| | gene | name | fitness | t score | description | |
|---|
| b0464 | acrR | +8.6 | 59.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1684 | sufA | +7.4 | 18.3 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b2688 | gshA | +5.3 | 32.8 | glutamate--cysteine ligase (NCBI) | compare |
| b3493 | pitA | +5.0 | 34.2 | phosphate transporter, low-affinity (NCBI) | compare |
| b2175 | spr | +4.4 | 21.6 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b0439 | lon | +4.1 | 21.6 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b1676 | pykF | +3.7 | 20.0 | pyruvate kinase (NCBI) | compare |
| b2947 | gshB | +3.6 | 15.6 | glutathione synthetase (NCBI) | compare |
| b0605 | ahpC | +3.4 | 6.9 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b3164 | pnp | +3.1 | 9.1 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b1804 | rnd | +2.6 | 12.3 | ribonuclease D (NCBI) | compare |
| b1205 | ychH | +2.5 | 5.2 | predicted inner membrane protein (NCBI) | compare |
| b2684 | mprA | +2.4 | 11.7 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b4179 | vacB | +2.4 | 12.1 | putative enzyme (VIMSS) | compare |
| b3410 | yhgG | +2.4 | 15.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4402 | yjjY | +2.4 | 4.6 | hypothetical protein (NCBI) | compare |
| b3409 | feoB | +2.3 | 21.4 | ferrous iron transport protein B (NCBI) | compare |
| b3198 | kdsC | +2.2 | 11.0 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b3250 | mreC | +2.2 | 1.3 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b3408 | feoA | +2.1 | 16.2 | ferrous iron transport protein A (NCBI) | compare |
| b4025 | pgi | +2.0 | 13.5 | glucose-6-phosphate isomerase (NCBI) | compare |
| b4089 | rpiR | +2.0 | 15.0 | transcriptional repressor of rpiB expression (VIMSS) | compare |
| b4215 | ytfI | +1.9 | 4.2 | hypothetical protein (NCBI) | compare |
| b3778 | rep | +1.9 | 12.3 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3009 | yghB | +1.9 | 10.0 | conserved inner membrane protein (NCBI) | compare |
| b3916 | pfkA | +1.8 | 6.2 | 6-phosphofructokinase (NCBI) | compare |
| b0853 | ybjN | +1.7 | 9.6 | predicted oxidoreductase (NCBI) | compare |
| b2912 | ygfA | +1.7 | 6.9 | putative ligase (VIMSS) | compare |
| b3546 | yhjW | +1.7 | 15.1 | orf, hypothetical protein (VIMSS) | compare |
| b3791 | rffA | +1.7 | 9.2 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b3836 | b3836 | +1.6 | 5.8 | orf, hypothetical protein (VIMSS) | compare |
| b2683 | ygaH | +1.6 | 4.4 | predicted inner membrane protein (NCBI) | compare |
| b4572 | ylbE | +1.6 | 2.0 | no description | compare |
| b0926 | ycbK | +1.6 | 5.7 | hypothetical protein (NCBI) | compare |
| b1249 | cls | +1.6 | 9.7 | cardiolipin synthetase (NCBI) | compare |
| b0606 | ahpF | +1.5 | 6.9 | alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides (VIMSS) | compare |
| b3977 | tyrU | +1.5 | 1.9 | tRNA-Tyr (NCBI) | compare |
| b3397 | nudE | +1.5 | 11.0 | ADP-ribose diphosphatase (NCBI) | compare |
| b4481 | rffT | +1.5 | 8.1 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1850 | eda | +1.4 | 1.7 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b1095 | fabF | +1.4 | 9.1 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b3912 | cpxR | +1.4 | 9.4 | DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) | compare |
| b0448 | mdlA | +1.4 | 10.8 | fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b2659 | b2659 | +1.4 | 2.7 | orf, hypothetical protein (VIMSS) | compare |
| b2516 | yfgA | +1.4 | 4.3 | hypothetical protein (NCBI) | compare |
| b1882 | cheY | +1.4 | 1.1 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b0889 | lrp | +1.3 | 1.7 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b1349 | recT | +1.3 | 6.3 | Rac prophage; recombination and repair protein (NCBI) | compare |
| b4373 | rimI | +1.3 | 4.7 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b2502 | ppx | +1.3 | 8.1 | exopolyphosphatase (NCBI) | compare |
