| | gene | name | fitness | t score | description | |
|---|
| b0200 | gmhB | +2.8 | 4.6 | hypothetical protein (NCBI) | compare |
| b3052 | rfaE | +2.2 | 12.0 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b2175 | spr | +2.1 | 9.7 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b0464 | acrR | +2.0 | 15.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0439 | lon | +2.0 | 10.6 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3842 | rfaH | +1.9 | 11.4 | transcriptional activator RfaH (NCBI) | compare |
| b3631 | rfaG | +1.8 | 15.8 | glucosyltransferase I (NCBI) | compare |
| b1048 | mdoG | +1.8 | 10.4 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b0222 | lpcA | +1.7 | 6.2 | phosphoheptose isomerase (NCBI) | compare |
| b3620 | rfaF | +1.6 | 9.0 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3205 | yhbJ | +1.6 | 6.4 | hypothetical protein (NCBI) | compare |
| b3630 | rfaP | +1.6 | 12.4 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3621 | rfaC | +1.5 | 9.2 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0929 | ompF | +1.5 | 10.2 | outer membrane porin 1a (Ia;b;F) (NCBI) | compare |
| b1049 | mdoH | +1.5 | 11.0 | glucosyltransferase MdoH (NCBI) | compare |
| b4481 | rffT | +1.4 | 7.8 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3791 | rffA | +1.4 | 8.4 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b2912 | ygfA | +1.4 | 5.8 | putative ligase (VIMSS) | compare |
| b1530 | marR | +1.3 | 2.8 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b0142 | folK | +1.3 | 1.2 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b3619 | rfaD | +1.3 | 5.5 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1290 | sapF | +1.3 | 2.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1628 | rsxB | +1.1 | 3.0 | electron transport complex protein RnfB (NCBI) | compare |
| b2183 | rsuA | +1.1 | 3.5 | 16S rRNA pseudouridylate 516 synthase (NCBI) | compare |
| b4552 | yrhC | +1.1 | 1.3 | no description | compare |
| b1236 | galU | +1.1 | 5.0 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2951 | yggS | +1.1 | 4.8 | predicted enzyme (NCBI) | compare |
| b0926 | ycbK | +1.1 | 3.7 | hypothetical protein (NCBI) | compare |
| b1111 | ycfQ | +1.1 | 3.6 | orf, hypothetical protein (VIMSS) | compare |
| b3169 | nusA | +1.0 | 2.7 | transcription elongation factor NusA (NCBI) | compare |
| b3204 | ptsN | +1.0 | 4.4 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b2356 | yfdM | +1.0 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b4592 | yccB | +1.0 | 2.5 | hypothetical protein (RefSeq) | compare |
| b1613 | manA | +1.0 | 2.1 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b0683 | fur | +1.0 | 1.5 | ferric uptake regulator (NCBI) | compare |
| b3790 | rffC | +1.0 | 3.8 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b3916 | pfkA | +0.9 | 2.8 | 6-phosphofructokinase (NCBI) | compare |
| b1412 | azoR | +0.9 | 1.7 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b2947 | gshB | +0.9 | 4.0 | glutathione synthetase (NCBI) | compare |
| b0965 | b0965 | +0.9 | 2.5 | orf, hypothetical protein (VIMSS) | compare |
| b0418 | pgpA | +0.9 | 4.0 | phosphatidylglycerophosphatase A (NCBI) | compare |
| b1217 | chaB | +0.9 | 1.0 | cation transport regulator (NCBI) | compare |
| b1984 | asnW | +0.9 | 1.6 | tRNA-Asn (NCBI) | compare |
| b1676 | pykF | +0.9 | 3.7 | pyruvate kinase (NCBI) | compare |
| b1292 | sapC | +0.9 | 1.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3405 | ompR | +0.9 | 4.3 | osmolarity response regulator (NCBI) | compare |
| b1921 | fliZ | +0.8 | 2.5 | orf, hypothetical protein (VIMSS) | compare |
| b2749 | ygbE | +0.8 | 4.9 | conserved inner membrane protein (NCBI) | compare |
| b1584 | speG | +0.8 | 4.5 | spermidine N1-acetyltransferase (NCBI) | compare |
| b0641 | rlpB | +0.8 | 2.5 | minor lipoprotein (NCBI) | compare |
| b1411 | ynbD | +0.8 | 3.3 | predicted phosphatase, inner membrane protein (NCBI) | compare |
