| | gene | name | fitness | t score | description | |
|---|
| b0920 | ycbC | -6.2 | -4.3 | conserved inner membrane protein (NCBI) | compare |
| b1865 | nudB | -3.6 | -2.4 | dATP pyrophosphohydrolase (NCBI) | compare |
| b2259 | pmrD | -3.1 | -1.7 | polymyxin resistance protein B (VIMSS) | compare |
| b3636 | rpmG | -3.0 | -2.9 | 50S ribosomal protein L33 (NCBI) | compare |
| b3341 | rpsG | -2.7 | -1.8 | 30S ribosomal protein S7 (NCBI) | compare |
| b1830 | prc | -2.7 | -4.5 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b0053 | surA | -2.7 | -4.4 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1429 | tehA | -2.5 | -1.6 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b2642 | yfjW | -2.5 | -1.6 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b0145 | dksA | -2.5 | -2.9 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0149 | mrcB | -2.2 | -12.7 | penicillin-binding protein 1b (NCBI) | compare |
| b0990 | cspG | -2.2 | -2.0 | DNA-binding transcriptional regulator (NCBI) | compare |
| b2433 | b2433 | -2.1 | -3.1 | orf, hypothetical protein (VIMSS) | compare |
| b1252 | tonB | -2.1 | -3.4 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b0630 | lipB | -2.1 | -1.4 | protein of lipoate biosynthesis (VIMSS) | compare |
| b0739 | tolA | -2.0 | -2.3 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b4655 | ythA | -2.0 | -1.5 | expressed protein (RefSeq) | compare |
| b0564 | appY | -2.0 | -1.3 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b2363 | yfdT | -1.9 | -2.8 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b2620 | smpB | -1.9 | -1.8 | SsrA-binding protein (NCBI) | compare |
| b1863 | ruvC | -1.9 | -1.8 | Holliday junction resolvase (NCBI) | compare |
| b2531 | iscR | -1.9 | -1.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2830 | nudH | -1.9 | -1.2 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b4171 | miaA | -1.8 | -3.0 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b3390 | aroK | -1.8 | -2.2 | shikimate kinase I (NCBI) | compare |
| b2518 | ndk | -1.8 | -2.5 | nucleoside diphosphate kinase (NCBI) | compare |
| b4042 | dgkA | -1.6 | -1.9 | diacylglycerol kinase (NCBI) | compare |
| b0730 | mngR | -1.6 | -1.8 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b3163 | nlpI | -1.6 | -4.3 | hypothetical protein (NCBI) | compare |
| b0092 | ddlB | -1.6 | -5.4 | D-alanylalanine synthetase (NCBI) | compare |
| b0049 | apaH | -1.5 | -2.7 | diadenosinetetraphosphatase (NCBI) | compare |
| b0726 | sucA | -1.5 | -3.6 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b3621 | rfaC | -1.5 | -4.3 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b4520 | ymgF | -1.5 | -1.6 | hypothetical protein (NCBI) | compare |
| b0852 | rimK | -1.4 | -3.0 | ribosomal protein S6 modification protein (NCBI) | compare |
| b1696 | ydiP | -1.4 | -1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3764 | yifE | -1.4 | -3.5 | hypothetical protein (NCBI) | compare |
| b4418 | sraB | -1.4 | -2.0 | unknown RNA (NCBI) | compare |
| b3844 | fre | -1.4 | -5.0 | NAD(P)H-flavin reductase (NCBI) | compare |
| b3620 | rfaF | -1.4 | -4.6 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b0740 | tolB | -1.3 | -3.3 | translocation protein TolB precursor (NCBI) | compare |
| b1370 | insH-5 | -1.3 | -2.4 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b2912 | ygfA | -1.3 | -2.9 | putative ligase (VIMSS) | compare |
| b4503 | yafF | -1.3 | -0.8 | no description | compare |
| b3916 | pfkA | -1.2 | -1.7 | 6-phosphofructokinase (NCBI) | compare |
| b2567 | rnc | -1.2 | -0.8 | ribonuclease III (NCBI) | compare |
| b1765 | ydjA | -1.2 | -1.1 | predicted oxidoreductase (NCBI) | compare |
| b0937 | ssuE | -1.2 | -2.3 | NAD(P)H-dependent FMN reductase (NCBI) | compare |
| b2085 | b2085 | -1.2 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b2744 | surE | -1.2 | -4.9 | acid phosphatase (NCBI) | compare |
| b0617 | citD | -1.2 | -2.1 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b0627 | tatE | -1.2 | -2.3 | twin arginine translocase protein E (NCBI) | compare |
| b0858 | ybjO | -1.2 | -1.9 | predicted inner membrane protein (NCBI) | compare |
| b1238 | tdk | -1.2 | -3.2 | thymidine kinase (NCBI) | compare |
| b3778 | rep | -1.2 | -4.7 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1847 | yebF | -1.2 | -1.7 | predicted protein (RefSeq) | compare |
| b0729 | sucD | -1.2 | -2.1 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1677 | lpp | -1.1 | -1.8 | murein lipoprotein (NCBI) | compare |
| b1575 | dicB | -1.1 | -1.3 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b1332 | ynaJ | -1.1 | -0.7 | predicted inner membrane protein (NCBI) | compare |
| b2083 | yegZ | -1.1 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b0232 | yafN | -1.1 | -0.7 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b1711 | btuC | -1.1 | -3.4 | vtamin B12-transporter permease (NCBI) | compare |
| b4676 | yoaK | -1.1 | -0.7 | expressed protein (RefSeq) | compare |
| b3870 | glnA | -1.1 | -1.9 | glutamine synthetase (NCBI) | compare |
| b1530 | marR | -1.1 | -3.4 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b1361 | ydaW | -1.1 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b2820 | recB | -1.1 | -0.7 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b4480 | hdfR | -1.1 | -4.2 | transcriptional regulator HdfR (NCBI) | compare |
| b3977 | tyrU | -1.1 | -0.8 | tRNA-Tyr (NCBI) | compare |
| b4644 | ypjI | -1.1 | -3.5 | no description | compare |
| b2376 | ypdI | -1.1 | -2.1 | predicted lipoprotein involved in colanic acid biosynthesis (NCBI) | compare |
| b3169 | nusA | -1.0 | -2.2 | transcription elongation factor NusA (NCBI) | compare |
| b1527 | yneK | -1.0 | -1.4 | hypothetical protein (NCBI) | compare |
| b4509 | ylcG | -1.0 | -2.3 | DLP12 prophage; predicted protein (NCBI) | compare |
| b2017 | yefM | -1.0 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2189 | proL | -1.0 | -1.7 | tRNA-Pro (NCBI) | compare |
| b2904 | gcvH | -1.0 | -1.8 | glycine cleavage system protein H (NCBI) | compare |
| b0683 | fur | -1.0 | -1.3 | ferric uptake regulator (NCBI) | compare |
| b4239 | treC | -1.0 | -1.0 | trehalose-6-P hydrolase (NCBI) | compare |
| b3629 | rfaS | -1.0 | -1.7 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b3619 | rfaD | -1.0 | -2.5 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b4535 | yniD | -1.0 | -1.1 | predicted protein (RefSeq) | compare |
| b2318 | truA | -1.0 | -2.3 | tRNA pseudouridine synthase A (NCBI) | compare |
| b3962 | udhA | -1.0 | -4.1 | putative oxidoreductase (VIMSS) | compare |
| b4436 | ryeC | -1.0 | -1.3 | Novel sRNA, function unknown; paralogous to the other QUAD sRNA genes unknown (RefSeq) | compare |
| b1107 | nagZ | -1.0 | -2.7 | beta-hexosaminidase (NCBI) | compare |
| b1824 | yobF | -1.0 | -1.4 | hypothetical protein (NCBI) | compare |
| b0015 | dnaJ | -1.0 | -5.5 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b4242 | mgtA | -1.0 | -5.5 | magnesium transporter (NCBI) | compare |
| b1346 | ydaQ | -1.0 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1861 | ruvA | -1.0 | -0.8 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b2330 | yfcB | -1.0 | -1.2 | putative adenine-specific methylase (VIMSS) | compare |
| b1648 | b1648 | -1.0 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1730 | ydjO | -1.0 | -0.6 | predicted protein (RefSeq) | compare |
| b4679 | yohP | -0.9 | -2.0 | expressed protein (RefSeq) | compare |
| b0125 | hpt | -0.9 | -3.3 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b3966 | btuB | -0.9 | -7.1 | vitamin B12/cobalamin outer membrane transporter (NCBI) | compare |
| b1334 | fnr | -0.9 | -1.8 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b3443 | yrhA | -0.9 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3205 | yhbJ | -0.9 | -2.6 | hypothetical protein (NCBI) | compare |
