 | mdoG | +0.4 | 1.7 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b4152 | frdC | +0.4 | 0.9 | fumarate reductase subunit C (NCBI) | compare |
| b1475 | fdnH | +0.4 | 1.5 | formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible (NCBI) | compare |
| b0109 | nadC | +0.3 | 2.0 | nicotinate-nucleotide pyrophosphorylase (NCBI) | compare |
| b0934 | ycbM | +0.3 | 0.7 | putative transport system permease protein (VIMSS) | compare |
| b2634 | yfjR | +0.3 | 1.5 | CP4-57 prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2114 | metG | +0.3 | 0.9 | methionyl-tRNA synthetase (NCBI) | compare |
| b1412 | azoR | +0.3 | 1.1 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b0802 | ybiJ | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b1296 | ycjJ | +0.3 | 1.2 | putative amino acid/amine transport protein (VIMSS) | compare |
| b2303 | folX | +0.3 | 2.1 | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase (NCBI) | compare |
| b4519 | icdC | +0.3 | 1.3 | no description | compare |
| b2061 | wzb | +0.3 | 0.8 | protein-tyrosine phosphatase (NCBI) | compare |
| b4614 | sokA | +0.3 | 1.0 | no description | compare |
| b2846 | yqeH | +0.3 | 0.2 | orf, hypothetical protein (VIMSS) | compare |
| b2221 | atoD | +0.3 | 1.3 | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) | compare |
| b0849 | grxA | +0.3 | 1.1 | glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a) (NCBI) | compare |
| b1729 | ydjN | +0.3 | 1.4 | predicted transporter (NCBI) | compare |
| b1520 | b1520 | +0.3 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2913 | serA | +0.3 | 2.0 | D-3-phosphoglycerate dehydrogenase (NCBI) | compare |
| b1372 | b1372 | +0.3 | 1.8 | putative membrane protein (VIMSS) | compare |
| b4041 | plsB | +0.3 | 0.9 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b2142 | yohK | +0.3 | 2.0 | predicted inner membrane protein (NCBI) | compare |
| b2587 | kgtP | +0.3 | 2.0 | alpha-ketoglutarate transporter (NCBI) | compare |
| b4642 | yoeD | +0.3 | 1.1 | no description | compare |
| b1104 | ycfL | +0.3 | 0.7 | hypothetical protein (NCBI) | compare |
| b1806 | yeaY | +0.3 | 1.1 | predicted lipoprotein (NCBI) | compare |
| b0523 | purE | +0.3 | 1.2 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b4148 | sugE | +0.3 | 1.6 | suppresses groEL, may be chaperone (VIMSS) | compare |
| b3098 | yqjD | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b1539 | ydfG | +0.3 | 1.2 | L-allo-threonine dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b2700 | ygaD | +0.3 | 1.4 | competence damage-inducible protein A (NCBI) | compare |
| b1213 | ychQ | +0.3 | 1.2 | predicted transcriptional regulator (NCBI) | compare |
| b4651 | yibW | +0.3 | 0.2 | no description | compare |
| b0061 | araD | +0.3 | 1.9 | L-ribulose-5-phosphate 4-epimerase (NCBI) | compare |
| b4589 | ylcI | +0.3 | 1.0 | hypothetical protein (RefSeq) | compare |
| b3449 | ugpQ | +0.3 | 1.5 | cytoplasmic glycerophosphodiester phosphodiesterase (NCBI) | compare |
| b1920 | fliY | +0.3 | 0.8 | cystine transporter subunit (NCBI) | compare |
| b1577 | ydfE | +0.3 | 1.7 | Qin prophage; predicted protein (RefSeq) | compare |
| b1279 | yciS | +0.3 | 0.5 | conserved inner membrane protein (NCBI) | compare |
| b0385 | yaiC | +0.3 | 1.8 | predicted diguanylate cyclase (NCBI) | compare |
| b0902 | pflA | +0.3 | 1.9 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b2319 | usg | +0.3 | 1.5 | hypothetical protein (NCBI) | compare |
| b4656 | yjhY | +0.3 | 1.1 | no description | compare |
| b3010 | yqhC | +0.3 | 1.5 | putative ARAC-type regulatory protein (VIMSS) | compare |
| b1565 | ydfV | +0.3 | 1.2 | Qin prophage; predicted protein (NCBI) | compare |
| b1656 | sodB | +0.3 | 1.0 | superoxide dismutase, Fe (NCBI) | compare |
| b0994 | torT | +0.3 | 1.4 | periplasmic sensory protein associated with the TorRS two-component regulatory system (NCBI) | compare |
| b4349 | hsdM | +0.3 | 2.3 | DNA methylase M (NCBI) | compare |
| b2093 | gatB | +0.3 | 1.3 | galactitol-specific enzyme IIB component of PTS (NCBI) | compare |
| b1727 | yniC | +0.3 | 0.7 | predicted hydrolase (NCBI) | compare |
| b2170 | setB | +0.3 | 1.5 | lactose/glucose efflux system (NCBI) | compare |
| b2541 | hcaB | +0.3 | 1.4 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase (NCBI) | compare |
| b1096 | pabC | +0.3 | 1.7 | 4-amino-4-deoxychorismate lyase (NCBI) | compare |
| b4547 | ypfN | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b1205 | ychH | +0.3 | 0.5 | predicted inner membrane protein (NCBI) | compare |
| b3164 | pnp | +0.3 | 0.8 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0336 | codB | +0.3 | 1.8 | cytosine transporter (NCBI) | compare |