| b2450 | yffS | +0.8 | 1.8 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1034 | ycdX | +0.8 | 3.7 | hypothetical protein (NCBI) | compare |
| b0632 | dacA | +0.8 | 5.1 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b0920 | ycbC | +0.8 | 3.5 | conserved inner membrane protein (NCBI) | compare |
| b1632 | rsxE | +0.8 | 5.2 | NADH-ubiquinone oxidoreductase (NCBI) | compare |
| b1865 | nudB | +0.8 | 1.4 | dATP pyrophosphohydrolase (NCBI) | compare |
| b2058 | wcaB | +0.8 | 1.1 | predicted acyl transferase (NCBI) | compare |
| b4431 | rprA | +0.8 | 1.6 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b3860 | dsbA | +0.8 | 5.2 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b1949 | fliQ | +0.8 | 1.1 | flagellar biosynthesis protein Q (NCBI) | compare |
| b1627 | rsxA | +0.7 | 2.8 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b4578 | insP | +0.7 | 2.0 | no description | compare |
| b2593 | yfiH | +0.7 | 4.9 | hypothetical protein (NCBI) | compare |
| b1850 | eda | +0.7 | 2.0 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b1594 | dgsA | +0.7 | 1.9 | DNA-binding transcriptional repressor (NCBI) | compare |
| b4418 | sraB | +0.7 | 1.1 | unknown RNA (NCBI) | compare |
| b2618 | b2618 | +0.7 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b4045 | yjbJ | +0.7 | 2.0 | predicted stress response protein (NCBI) | compare |
| b4413 | sokC | +0.7 | 1.6 | regulatory antisense RNA (NCBI) | compare |
| b1604 | ydgH | +0.7 | 3.9 | hypothetical protein (NCBI) | compare |
| b0737 | tolQ | +0.7 | 1.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1890 | motA | +0.7 | 1.8 | flagellar motor protein MotA (NCBI) | compare |
| b3792 | wzxE | +0.7 | 4.4 | O-antigen translocase (NCBI) | compare |
| b1811 | yoaH | +0.7 | 2.6 | hypothetical protein (NCBI) | compare |
| b4041 | plsB | +0.7 | 1.8 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b1251 | yciI | +0.7 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b2501 | ppk | +0.7 | 4.6 | polyphosphate kinase (NCBI) | compare |
| b4151 | frdD | +0.7 | 2.5 | fumarate reductase subunit D (NCBI) | compare |
| b3794 | rffM | +0.7 | 3.8 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b1253 | yciA | +0.7 | 2.5 | predicted hydrolase (NCBI) | compare |
| b2340 | sixA | +0.7 | 2.9 | phosphohistidine phosphatase (NCBI) | compare |
| b2432 | yfeY | +0.7 | 1.4 | hypothetical protein (NCBI) | compare |
| b1684 | sufA | +0.7 | 1.4 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b2617 | smpA | +0.7 | 1.7 | small membrane protein A (VIMSS) | compare |
| b1667 | ydhR | +0.7 | 0.9 | hypothetical protein (NCBI) | compare |
| b0974 | hyaC | +0.6 | 2.2 | hydrogenase 1, b-type cytochrome subunit (NCBI) | compare |
| b1312 | ycjP | +0.6 | 3.5 | predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b3366 | nirD | +0.6 | 2.0 | nitrite reductase small subunit (NCBI) | compare |
| b1699 | ydiS | +0.6 | 2.1 | predicted oxidoreductase with FAD/NAD(P)-binding domain (NCBI) | compare |
| b2570 | rseC | +0.6 | 2.8 | RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) | compare |
| b1582 | ynfA | +0.6 | 1.8 | hypothetical protein (NCBI) | compare |
| b1629 | rsxC | +0.6 | 3.3 | electron transport complex protein RnfC (NCBI) | compare |
| b2350 | yfdG | +0.6 | 3.8 | CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) (NCBI) | compare |
| b1630 | rsxD | +0.6 | 2.7 | electron transport complex protein RnfD (NCBI) | compare |
| b3890 | yiiF | +0.6 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1295 | ymjA | +0.6 | 1.8 | hypothetical protein (NCBI) | compare |
| b2024 | hisA | +0.6 | 1.3 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b2808 | gcvA | +0.6 | 2.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1355 | b1355 | +0.6 | 2.5 | orf, hypothetical protein (VIMSS) | compare |
| b1183 | umuD | +0.6 | 1.5 | DNA polymerase V, subunit D (NCBI) | compare |
| b0407 | yajC | +0.6 | 1.7 | preprotein translocase subunit YajC (NCBI) | compare |
| b1609 | rstB | +0.6 | 2.2 | sensory histidine kinase in two-component regulatory system with RstA (NCBI) | compare |
| b1161 | ycgX | +0.6 | 0.7 | hypothetical protein (NCBI) | compare |
| b1424 | mdoD | +0.6 | 3.1 | glucan biosynthesis protein, periplasmic (RefSeq) | compare |
| b3611 | yibN | +0.6 | 2.8 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b4545 | ypdJ | +0.6 | 1.3 | no description | compare |
| b2343 | b2343 | +0.6 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4373 | rimI | +0.6 | 1.6 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b0191 | yaeJ | +0.6 | 2.5 | hypothetical protein (NCBI) | compare |
| b3838 | tatB | +0.6 | 3.4 | sec-independent translocase (NCBI) | compare |
| b1289 | ycjD | +0.6 | 1.5 | hypothetical protein (NCBI) | compare |
| b1633 | nth | +0.6 | 2.3 | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) (NCBI) | compare |
| b2904 | gcvH | +0.6 | 1.7 | glycine cleavage system protein H (NCBI) | compare |
| b2768 | ygcP | +0.6 | 1.8 | predicted anti-terminator regulatory protein (NCBI) | compare |
| b1647 | ydhF | +0.6 | 1.5 | predicted oxidoreductase (NCBI) | compare |
| b2187 | yejL | +0.5 | 1.7 | hypothetical protein (NCBI) | compare |
| b4215 | ytfI | +0.5 | 0.9 | hypothetical protein (NCBI) | compare |
| b0263 | afuB | +0.5 | 1.7 | CP4-6 prophage; predicted ferric trasnporter subunit (RefSeq) | compare |
| b3068 | ygjF | +0.5 | 2.0 | G/U mismatch-specific DNA glycosylase (NCBI) | compare |
| b1487 | ddpA | +0.5 | 2.5 | D-ala-D-a la transporter subunit (NCBI) | compare |
| b0393 | rdgC | +0.5 | 3.8 | recombination associated protein (NCBI) | compare |
| b1305 | pspB | +0.5 | 1.7 | phage shock protein B (NCBI) | compare |
| b2236 | yfaE | +0.5 | 2.0 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b0961 | yccF | +0.5 | 2.5 | conserved inner membrane protein (NCBI) | compare |
| b2686 | emrB | +0.5 | 3.4 | multidrug efflux system protein (NCBI) | compare |
| b1842 | holE | +0.5 | 0.9 | DNA polymerase III, theta subunit (NCBI) | compare |
| b0889 | lrp | +0.5 | 1.5 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b2784 | relA | +0.5 | 3.6 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b2531 | iscR | +0.5 | 0.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0015 | dnaJ | +0.5 | 3.3 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b1336 | ydaH | +0.5 | 2.3 | putative pump protein (transport) (VIMSS) | compare |
| b2940 | yqgC | +0.5 | 1.8 | hypothetical protein (NCBI) | compare |
| b2419 | yfeK | +0.5 | 1.0 | hypothetical protein (NCBI) | compare |
| b1349 | recT | +0.5 | 2.8 | Rac prophage; recombination and repair protein (NCBI) | compare |
| b1353 | sieB | +0.5 | 2.4 | phage superinfection exclusion protein (VIMSS) | compare |
| b4451 | ryhB | +0.5 | 0.7 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b2708 | gutQ | +0.5 | 2.7 | orf, hypothetical protein (VIMSS) | compare |
| b0082 | mraW | +0.5 | 1.6 | S-adenosyl-methyltransferase (NCBI) | compare |
| b4692 | oweE | +0.5 | 1.3 | no description | compare |
| b3250 | mreC | +0.5 | 0.6 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b1060 | yceP | +0.5 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b3133 | agaV | +0.5 | 2.4 | PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA) (VIMSS) | compare |
| b0798 | ybiA | +0.5 | 1.4 | hypothetical protein (NCBI) | compare |
| b2910 | zapA | +0.5 | 1.8 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b1419 | ydcA | +0.5 | 2.1 | hypothetical protein (NCBI) | compare |
| b1608 | rstA | +0.5 | 1.9 | DNA-binding response regulator in two-component regulatory system with RstB (RefSeq) | compare |
| b1446 | ydcY | +0.5 | 1.1 | hypothetical protein (NCBI) | compare |
| b4006 | purH | +0.5 | 3.8 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b4397 | creA | +0.5 | 1.6 | hypothetical protein (NCBI) | compare |
| b0504 | ybbS | +0.5 | 1.7 | DNA-binding transcriptional activator of the allD operon (NCBI) | compare |
| b3632 | rfaQ | +0.5 | 4.3 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b2516 | yfgA | +0.5 | 2.4 | hypothetical protein (NCBI) | compare |
| b1603 | pntA | +0.5 | 1.6 | NAD(P) transhydrogenase subunit alpha (NCBI) | compare |
| b1095 | fabF | +0.5 | 2.8 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b4301 | sgcE | +0.5 | 2.9 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b2685 | emrA | +0.5 | 3.3 | multidrug efflux system (NCBI) | compare |
| b1063 | yceB | +0.5 | 1.3 | predicted lipoprotein (NCBI) | compare |
| b2905 | gcvT | +0.5 | 2.6 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b1901 | araF | +0.5 | 2.0 | L-arabinose transporter subunit (NCBI) | compare |
| b1618 | uidR | +0.5 | 1.1 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0088 | murD | +0.5 | 0.7 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b2421 | cysM | +0.5 | 1.4 | cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) | compare |
| b1248 | b1248 | +0.5 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0143 | pcnB | +0.5 | 2.4 | poly(A) polymerase I (VIMSS) | compare |
| b1504 | ydeS | +0.5 | 2.1 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b4515 | ybgT | +0.5 | 1.0 | hypothetical protein (NCBI) | compare |
| b0158 | btuF | +0.5 | 1.9 | vitamin B12-transporter protein BtuF (NCBI) | compare |
| b4093 | phnO | +0.5 | 2.4 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b3940 | metL | +0.5 | 3.4 | bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) | compare |
| b3026 | qseC | +0.5 | 1.4 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b4636 | ybfI | +0.5 | 2.4 | no description | compare |
| b4538 | yoeF | +0.5 | 0.7 | hypothetical protein (RefSeq) | compare |
| b0864 | artP | +0.5 | 1.6 | arginine transporter subunit (NCBI) | compare |
| b4460 | araH | +0.4 | 0.9 | fused L-arabinose transporter subunits of ABC superfamily: membrane components (RefSeq) | compare |
| b2346 | vacJ | +0.4 | 2.4 | predicted lipoprotein (NCBI) | compare |
| b1595 | ynfL | +0.4 | 1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1524 | yneH | +0.4 | 0.5 | predicted glutaminase (NCBI) | compare |
| b2262 | menB | +0.4 | 1.7 | naphthoate synthase (NCBI) | compare |
| b0211 | mltD | +0.4 | 2.8 | predicted membrane-bound lytic murein transglycosylase D (NCBI) | compare |
| b2377 | yfdY | +0.4 | 1.4 | predicted inner membrane protein (NCBI) | compare |
| b1812 | pabB | +0.4 | 2.1 | para-aminobenzoate synthase component I (NCBI) | compare |
| b3761 | trpT | +0.4 | 0.9 | tRNA-Trp (NCBI) | compare |
| b2700 | ygaD | +0.4 | 2.1 | competence damage-inducible protein A (NCBI) | compare |
| b2659 | b2659 | +0.4 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b3378 | yhfU | +0.4 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3627 | rfaI | +0.4 | 2.9 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b2081 | yegQ | +0.4 | 2.5 | predicted peptidase (NCBI) | compare |
| b1514 | lsrC | +0.4 | 0.7 | AI2 transporter (NCBI) | compare |
| b0782 | moaB | +0.4 | 1.0 | molybdopterin biosynthesis protein B (NCBI) | compare |
| b3194 | yrbE | +0.4 | 3.3 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b3120 | yhaB | +0.4 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b0456 | ybaA | +0.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b0946 | ycbW | +0.4 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b2688 | gshA | +0.4 | 2.6 | glutamate--cysteine ligase (NCBI) | compare |
| b4438 | cyaR | +0.4 | 0.8 | sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq) | compare |
| b1038 | csgF | +0.4 | 1.2 | predicted transport protein (NCBI) | compare |
| b3293 | yhdN | +0.4 | 1.2 | hypothetical protein (NCBI) | compare |
| b0157 | yadS | +0.4 | 2.2 | conserved inner membrane protein (NCBI) | compare |
| b0209 | yafD | +0.4 | 2.4 | hypothetical protein (NCBI) | compare |