| b3166 | truB | +1.3 | 8.1 | tRNA pseudouridine synthase B (NCBI) | compare |
| b1286 | rnb | +1.2 | 3.3 | exoribonuclease II (NCBI) | compare |
| b3806 | cyaA | +1.2 | 5.8 | adenylate cyclase (NCBI) | compare |
| b3790 | rffC | +1.2 | 7.3 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b1811 | yoaH | +1.2 | 4.7 | hypothetical protein (NCBI) | compare |
| b2236 | yfaE | +1.2 | 2.4 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b2593 | yfiH | +1.2 | 8.6 | hypothetical protein (NCBI) | compare |
| b2058 | wcaB | +1.2 | 1.7 | predicted acyl transferase (NCBI) | compare |
| b0449 | mdlB | +1.2 | 8.6 | fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b3006 | exbB | +1.2 | 8.2 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b1712 | ihfA | +1.2 | 1.6 | integration host factor subunit alpha (NCBI) | compare |
| b3401 | yrfI | +1.2 | 6.8 | orf, hypothetical protein (VIMSS) | compare |
| b0912 | ihfB | +1.2 | 3.0 | integration host factor subunit beta (NCBI) | compare |
| b2350 | yfdG | +1.2 | 6.0 | CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) (NCBI) | compare |
| b1661 | cfa | +1.1 | 5.8 | cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) (NCBI) | compare |
| b2582 | trxC | +1.1 | 4.7 | thioredoxin 2 (NCBI) | compare |
| b0632 | dacA | +1.1 | 7.6 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b3005 | exbD | +1.1 | 6.4 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b2448 | yffQ | +1.1 | 2.3 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b3741 | gidA | +1.1 | 4.2 | glucose-inhibited division protein A (NCBI) | compare |
| b4651 | yibW | +1.1 | 0.5 | no description | compare |
| b1556 | b1556 | +1.1 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b2421 | cysM | +1.1 | 4.4 | cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) | compare |
| b1010 | ycdK | +1.1 | 5.8 | hypothetical protein (NCBI) | compare |
| b1217 | chaB | +1.1 | 1.5 | cation transport regulator (NCBI) | compare |
| b1686 | ydiI | +1.1 | 2.6 | hypothetical protein (NCBI) | compare |
| b4647 | mokA | +1.1 | 0.5 | no description | compare |
| b2343 | b2343 | +1.1 | 2.5 | orf, hypothetical protein (VIMSS) | compare |
| b1854 | pykA | +1.1 | 6.3 | pyruvate kinase (NCBI) | compare |
| b2810 | csdA | +1.0 | 5.9 | cysteine sulfinate desulfinase (NCBI) | compare |
| b1273 | yciN | +1.0 | 2.4 | hypothetical protein (NCBI) | compare |
| b3600 | mtlD | +1.0 | 7.1 | mannitol-1-phosphate 5-dehydrogenase (NCBI) | compare |
| b3527 | yhjJ | +1.0 | 9.0 | predicted zinc-dependent peptidase (NCBI) | compare |
| b3504 | yhiS | +1.0 | 0.5 | hypothetical protein (RefSeq) | compare |
| b0549 | ybcO | +1.0 | 3.1 | DLP12 prophage; predicted protein (NCBI) | compare |
| b2635 | ypjK | +1.0 | 3.0 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b4660 | yhiL | +1.0 | 0.5 | no description | compare |
| b1607 | ydgC | +1.0 | 1.8 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b0407 | yajC | +1.0 | 2.7 | preprotein translocase subunit YajC (NCBI) | compare |
| b2181 | yejG | +1.0 | 3.4 | hypothetical protein (NCBI) | compare |
| b3442 | yhhZ | +1.0 | 0.5 | hypothetical protein (NCBI) | compare |
| b0065 | yabI | +1.0 | 4.8 | conserved inner membrane protein (NCBI) | compare |
| b1012 | b1012 | +1.0 | 3.7 | orf, hypothetical protein (VIMSS) | compare |
| b3959 | argB | +1.0 | 6.5 | acetylglutamate kinase (RefSeq) | compare |
| b1111 | ycfQ | +1.0 | 2.8 | orf, hypothetical protein (VIMSS) | compare |
| b3780 | rhlB | +1.0 | 7.0 | ATP-dependent RNA helicase (NCBI) | compare |
| b0143 | pcnB | +1.0 | 5.4 | poly(A) polymerase I (VIMSS) | compare |
| b2682 | ygaZ | +0.9 | 1.7 | predicted transporter (NCBI) | compare |
| b1827 | kdgR | +0.9 | 3.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1148 | ymfM | +0.9 | 1.3 | e14 prophage; predicted protein (NCBI) | compare |
| b3706 | trmE | +0.9 | 3.1 | tRNA modification GTPase (NCBI) | compare |
| b3463 | ftsE | +0.9 | 0.6 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b3725 | pstB | +0.9 | 0.6 | phosphate transporter subunit (NCBI) | compare |
| b1097 | yceG | +0.9 | 3.9 | predicted aminodeoxychorismate lyase (NCBI) | compare |
| b4483 | tatD | +0.9 | 4.4 | DNase, magnesium-dependent (NCBI) | compare |
| b3842 | rfaH | +0.9 | 2.4 | transcriptional activator RfaH (NCBI) | compare |
| b2259 | pmrD | +0.9 | 1.1 | polymyxin resistance protein B (VIMSS) | compare |
| b4371 | rsmC | +0.9 | 5.8 | 16S ribosomal RNA m2G1207 methyltransferase (NCBI) | compare |
| b2708 | gutQ | +0.9 | 3.6 | orf, hypothetical protein (VIMSS) | compare |
| b3740 | gidB | +0.9 | 6.8 | glucose-inhibited division protein B (NCBI) | compare |
| b2398 | yfeC | +0.9 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b4409 | blr | +0.9 | 4.2 | beta-lactam resistance membrane protein (NCBI) | compare |
| b1782 | mipA | +0.9 | 2.7 | scaffolding protein for murein synthesizing machinery (NCBI) | compare |
| b2812 | ygdL | +0.9 | 5.2 | hypothetical protein (NCBI) | compare |
| b4387 | ytjB | +0.9 | 5.0 | hypothetical protein (NCBI) | compare |
| b3121 | yhaC | +0.9 | 0.4 | hypothetical protein (NCBI) | compare |
| b4279 | yjhB | +0.9 | 0.4 | putative transport protein (VIMSS) | compare |
| b4201 | priB | +0.9 | 2.3 | primosomal replication protein N (NCBI) | compare |
| b4650 | yibS | +0.8 | 1.5 | no description | compare |
| b1263 | trpD | +0.8 | 1.9 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b1009 | rarA | +0.8 | 2.9 | predicted hydrolase (NCBI) | compare |
| b4128 | yjdK | +0.8 | 0.5 | hypothetical protein (NCBI) | compare |
| b1594 | dgsA | +0.8 | 2.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1418 | cybB | +0.8 | 2.2 | cytochrome b(561) (VIMSS) | compare |
| b3348 | slyX | +0.8 | 2.4 | hypothetical protein (NCBI) | compare |
| b1008 | ycdI | +0.8 | 2.3 | hypothetical protein (NCBI) | compare |
| b2134 | pbpG | +0.8 | 4.1 | penicillin-binding protein 7 (VIMSS) | compare |
| b3027 | ygiZ | +0.8 | 0.4 | conserved inner membrane protein (NCBI) | compare |
| b3611 | yibN | +0.8 | 3.5 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b0114 | aceE | +0.8 | 1.2 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b4066 | yjcF | +0.8 | 0.4 | hypothetical protein (NCBI) | compare |
| b3622 | rfaL | +0.8 | 1.7 | O-antigen ligase (NCBI) | compare |
| b1066 | rimJ | +0.8 | 4.6 | ribosomal-protein-S5-alanine N-acetyltransferase (NCBI) | compare |
| b4036 | lamB | +0.8 | 5.8 | maltoporin precursor (NCBI) | compare |
| b2614 | grpE | +0.8 | 1.7 | heat shock protein (NCBI) | compare |
| b3838 | tatB | +0.8 | 4.2 | sec-independent translocase (NCBI) | compare |
| b2951 | yggS | +0.8 | 3.9 | predicted enzyme (NCBI) | compare |
| b1429 | tehA | +0.8 | 1.0 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b2847 | yqeI | +0.8 | 0.4 | predicted transcriptional regulator (NCBI) | compare |
| b2853 | ygeI | +0.8 | 0.4 | hypothetical protein (NCBI) | compare |
| b3386 | rpe | +0.8 | 0.7 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b0211 | mltD | +0.8 | 4.8 | predicted membrane-bound lytic murein transglycosylase D (NCBI) | compare |
| b2700 | ygaD | +0.8 | 3.6 | competence damage-inducible protein A (NCBI) | compare |
| b3623 | rfaK | +0.8 | 0.5 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b4041 | plsB | +0.8 | 1.9 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b1651 | gloA | +0.7 | 2.0 | glyoxalase I, Ni-dependent (NCBI) | compare |
| b4155 | yjeA | +0.7 | 0.4 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b0852 | rimK | +0.7 | 3.5 | ribosomal protein S6 modification protein (NCBI) | compare |
| b3190 | yrbA | +0.7 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b2506 | yfgI | +0.7 | 1.4 | hypothetical protein (NCBI) | compare |
| b4407 | thiS | +0.7 | 1.8 | sulfur carrier protein ThiS (NCBI) | compare |
| b0658 | ybeX | +0.7 | 0.7 | predicteed ion transport (NCBI) | compare |
| b4173 | hflX | +0.7 | 3.3 | predicted GTPase (NCBI) | compare |
| b2673 | nrdH | +0.7 | 1.1 | glutaredoxin-like protein (NCBI) | compare |
| b0118 | acnB | +0.7 | 0.4 | aconitate hydratase (NCBI) | compare |
| b4443 | gcvB | +0.7 | 0.4 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b0195 | yaeB | +0.7 | 4.0 | hypothetical protein (NCBI) | compare |
| b3029 | ygiN | +0.7 | 2.1 | quinol monooxygenase (NCBI) | compare |
| b0217 | yafT | +0.7 | 2.6 | predicted aminopeptidase (NCBI) | compare |
| b3875 | ompL | +0.7 | 1.1 | predicted outer membrane porin L (NCBI) | compare |
| b3418 | malT | +0.7 | 5.7 | transcriptional regulator MalT (NCBI) | compare |
| b1883 | cheB | +0.7 | 2.8 | chemotaxis-specific methylesterase (NCBI) | compare |
| b2791 | yqcB | +0.7 | 3.2 | tRNA pseudouridine synthase (NCBI) | compare |
| b2532 | yfhQ | +0.7 | 2.9 | predicted methyltransferase (NCBI) | compare |
| b3210 | arcB | +0.7 | 2.7 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b3624 | rfaZ | +0.7 | 0.9 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b2946 | yggJ | +0.7 | 2.8 | orf, hypothetical protein (VIMSS) | compare |
| b1593 | b1593 | +0.7 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b4017 | arpA | +0.7 | 1.5 | regulator of acetyl CoA synthetase (NCBI) | compare |
| b3350 | kefB | +0.7 | 5.5 | glutathione-regulated potassium-efflux system protein (NCBI) | compare |
| b0191 | yaeJ | +0.7 | 2.5 | hypothetical protein (NCBI) | compare |
| b0847 | ybjL | +0.7 | 2.9 | hypothetical protein (NCBI) | compare |
| b0121 | speE | +0.7 | 3.1 | spermidine synthase (NCBI) | compare |
| b2564 | pdxJ | +0.7 | 1.5 | pyridoxal phosphate biosynthetic protein (NCBI) | compare |
| b1186 | nhaB | +0.7 | 3.3 | NhaB sodium/proton transporter (Katherine Huang) | compare |
| b3028 | mdaB | +0.6 | 2.6 | NADPH quinone reductase (NCBI) | compare |
| b1618 | uidR | +0.6 | 2.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1959 | yedA | +0.6 | 2.5 | predicted inner membrane protein (NCBI) | compare |
| b3500 | gor | +0.6 | 1.1 | glutathione reductase (NCBI) | compare |
| b2771 | ygcS | +0.6 | 3.2 | putative transport protein (VIMSS) | compare |
| b1610 | tus | +0.6 | 3.0 | DNA replication terminus site-binding protein (NCBI) | compare |
| b3911 | cpxA | +0.6 | 4.7 | two-component sensor protein (NCBI) | compare |
| b0425 | panE | +0.6 | 4.0 | 2-dehydropantoate 2-reductase (NCBI) | compare |
| b4704 | arrS | +0.6 | 0.3 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b2356 | yfdM | +0.6 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b0500 | ybbD | +0.6 | 0.3 | hypothetical protein (RefSeq) | compare |
| b0393 | rdgC | +0.6 | 4.0 | recombination associated protein (NCBI) | compare |
| b2625 | yfjI | +0.6 | 0.8 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b4391 | yjjK | +0.6 | 4.3 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1350 | recE | +0.6 | 2.5 | Rac prophage; exonuclease VIII, 5' -> 3' specific dsDNA exonuclease (NCBI) | compare |
| b1502 | ydeQ | +0.6 | 1.0 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b0279 | yagM | +0.6 | 0.4 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b3993 | thiE | +0.6 | 1.7 | thiamine-phosphate pyrophosphorylase (NCBI) | compare |
| b1948 | fliP | +0.6 | 1.3 | flagellar biosynthesis protein P (NCBI) | compare |
| b4175 | hflC | +0.6 | 4.0 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b3812 | yigB | +0.6 | 2.9 | predicted hydrolase (NCBI) | compare |
| b3483 | yhhH | +0.6 | 0.3 | orf, hypothetical protein (VIMSS) | compare |
| b3926 | glpK | +0.6 | 5.1 | glycerol kinase (NCBI) | compare |
| b1582 | ynfA | +0.6 | 1.6 | hypothetical protein (NCBI) | compare |
| b0603 | ybdO | +0.6 | 0.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |