| | gene | name | fitness | t score | description | |
|---|
| b0462 | acrB | -5.7 | -11.6 | multidrug efflux system protein (NCBI) | compare |
| b0463 | acrA | -5.6 | -7.7 | multidrug efflux system (NCBI) | compare |
| b2188 | yejM | -5.2 | -7.1 | predicted hydrolase, inner membrane (NCBI) | compare |
| b2512 | yfgL | -4.7 | -4.5 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b3035 | tolC | -4.6 | -4.5 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b2494 | yfgC | -4.6 | -8.2 | predicted peptidase (NCBI) | compare |
| b1677 | lpp | -4.3 | -2.9 | murein lipoprotein (NCBI) | compare |
| b3842 | rfaH | -4.2 | -2.9 | transcriptional activator RfaH (NCBI) | compare |
| b1765 | ydjA | -3.7 | -1.9 | predicted oxidoreductase (NCBI) | compare |
| b3199 | yrbK | -3.7 | -3.1 | hypothetical protein (NCBI) | compare |
| b3163 | nlpI | -3.3 | -5.0 | hypothetical protein (NCBI) | compare |
| b3632 | rfaQ | -3.2 | -16.1 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b1830 | prc | -3.2 | -4.4 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b3631 | rfaG | -3.2 | -6.1 | glucosyltransferase I (NCBI) | compare |
| b0990 | cspG | -3.2 | -2.1 | DNA-binding transcriptional regulator (NCBI) | compare |
| b3052 | rfaE | -3.0 | -4.0 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b0677 | nagA | -3.0 | -6.5 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b0222 | lpcA | -2.9 | -2.8 | phosphoheptose isomerase (NCBI) | compare |
| b0053 | surA | -2.9 | -2.9 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3620 | rfaF | -2.9 | -5.2 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3630 | rfaP | -2.9 | -2.8 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b1361 | ydaW | -2.9 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3198 | kdsC | -2.8 | -4.6 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b1236 | galU | -2.8 | -2.7 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0145 | dksA | -2.8 | -3.2 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3600 | mtlD | -2.8 | -12.5 | mannitol-1-phosphate 5-dehydrogenase (NCBI) | compare |
| b1164 | ycgZ | -2.7 | -1.8 | hypothetical protein (NCBI) | compare |
| b1346 | ydaQ | -2.7 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0741 | pal | -2.7 | -3.6 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0957 | ompA | -2.6 | -3.5 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b0740 | tolB | -2.6 | -3.5 | translocation protein TolB precursor (NCBI) | compare |
| b3621 | rfaC | -2.6 | -3.5 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0605 | ahpC | -2.6 | -4.8 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b0737 | tolQ | -2.5 | -1.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2501 | ppk | -2.5 | -9.7 | polyphosphate kinase (NCBI) | compare |
| b0739 | tolA | -2.5 | -1.7 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2642 | yfjW | -2.5 | -1.6 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1855 | lpxM | -2.4 | -6.2 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0683 | fur | -2.4 | -1.6 | ferric uptake regulator (NCBI) | compare |
| b2017 | yefM | -2.3 | -2.7 | orf, hypothetical protein (VIMSS) | compare |
| b1831 | proQ | -2.3 | -5.3 | putative solute/DNA competence effector (NCBI) | compare |
| b2064 | asmA | -2.3 | -4.4 | predicted assembly protein (NCBI) | compare |
| b1291 | sapD | -2.3 | -2.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4480 | hdfR | -2.2 | -5.2 | transcriptional regulator HdfR (NCBI) | compare |
| b0688 | pgm | -2.2 | -3.2 | phosphoglucomutase (NCBI) | compare |
| b3962 | udhA | -2.2 | -6.2 | putative oxidoreductase (VIMSS) | compare |
| b4163 | glyV | -2.2 | -2.1 | tRNA-Gly (NCBI) | compare |
| b3619 | rfaD | -2.2 | -2.9 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b4701 | sokX | -2.2 | -1.4 | sok-related sRNA, function unknown (RefSeq) | compare |
| b0730 | mngR | -2.1 | -1.4 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1863 | ruvC | -2.1 | -1.9 | Holliday junction resolvase (NCBI) | compare |
| b3764 | yifE | -2.1 | -5.5 | hypothetical protein (NCBI) | compare |
| b0630 | lipB | -2.1 | -1.4 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2620 | smpB | -1.9 | -1.8 | SsrA-binding protein (NCBI) | compare |
| b0142 | folK | -1.9 | -0.9 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b2617 | smpA | -1.9 | -2.4 | small membrane protein A (VIMSS) | compare |
| b3229 | sspA | -1.8 | -2.1 | stringent starvation protein A (NCBI) | compare |
| b1882 | cheY | -1.8 | -0.9 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b3341 | rpsG | -1.8 | -1.7 | 30S ribosomal protein S7 (NCBI) | compare |
| b2168 | fruK | -1.8 | -1.6 | 1-phosphofructokinase (NCBI) | compare |
| b4631 | ykgQ | -1.7 | -2.3 | no description | compare |
| b3026 | qseC | -1.7 | -1.7 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b3183 | obgE | -1.7 | -1.1 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1183 | umuD | -1.6 | -2.4 | DNA polymerase V, subunit D (NCBI) | compare |
| b0088 | murD | -1.6 | -2.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b0623 | cspE | -1.6 | -2.3 | cold shock protein E (NCBI) | compare |
| b1476 | fdnI | -1.6 | -1.3 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b1192 | ldcA | -1.6 | -5.1 | L,D-carboxypeptidase A (NCBI) | compare |
| b3839 | tatC | -1.5 | -5.6 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0706 | ybfD | -1.5 | -1.4 | hypothetical protein (NCBI) | compare |
| b0738 | tolR | -1.5 | -1.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3426 | glpD | -1.5 | -3.0 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b3961 | oxyR | -1.5 | -8.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3021 | ygiT | -1.5 | -2.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3628 | rfaB | -1.5 | -6.0 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b1524 | yneH | -1.4 | -1.0 | predicted glutaminase (NCBI) | compare |
| b0437 | clpP | -1.4 | -4.8 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b4220 | ytfM | -1.4 | -9.3 | predicted outer membrane protein and surface antigen (NCBI) | compare |
| b1942 | fliJ | -1.4 | -1.8 | flagellar biosynthesis chaperone (NCBI) | compare |
| b1984 | asnW | -1.4 | -1.4 | tRNA-Asn (NCBI) | compare |
| b4221 | ytfN | -1.4 | -10.8 | hypothetical protein (NCBI) | compare |
| b1109 | ndh | -1.4 | -3.5 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b2363 | yfdT | -1.4 | -2.4 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b1961 | dcm | -1.4 | -1.8 | DNA cytosine methylase (NCBI) | compare |
| b4025 | pgi | -1.4 | -6.4 | glucose-6-phosphate isomerase (NCBI) | compare |
| b3237 | argR | -1.4 | -3.6 | arginine repressor (NCBI) | compare |
| b3082 | ygjM | -1.4 | -1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1848 | yebG | -1.3 | -1.6 | conserved protein regulated by LexA (NCBI) | compare |
| b0014 | dnaK | -1.3 | -1.7 | molecular chaperone DnaK (NCBI) | compare |
| b1290 | sapF | -1.3 | -1.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1332 | ynaJ | -1.3 | -0.8 | predicted inner membrane protein (NCBI) | compare |
| b1600 | mdtJ | -1.3 | -1.5 | multidrug efflux system transporter (NCBI) | compare |
| b4520 | ymgF | -1.3 | -1.6 | hypothetical protein (NCBI) | compare |
| b3250 | mreC | -1.3 | -2.0 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b1259 | yciG | -1.3 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3627 | rfaI | -1.3 | -6.0 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b0767 | ybhE | -1.3 | -3.0 | 6-phosphogluconolactonase (NCBI) | compare |
| b0617 | citD | -1.3 | -2.6 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b4676 | yoaK | -1.3 | -0.8 | expressed protein (RefSeq) | compare |
| b1658 | purR | -1.3 | -4.6 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b0726 | sucA | -1.3 | -3.4 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b2553 | glnB | -1.3 | -3.7 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b1249 | cls | -1.3 | -5.9 | cardiolipin synthetase (NCBI) | compare |
| b2567 | rnc | -1.3 | -0.8 | ribonuclease III (NCBI) | compare |
| b1969 | yedW | -1.3 | -2.9 | putative 2-component transcriptional regulator (VIMSS) | compare |
| b4503 | yafF | -1.2 | -0.8 | no description | compare |
| b3469 | zntA | -1.2 | -5.1 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b4509 | ylcG | -1.2 | -1.5 | DLP12 prophage; predicted protein (NCBI) | compare |
| b4698 | mgrR | -1.2 | -2.8 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b4201 | priB | -1.2 | -2.2 | primosomal replication protein N (NCBI) | compare |
| b3644 | yicC | -1.2 | -4.7 | hypothetical protein (NCBI) | compare |
| b1506 | yneL | -1.2 | -0.8 | predicted transcriptional regulator (NCBI) | compare |
| b3414 | gntY | -1.2 | -4.3 | predicted gluconate transport associated protein (NCBI) | compare |
| b0440 | hupB | -1.2 | -3.4 | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | compare |
| b2894 | xerD | -1.2 | -0.7 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b2935 | tktA | -1.2 | -0.8 | transketolase 1, thiamin-binding (NCBI) | compare |
| b0499 | ylbH | -1.2 | -2.7 | conserved protein, rhs-like (RefSeq) | compare |
| b2236 | yfaE | -1.2 | -2.9 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b0436 | tig | -1.2 | -5.5 | trigger factor (NCBI) | compare |
| b1726 | yniB | -1.1 | -2.2 | predicted inner membrane protein (NCBI) | compare |
| b1730 | ydjO | -1.1 | -0.7 | predicted protein (RefSeq) | compare |
| b2252 | ais | -1.1 | -2.9 | hypothetical protein (NCBI) | compare |
| b4202 | rpsR | -1.1 | -0.7 | 30S ribosomal protein S18 (NCBI) | compare |
| b2820 | recB | -1.1 | -0.7 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0058 | rluA | -1.1 | -4.8 | pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) (NCBI) | compare |
| b3204 | ptsN | -1.1 | -3.4 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b0232 | yafN | -1.1 | -0.7 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3613 | yibP | -1.1 | -0.7 | putative membrane protein (VIMSS) | compare |
| b3728 | pstS | -1.1 | -1.0 | phosphate transporter subunit (NCBI) | compare |
| b2506 | yfgI | -1.1 | -2.0 | hypothetical protein (NCBI) | compare |
| b2808 | gcvA | -1.1 | -2.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3484 | yhhI | -1.1 | -2.0 | predicted transposase (NCBI) | compare |
| b4375 | prfC | -1.1 | -1.7 | peptide chain release factor 3 (NCBI) | compare |
| b3778 | rep | -1.1 | -4.5 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1104 | ycfL | -1.1 | -1.7 | hypothetical protein (NCBI) | compare |
| b2330 | yfcB | -1.0 | -1.3 | putative adenine-specific methylase (VIMSS) | compare |
| b1824 | yobF | -1.0 | -1.9 | hypothetical protein (NCBI) | compare |
| b1742 | b1742 | -1.0 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b0082 | mraW | -1.0 | -2.2 | S-adenosyl-methyltransferase (NCBI) | compare |
| b2895 | fldB | -1.0 | -2.3 | flavodoxin 2 (NCBI) | compare |
| b1861 | ruvA | -1.0 | -1.0 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3446 | yrhB | -1.0 | -3.2 | hypothetical protein (NCBI) | compare |
| b2774 | ygcW | -1.0 | -2.0 | putative oxidoreductase (VIMSS) | compare |
| b0225 | yafQ | -1.0 | -2.6 | predicted toxin of the YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b4179 | vacB | -1.0 | -3.4 | putative enzyme (VIMSS) | compare |
| b3916 | pfkA | -1.0 | -1.3 | 6-phosphofructokinase (NCBI) | compare |
| b2528 | iscA | -1.0 | -1.4 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3726 | pstA | -1.0 | -2.9 | phosphate transporter subunit (NCBI) | compare |
| b4505 | insX | -1.0 | -1.4 | predicted IS protein (RefSeq) | compare |
| b4541 | yehK | -1.0 | -2.7 | hypothetical protein (NCBI) | compare |
| b3389 | aroB | -1.0 | -5.5 | 3-dehydroquinate synthase (NCBI) | compare |
| b3443 | yrhA | -1.0 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b4568 | ytjA | -1.0 | -1.6 | predicted protein (RefSeq) | compare |
| b1579 | intQ | -1.0 | -1.4 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b2369 | evgA | -0.9 | -1.9 | DNA-binding response regulator in two-component regulatory system with EvgS (NCBI) | compare |
| b0149 | mrcB | -0.9 | -6.8 | penicillin-binding protein 1b (NCBI) | compare |
| b2435 | amiA | -0.9 | -3.0 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b1753 | ynjA | -0.9 | -2.0 | hypothetical protein (NCBI) | compare |
| b2007 | yeeX | -0.9 | -2.4 | conserved protein (RefSeq) | compare |
| b4640 | yoeG | -0.9 | -1.3 | no description | compare |
| b2569 | lepA | -0.9 | -2.3 | GTP-binding protein LepA (NCBI) | compare |
| b1344 | ydaO | -0.9 | -3.1 | predicted C32 tRNA thiolase (NCBI) | compare |
| b0547 | ybcN | -0.9 | -1.8 | DLP12 prophage; predicted protein (NCBI) | compare |
| b1269 | rluB | -0.9 | -2.4 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b2375 | yfdX | -0.9 | -1.8 | hypothetical protein (NCBI) | compare |
| b4146 | yjeK | -0.9 | -0.8 | predicted lysine aminomutase (NCBI) | compare |
| b4608 | ryfC | -0.9 | -2.5 | Novel sRNA, function unknown (RefSeq) | compare |
| b2071 | yegJ | -0.9 | -1.1 | hypothetical protein (NCBI) | compare |
| b3811 | xerC | -0.9 | -0.6 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b0724 | sdhB | -0.9 | -4.0 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b1502 | ydeQ | -0.9 | -0.8 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1951 | rcsA | -0.9 | -0.8 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b4383 | deoB | -0.9 | -5.0 | phosphopentomutase (NCBI) | compare |
| b4494 | arpB | -0.9 | -0.6 | no description | compare |
| b1973 | yodA | -0.9 | -2.6 | conserved metal-binding protein (NCBI) | compare |
| b4239 | treC | -0.9 | -1.3 | trehalose-6-P hydrolase (NCBI) | compare |
| b1573 | ydfC | -0.9 | -1.2 | Qin prophage; predicted protein (RefSeq) | compare |
| b4313 | fimE | -0.9 | -4.4 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b4546 | ypeB | -0.9 | -0.9 | hypothetical protein (NCBI) | compare |
| b0722 | sdhD | -0.8 | -2.9 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b0263 | afuB | -0.8 | -2.0 | CP4-6 prophage; predicted ferric trasnporter subunit (RefSeq) | compare |
| b1123 | potD | -0.8 | -3.1 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b2498 | upp | -0.8 | -1.6 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b3290 | trkA | -0.8 | -0.8 | potassium transporter peripheral membrane component (NCBI) | compare |
| b3629 | rfaS | -0.8 | -1.4 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b4260 | pepA | -0.8 | -5.5 | leucyl aminopeptidase (NCBI) | compare |
| b3650 | spoT | -0.8 | -3.4 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b4000 | hupA | -0.8 | -2.1 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b1159 | mcrA | -0.8 | -0.5 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b1309 | ycjM | -0.8 | -2.1 | putative polysaccharide hydrolase (VIMSS) | compare |
| b4515 | ybgT | -0.8 | -1.2 | hypothetical protein (NCBI) | compare |
| b1108 | ycfP | -0.8 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b3868 | glnG | -0.8 | -2.5 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b0469 | apt | -0.8 | -3.8 | adenine phosphoribosyltransferase (NCBI) | compare |
| b3247 | cafA | -0.8 | -4.7 | bundles of cytoplasmic filaments (VIMSS) | compare |
| b4579 | yaiX | -0.8 | -2.7 | no description | compare |
| b4588 | ylcH | -0.8 | -2.6 | hypothetical protein, DLP12 prophage (RefSeq) | compare |
| b4622 | ytcA | -0.8 | -3.1 | hypothetical protein (RefSeq) | compare |
| b2215 | ompC | -0.8 | -4.6 | outer membrane porin protein C (NCBI) | compare |
| b2144 | sanA | -0.8 | -5.1 | hypothetical protein (NCBI) | compare |