| b1579 | intQ | -0.9 | -0.6 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b3026 | qseC | -0.9 | -1.7 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b0957 | ompA | -0.9 | -2.1 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b3052 | rfaE | -0.9 | -3.0 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b4045 | yjbJ | -0.9 | -1.3 | predicted stress response protein (NCBI) | compare |
| b4019 | metH | -0.9 | -7.0 | B12-dependent methionine synthase (NCBI) | compare |
| b2038 | rfbC | -0.9 | -4.2 | dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) | compare |
| b1620 | malI | -0.9 | -1.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2498 | upp | -0.9 | -1.6 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b0737 | tolQ | -0.9 | -1.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3183 | obgE | -0.9 | -0.8 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1758 | b1758 | -0.9 | -1.1 | putative cytochrome oxidase (VIMSS) | compare |
| b2586 | yfiM | -0.9 | -2.6 | predicted protein (RefSeq) | compare |
| b3414 | gntY | -0.9 | -3.2 | predicted gluconate transport associated protein (NCBI) | compare |
| b4416 | rybA | -0.8 | -1.2 | unknown RNA (NCBI) | compare |
| b3858 | yihD | -0.8 | -1.9 | hypothetical protein (NCBI) | compare |
| b1205 | ychH | -0.8 | -1.7 | predicted inner membrane protein (NCBI) | compare |
| b0088 | murD | -0.8 | -1.5 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b1950 | fliR | -0.8 | -1.5 | flagellar biosynthesis protein R (NCBI) | compare |
| b3630 | rfaP | -0.8 | -4.5 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b4177 | purA | -0.8 | -0.9 | adenylosuccinate synthetase (NCBI) | compare |
| b3631 | rfaG | -0.8 | -5.9 | glucosyltransferase I (NCBI) | compare |
| b4146 | yjeK | -0.8 | -0.9 | predicted lysine aminomutase (NCBI) | compare |
| b4202 | rpsR | -0.8 | -0.7 | 30S ribosomal protein S18 (NCBI) | compare |
| b3405 | ompR | -0.8 | -2.8 | osmolarity response regulator (NCBI) | compare |
| b1185 | dsbB | -0.8 | -1.8 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b0143 | pcnB | -0.8 | -3.2 | poly(A) polymerase I (VIMSS) | compare |
| b2165 | yeiN | -0.8 | -2.9 | hypothetical protein (NCBI) | compare |
| b3842 | rfaH | -0.8 | -3.2 | transcriptional activator RfaH (NCBI) | compare |
| b1874 | cutC | -0.8 | -1.7 | copper homeostasis protein (NCBI) | compare |
| b2512 | yfgL | -0.8 | -3.1 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b2175 | spr | -0.8 | -2.3 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b4631 | ykgQ | -0.8 | -0.9 | no description | compare |
| b3199 | yrbK | -0.8 | -1.5 | hypothetical protein (NCBI) | compare |
| b2894 | xerD | -0.8 | -0.7 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1961 | dcm | -0.8 | -1.4 | DNA cytosine methylase (NCBI) | compare |
| b1344 | ydaO | -0.8 | -1.3 | predicted C32 tRNA thiolase (NCBI) | compare |
| b0890 | ftsK | -0.8 | -1.2 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2003 | yeeT | -0.8 | -2.5 | CP4-44 prophage; predicted protein (NCBI) | compare |
| b4191 | ulaR | -0.7 | -1.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3119 | tdcR | -0.7 | -1.5 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b3644 | yicC | -0.7 | -3.2 | hypothetical protein (NCBI) | compare |
| b3811 | xerC | -0.7 | -0.7 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b1831 | proQ | -0.7 | -2.5 | putative solute/DNA competence effector (NCBI) | compare |
| b2808 | gcvA | -0.7 | -1.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4613 | dinQ | -0.7 | -1.2 | Damage inducible, function unknown (RefSeq) | compare |
| b0438 | clpX | -0.7 | -3.2 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b3261 | fis | -0.7 | -0.8 | DNA-binding protein Fis (NCBI) | compare |
| b3469 | zntA | -0.7 | -3.6 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b1536 | ydeI | -0.7 | -0.5 | hypothetical protein (NCBI) | compare |
| b0456 | ybaA | -0.7 | -2.1 | hypothetical protein (NCBI) | compare |
| b4640 | yoeG | -0.7 | -1.1 | no description | compare |
| b2366 | dsdA | -0.7 | -2.5 | D-serine dehydratase (NCBI) | compare |
| b1877 | yecT | -0.7 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b4701 | sokX | -0.7 | -0.8 | sok-related sRNA, function unknown (RefSeq) | compare |
| b0688 | pgm | -0.7 | -1.7 | phosphoglucomutase (NCBI) | compare |
| b1192 | ldcA | -0.7 | -2.6 | L,D-carboxypeptidase A (NCBI) | compare |
| b1659 | ydhB | -0.7 | -1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4201 | priB | -0.7 | -1.5 | primosomal replication protein N (NCBI) | compare |
| b1905 | ftn | -0.7 | -3.9 | ferritin iron storage protein (cytoplasmic) (NCBI) | compare |
| b1614 | ydgA | -0.7 | -2.3 | hypothetical protein (NCBI) | compare |
| b1159 | mcrA | -0.7 | -0.4 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b2935 | tktA | -0.7 | -0.9 | transketolase 1, thiamin-binding (NCBI) | compare |
| b1480 | sra | -0.7 | -0.8 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b3839 | tatC | -0.7 | -3.3 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1286 | rnb | -0.7 | -1.2 | exoribonuclease II (NCBI) | compare |
| b0218 | yafU | -0.7 | -1.1 | predicted inner membrane protein (RefSeq) | compare |
| b3236 | mdh | -0.7 | -3.3 | malate dehydrogenase (NCBI) | compare |
| b1368 | ynaA | -0.7 | -1.2 | Rac prophage; predicted tail protein (RefSeq) | compare |
| b1175 | minD | -0.7 | -2.3 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b1550 | b1550 | -0.7 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b0141 | yadN | -0.6 | -2.8 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3613 | yibP | -0.6 | -1.2 | putative membrane protein (VIMSS) | compare |
| b2624 | alpA | -0.6 | -3.1 | CP4-57 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b0463 | acrA | -0.6 | -4.3 | multidrug efflux system (NCBI) | compare |
| b3627 | rfaI | -0.6 | -3.6 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b1671 | ydhX | -0.6 | -1.4 | predicted 4Fe-4S ferridoxin-type protein (RefSeq) | compare |
| b2393 | nupC | -0.6 | -3.2 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b2638 | yfjU | -0.6 | -2.6 | CP4-57 prophage; conserved protein (RefSeq) | compare |
| b0723 | sdhA | -0.6 | -4.3 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b0724 | sdhB | -0.6 | -2.6 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b2291 | yfbR | -0.6 | -1.5 | hypothetical protein (NCBI) | compare |
| b4618 | tisB | -0.6 | -2.2 | lexA-regulated toxic peptide (RefSeq) | compare |
| b1261 | trpB | -0.6 | -1.6 | tryptophan synthase subunit beta (NCBI) | compare |
| b1753 | ynjA | -0.6 | -1.6 | hypothetical protein (NCBI) | compare |
| b2903 | gcvP | -0.6 | -4.3 | glycine dehydrogenase (NCBI) | compare |
| b2506 | yfgI | -0.6 | -1.3 | hypothetical protein (NCBI) | compare |
| b2951 | yggS | -0.6 | -2.2 | predicted enzyme (NCBI) | compare |
| b4552 | yrhC | -0.6 | -0.4 | no description | compare |
| b2413 | cysZ | -0.6 | -2.9 | putative sulfate transport protein CysZ (NCBI) | compare |
| b0706 | ybfD | -0.6 | -0.9 | hypothetical protein (NCBI) | compare |
| b0660 | ybeZ | -0.6 | -2.5 | predicted protein with nucleoside triphosphate hydrolase domain (RefSeq) | compare |
| b1220 | ychO | -0.6 | -2.4 | predicted invasin (RefSeq) | compare |
| b2699 | recA | -0.6 | -0.6 | recombinase A (NCBI) | compare |
| b2579 | yfiD | -0.6 | -1.1 | pyruvate formate lyase subunit (NCBI) | compare |
| b4590 | ybfK | -0.6 | -0.4 | hypothetical protein (RefSeq) | compare |
| b1292 | sapC | -0.6 | -0.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0300 | ykgA | -0.6 | -1.2 | putative ARAC-type regulatory protein (VIMSS) | compare |
| b1951 | rcsA | -0.6 | -0.7 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |