Experiment set10IT036 for Agrobacterium fabrum C58

Compare to:

4-Aminobutyric acid carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu4232 +5.1 34.5 GntR family transcriptional regulator compare
Atu4674 +4.5 38.8 GntR family transcriptional regulator compare
Atu2209 +1.7 9.5 pyrroline-5-carboxylate reductase compare
Atu0524 +1.6 12.0 transcriptional regulator, LuxR family compare
Atu0525 +1.4 9.6 transcriptional regulator, LuxR family compare
Atu4677 +0.9 1.8 hypothetical protein compare
Atu0953 +0.8 1.5 hypothetical protein compare
Atu2028 +0.8 0.8 transcriptional regulator, ArsR family compare
Atu4896 +0.8 1.7 acetyltransferase compare
Atu3160 +0.8 2.5 hypothetical protein compare
Atu0886 +0.7 1.2 hypothetical protein compare
Atu0545 +0.7 5.3 flagella associated protein compare
Atu4144 +0.7 1.1 hypothetical protein compare
Atu0551 +0.6 3.0 flagellar protein FLGA precursor compare
Atu1566 +0.6 1.0 hypothetical protein compare
Atu2017 +0.6 1.3 hypothetical protein compare
Atu2657 +0.6 1.8 hypothetical protein compare
Atu3001 +0.6 1.2 hypothetical protein compare
Atu1888 +0.6 4.9 two component sensor kinase compare
Atu5121 +0.6 4.5 two component response regulator compare
Atu0553 +0.6 3.4 flagellar hook-basal body complex protein compare
Atu0572 +0.6 2.0 hypothetical protein compare
Atu0547 +0.6 3.3 flagellar protein compare
Atu0115 +0.6 1.0 hypothetical protein compare
Atu3764 +0.6 4.7 sigma 54 dependent transcriptional activator compare
Atu0561 +0.6 4.5 flagellar motor switch protein compare
Atu2729 +0.6 2.4 hypothetical protein compare
Atu3120 +0.6 1.2 hypothetical protein compare
Atu3009 +0.6 0.7 exopolysaccharide production protein compare
Atu2235 +0.6 2.1 hypothetical protein compare
Atu0570 +0.6 4.5 Chemotaxis protein compare
Atu0554 +0.6 3.7 flagellar basal-body rod protein compare
Atu1503 +0.5 0.9 hypothetical protein compare
Atu1724 +0.5 2.0 hypothetical protein compare
Atu3497 +0.5 1.4 hypothetical protein compare
Atu0225 +0.5 0.8 hypothetical protein compare
Atu2344 +0.5 1.8 lactoylglutathione lyase compare
Atu2057 +0.5 1.5 DNA helicase II compare
Atu2084 +0.5 0.6 hypothetical protein compare
Atu0563 +0.5 3.8 flagellar motor switch protein FliG compare
Atu1570 +0.5 0.8 hypothetical protein compare
Atu0751 +0.5 1.7 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu5517 +0.5 2.2 hypothetical protein compare
Atu4187 +0.5 1.0 tRNA-Met compare
Atu6112 +0.5 2.6 conserved hypothetical protein compare
Atu0581 +0.5 4.0 flagellar biosynthesis protein compare
Atu0523 +0.5 4.2 flagellar M-ring protein compare
Atu0569 +0.5 4.2 flagellar motor protein, PAL/OmpA family compare
Atu0568 +0.5 3.3 hypothetical protein compare
Atu0562 +0.5 1.8 flagellar motor switch protein FliN compare
Atu1573 +0.5 0.8 hypothetical protein compare
Atu1834 +0.5 2.9 mutT like protein compare
Atu0583 +0.5 2.4 hypothetical protein compare
Atu3071 +0.5 1.9 hypothetical protein compare
Atu0552 +0.5 3.1 flagellar basal-body rod protein compare
Atu0564 +0.5 3.6 flagellar biosynthetic protein compare
Atu0573 +0.5 2.8 transcriptional regulator compare
Atu2130 +0.5 1.5 hypothetical protein compare
Atu0555 +0.5 3.4 flagellar basal-body rod protein FlgB compare
Atu2788 +0.5 2.9 citrate lyase, beta subunit compare
Atu3813 +0.5 2.5 3-oxoacyl-ACP reductase compare
Atu3183 +0.5 0.7 hypothetical protein compare
Atu1858 +0.5 2.0 hypothetical protein compare
Atu0236 +0.5 1.4 hypothetical protein compare
Atu0085 +0.5 1.5 tRNA pseudouridine 55 synthase compare
Atu2649 +0.5 1.8 hypothetical protein compare
Atu0546 +0.5 3.3 flagellar biosynthetic protein compare
Atu4894 +0.4 2.3 transposase compare
Atu3345 +0.4 1.0 6-pyruvoyl tetrahydrobiopterin synthase compare
Atu3467 +0.4 1.6 hypothetical protein compare
Atu3647 +0.4 1.3 hypothetical protein compare
Atu1892 +0.4 1.6 hypothetical protein compare
Atu4335 +0.4 0.9 forkhead-type phosphopeptide-binding protein compare
Atu2585 +0.4 2.2 hypothetical protein compare
Atu8154 +0.4 1.8 Plasmid stabilization system protein compare
Atu0557 +0.4 3.3 flagellum-specific ATP synthase compare
Atu2680 +0.4 1.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu8053 +0.4 1.5 hypothetical protein compare
Atu4469 +0.4 1.9 iron ABC transporter permease compare
Atu0548 +0.4 3.5 flagellar L-ring protein precursor compare
Atu1801 +0.4 1.6 hypothetical protein compare
Atu2477 +0.4 2.0 DNA oxidation protective protein, not DNA-binding compare
Atu0582 +0.4 3.5 flagellar biosynthetic protein FLIR compare
Atu4027 +0.4 2.1 cytochrome c2 compare
Atu8162 +0.4 0.6 hypothetical protein compare
Atu2286 +0.4 0.8 hypothetical protein compare
Atu0558 +0.4 2.4 flagellar basal body rod protein compare
Atu1714 +0.4 1.0 exonuclease III compare
Atu3005 +0.4 0.7 hypothetical protein compare
Atu0063 +0.4 2.0 ABC transporter, substrate binding protein (sugar) compare
Atu2567 +0.4 1.5 thiamin biosynthesis protein ThiG compare
Atu0705 +0.4 2.3 3-oxoacyl-(acyl carrier protein) reductase compare
Atu1631 +0.4 2.0 two component response regulator compare
Atu4237 +0.4 2.4 hypothetical protein compare
Atu8151 +0.4 1.1 hypothetical protein compare
Atu1001 +0.4 1.7 hypothetical protein compare
Atu4095 +0.4 2.0 hypothetical protein compare
Atu0119 +0.4 0.8 hypothetical protein compare
Atu1147 +0.4 1.7 hypothetical protein compare
Atu8161 +0.4 0.9 hypothetical protein compare
Atu2044 +0.4 2.4 HFLC protein compare
Atu1321 +0.4 1.9 hypothetical protein compare
Atu0756 +0.4 1.7 phosphoglycerate mutase compare
Atu1558 +0.4 1.2 permease compare
Atu0584 +0.4 2.9 hypothetical protein compare
Atu0976 +0.4 1.2 cycL protein compare
Atu2439 +0.4 0.7 hypothetical protein compare
Atu2571 +0.4 2.6 acyl carrier protein, putative compare
Atu1317 +0.4 1.4 metal dependent hydrolase compare
Atu4454 +0.4 1.9 RpiR family transcriptional regulator compare
Atu8143 +0.4 1.6 hypothetical protein compare
Atu0856 +0.4 0.9 transcriptional regulator, LysR family compare
Atu3032 +0.4 1.7 hypothetical protein compare
Atu1865 +0.4 2.2 hypothetical protein compare
Atu0492 +0.4 2.2 hypothetical protein compare
Atu0477 +0.4 1.1 hypothetical protein compare
Atu0135 +0.4 0.7 uracil phosphoribosyltransferase compare
Atu8138 +0.4 0.8 hypothetical protein compare
Atu0559 +0.4 2.4 hypothetical protein compare
Atu0574 +0.4 3.1 flagellar hook protein compare
Atu8157 +0.4 1.8 hypothetical protein compare
Atu1219 +0.4 0.6 hypothetical protein compare
Atu0869 +0.4 2.2 hypothetical protein compare
Atu1847 +0.4 0.9 hypothetical protein compare
Atu8055 +0.4 1.5 hypothetical protein compare
Atu0560 +0.4 3.1 flagellar motor protein compare
Atu5034 +0.3 1.0 hypothetical protein compare
Atu4583 +0.3 1.3 superoxide dismutase compare
Atu0550 +0.3 2.9 flagellar P-ring protein precursor compare
Atu3792 +0.3 2.4 L-asparagine permease compare
Atu1887 +0.3 2.1 succinoglycan biosynthesis protein compare
Atu4080 +0.3 1.4 glutamine amidotransferase compare
Atu0594 +0.3 2.2 alpha-glucosidase compare
Atu2258 +0.3 1.1 acetyltransferase compare
Atu8116 +0.3 1.4 hypothetical protein compare
Atu0535 +0.3 1.6 hypothetical protein compare
Atu3121 +0.3 0.7 cold shock protein compare
Atu4035 +0.3 2.4 two component response regulator compare
Atu3418 +0.3 2.3 acetyltransferase compare
Atu2271 +0.3 1.3 urease accessory protein compare
Atu0549 +0.3 2.1 hypothetical protein compare
Atu1052 +0.3 1.0 hypothetical protein compare
Atu2733 +0.3 1.0 hypothetical protein compare
Atu3392 +0.3 0.9 methyltransferase compare
Atu3067 +0.3 1.9 hypothetical protein compare
Atu0863 +0.3 2.1 hypothetical protein compare
Atu2164 +0.3 1.7 hypothetical protein compare
Atu1137 +0.3 2.0 NTP pyrophosphohydrolase, MutT family compare
Atu2464 +0.3 1.1 formyltetrahydrofolate deformylase compare
Atu3098 +0.3 2.1 sn-glycerol-3-phosphate ABC transporter membrane protein compare
Atu2317 +0.3 1.1 hypothetical protein compare
Atu5437 +0.3 2.0 hypothetical protein compare
Atu8177 +0.3 1.3 hypothetical protein compare
Atu5455 +0.3 1.9 hypothetical protein compare
Atu1489 +0.3 2.1 arsenical resistance protein compare
Atu8200 +0.3 1.3 hypothetical protein compare
Atu1608 +0.3 2.0 hypothetical protein compare
Atu4071 +0.3 1.4 hypothetical protein compare
Atu2135 +0.3 2.1 transcriptional regulator, TetR family compare
Atu3817 +0.3 0.9 dehydratase compare
Atu3609 +0.3 1.5 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu0050 +0.3 1.7 two component response regulator compare
Atu8132 +0.3 2.2 hypothetical protein compare
Atu5028 +0.3 1.5 IS426 transposase compare
Atu8054 +0.3 0.5 hypothetical protein compare
Atu3848 +0.3 2.1 hypothetical protein compare
Atu4406 +0.3 1.0 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu3494 +0.3 1.5 hypothetical protein compare
Atu4255 +0.3 1.8 hypothetical protein compare
Atu2630 +0.3 2.0 hypothetical protein compare
Atu1354 +0.3 0.4 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0328 +0.3 1.9 heat-inducible transcription repressor compare
Atu5122 +0.3 2.0 3-ketoacyl-ACP reductase compare
Atu5440 +0.3 1.8 hypothetical protein compare
Atu2456 +0.3 1.1 lactoylglutathione lyase compare
Atu0107 +0.3 1.3 hypothetical protein compare
Atu1629 +0.3 0.6 transcriptional regulator, ArsR family compare
Atu3603 +0.3 0.5 two component response regulator compare
Atu1661 +0.3 2.4 soluble pyridine nucleotide transhydrogenase compare
Atu4124 +0.3 1.7 branched chain amino acid ABC transporter ATPase compare
Atu5158 +0.3 1.3 hypothetical protein compare
Atu1019 +0.3 1.1 hypothetical protein compare
Atu4137 +0.3 1.2 hypothetical protein compare
Atu1483 +0.3 1.0 cytochrome b561 compare
Atu0585 +0.3 1.2 hypothetical protein compare
Atu8158 +0.3 1.0 hypothetical protein compare
Atu1529 +0.3 1.5 nitrogen fixation protein FixH compare
Atu4290 +0.3 1.1 hypothetical protein compare
Atu2146 +0.3 1.0 hypothetical protein compare
Atu1287 +0.3 1.0 hypothetical protein compare
Atu8163 +0.3 1.8 hypothetical protein compare
Atu0179 +0.3 1.5 hypothetical protein compare
Atu2786 +0.3 1.7 hypothetical protein compare
Atu3728 +0.3 1.7 hypothetical protein compare
Atu6107 +0.3 1.9 hypothetical protein compare
Atu3336 +0.3 1.1 hypothetical protein compare
Atu4641 +0.3 1.3 LysR family transcriptional regulator compare
Atu3827 +0.3 1.8 LysR family transcriptional regulator compare
Atu0725 +0.3 1.9 hypothetical protein compare
Atu8194 +0.3 0.9 hypothetical protein compare


Specific Phenotypes

For 9 genes in this experiment

For carbon source 4-Aminobutyric acid in Agrobacterium fabrum C58

For carbon source 4-Aminobutyric acid across organisms