Experiment set10IT019 for Agrobacterium fabrum C58

Compare to:

Asolectin from soybean carbon source

200 most important genes:

  gene name fitness t score description  
Atu1845 -5.4 -3.9 phosphoribosylformylglycinamidine synthase I compare
Atu1850 -5.1 -4.5 phosphoribosylformylglycinamidine synthetase II compare
Atu0041 -4.8 -3.0 glutamine amidotransferase compare
Atu1030 -4.8 -2.7 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0017 -4.7 -4.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2791 -3.9 -8.4 3-isopropylmalate dehydrogenase compare
Atu2036 -3.8 -16.6 acetolactate synthase III, large subunit compare
Atu3755 -3.8 -5.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1750 -3.7 -3.8 phosphoribosyl c-AMP cyclohydrolase compare
Atu1844 -3.6 -3.2 Phosphoribosylformylglycinamidine synthetase compare
Atu1308 -3.6 -9.7 aspartate carbamoyl transferase catalytic subunit compare
Atu0647 -3.5 -6.5 phosphoribosylamine--glycine ligase compare
Atu4773 -3.5 -2.2 two component response regulator compare
Atu0432 -3.4 -8.6 O-succinylhomoserine sulfhydrylase compare
Atu0400 -3.4 -6.2 orotate phosphoribosyltransferase compare
Atu1588 -3.4 -8.4 homoserine dehydrogenase compare
Atu3885 -3.3 -11.7 inositol monophosphatase compare
Atu1687 -3.3 -7.7 anthranilate phosphoribosyltransferase compare
Atu3763 -3.2 -2.0 hypothetical protein compare
Atu1359 -3.2 -1.5 dnaK deletion suppressor protein compare
Atu0040 -3.2 -1.4 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3707 -3.2 -3.6 phosphoserine aminotransferase compare
Atu0536 -3.1 -8.7 hypothetical protein compare
Atu1205 -3.1 -14.3 threonine dehydratase compare
Atu2718 -3.1 -7.5 homoserine O-succinyltransferase compare
Atu1141 -3.0 -5.2 Phosphoribosylglycinamide synthetase compare
Atu2709 -3.0 -12.2 3-isopropylmalate dehydratase, large subunit compare
Atu0298 -3.0 -6.5 orotidine 5 compare
Atu2790 -3.0 -2.5 3-isopropylmalate dehydratase, small subunit compare
Atu0537 -3.0 -9.6 histidinol dehydrogenase compare
Atu2289 -3.0 -14.3 anthranilate synthase component I and II compare
Atu1438 -2.9 -7.5 transcriptional regulator, AraC family compare
Atu1688 -2.9 -9.2 indole-3-glycerol-phosphate synthase compare
Atu0678 -2.9 -6.2 histidyl-tRNA synthetase compare
Atu1075 -2.9 -7.7 amidophosphoribosyltransferase compare
Atu0047 -2.9 -11.6 malate synthase G compare
Atu2264 -2.9 -7.9 2-isopropylmalate synthase compare
Atu0043 -2.9 -3.0 imidazoleglycerol-phosphate dehydratase compare
Atu0486 -2.8 -4.3 dihydroorotate dehydrogenase compare
Atu0099 -2.8 -10.0 prephenate dehydratase compare
Atu1437 -2.7 -4.5 hypothetical protein compare
Atu0038 -2.6 -3.0 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1307 -2.6 -8.7 dihydroorotase compare
Atu0039 -2.6 -3.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu0607 -2.6 -12.8 isocitrate lyase compare
Atu1140 -2.5 -5.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0608 -2.5 -12.9 transcriptional regulator compare
Atu0803 -2.4 -13.4 pyruvate,orthophosphate dikinase compare
Atu0399 -2.4 -6.2 dihydroorotase compare
Atu3754 -2.3 -2.7 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3706 -2.3 -6.3 D-3-phosphoglycerate dehydrogenase compare
Atu0679 -2.2 -4.3 ATP phosphoribosyltransferase compare
Atu2747 -2.1 -8.1 hypothetical protein compare
Atu2040 -2.1 -5.0 phosphoserine phosphatase compare
Atu1686 -1.9 -10.6 peptidyl-prolyl cis-trans isomerse D compare
Atu3739 -1.9 -2.0 phosphoglycerate kinase compare
Atu2207 -1.8 -2.3 two component sensor kinase compare
Atu3469 -1.8 -3.1 phosphoglyceromutase compare
Atu2684 -1.8 -2.3 hypothetical protein compare
Atu0876 -1.7 -2.4 superoxide dismutase compare
Atu0035 -1.7 -6.7 phosphoenolpyruvate carboxykinase compare
Atu3731 -1.7 -5.7 5-formyltetrahydrofolate cyclo-ligase compare
Atu3017 -1.7 -1.4 phosphoglyceromutase compare
Atu0606 -1.7 -2.4 hypothetical protein compare
Atu1760 -1.6 -1.3 hypothetical protein compare
Atu0030 -1.6 -1.6 phosphocarrier protein HPr compare
Atu2726 -1.6 -10.2 pyruvate carboxylase compare
Atu2439 -1.5 -1.3 hypothetical protein compare
Atu3740 -1.5 -6.2 fructose bisphosphate aldolase compare
Atu2225 -1.4 -5.6 transcriptional regulator compare
Atu0354 -1.3 -2.0 ferric uptake regulator compare
Atu2015 -1.3 -6.4 aminotransferase compare
Atu2017 -1.3 -1.0 hypothetical protein compare
Atu1454 -1.3 -4.5 siroheme synthase compare
Atu1589 -1.3 -4.4 aminotransferase, class I compare
Atu4217 -1.3 -1.2 TetR family transcriptional regulator compare
Atu4505 -1.3 -4.9 LacI family transcriptional regulator compare
Atu0413 -1.3 -2.0 stress induced protein compare
Atu2633 -1.2 -1.4 RhtB family transporter compare
Atu1339 -1.2 -3.2 ribonuclease E compare
Atu2224 -1.2 -4.0 aldehyde dehydrogenase compare
Atu3783 -1.2 -7.3 glutamate synthase subunit beta compare
Atu4792 -1.2 -1.5 hypothetical protein compare
Atu2270 -1.2 -1.6 ATP-dependent Clp protease, proteolytic subunit compare
Atu0029 -1.2 -3.6 S-adenosylhomocysteine hydrolase compare
Atu0025 -1.1 -1.6 hypothetical protein compare
Atu0566 -1.1 -1.6 hypothetical protein compare
Atu3784 -1.1 -8.0 glutamate synthase large subunit compare
Atu2155 -1.1 -8.4 methionine synthase compare
Atu2745 -1.1 -6.7 acetyl-coenzyme A synthetase compare
Atu4711 -1.1 -3.0 two component sensor kinase compare
Atu3482 -1.1 -3.7 pantoate--beta-alanine ligase compare
Atu2125 -1.1 -1.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu3486 -1.0 -1.3 DeoR family transcriptional regulator compare
Atu4098 -1.0 -5.4 quinolinate synthetase compare
Atu6036 -1.0 -1.1 entry-exclusion protein compare
Atu1456 -1.0 -4.8 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu2077 -1.0 -1.8 DNA polymerase III, epsilon subunit compare
Atu2548 -1.0 -5.9 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu2432 -1.0 -1.2 hypothetical protein compare
Atu4144 -1.0 -0.8 hypothetical protein compare
Atu4094 -1.0 -3.9 hypothetical protein compare
Atu2484 -1.0 -1.2 hypothetical protein compare
Atu1620 -1.0 -6.5 triosephosphate isomerase compare
Atu1405 -1.0 -3.4 transcriptional regulator, GntR family compare
Atu6098 -1.0 -0.8 transcriptional regulator, HTH family compare
Atu5115 -1.0 -1.5 hypothetical protein compare
Atu0894 -1.0 -1.4 ABC transporter, membrane spanning protein compare
Atu0401 -0.9 -3.5 fructokinase compare
Atu3413 -0.9 -2.5 AsnC family transcriptional regulator compare
Atu0598 -0.9 -3.2 phosphogluconate dehydratase compare
Atu1725 -0.9 -1.6 hypothetical protein compare
Atu2532 -0.9 -2.1 transcriptional regulator, MarR family compare
Atu0269 -0.9 -2.3 exodeoxyribonuclease VII large subunit compare
Atu4541 -0.9 -2.0 carboxymuconolactone decarboxylase compare
Atu0626 -0.9 -4.3 alcohol dehydrogenase compare
Atu0205 -0.9 -5.1 methylmalonate-semialdehyde dehydrogenase compare
Atu4050 -0.9 -2.4 UTP-glucose-1-phosphate uridylyltransferase compare
Atu3727 -0.8 -1.8 hypothetical protein compare
Atu2115 -0.8 -3.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu1515 -0.8 -1.7 hypothetical protein compare
Atu4451 -0.8 -4.6 mannitol 2-dehydrogenase compare
Atu3910 -0.8 -2.7 LamB/YcsF family protein compare
Atu0641 -0.8 -2.3 hypothetical protein compare
Atu2650 -0.8 -4.2 glycerol-3-phosphate dehydrogenase compare
Atu0201 -0.8 -1.3 hypothetical protein compare
Atu0434 -0.8 -1.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3730 -0.8 -0.8 hypothetical protein compare
Atu0503 -0.8 -4.6 enoyl-CoA hydratase compare
Atu4514 -0.8 -2.1 RpiR family transcriptional regulator compare
Atu3750 -0.8 -1.9 thiamine-phosphate pyrophosphorylase compare
Atu4674 -0.8 -4.0 GntR family transcriptional regulator compare
Atu8166 -0.8 -3.1 hypothetical protein compare
Atu1748 -0.8 -3.6 NIFU-like protein compare
Atu0895 -0.7 -1.3 ABC transporter, substrate binding protein compare
Atu3483 -0.7 -1.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu0726 -0.7 -3.9 ring hydroxylating dioxygenase, alpha-subunit compare
Atu2368 -0.7 -0.9 hypothetical protein compare
Atu0677 -0.7 -1.1 hypothetical protein compare
Atu4096 -0.7 -2.7 nicotinate-nucleotide pyrophosphorylase compare
Atu4878 -0.7 -3.3 hypothetical protein compare
Atu0718 -0.7 -1.4 hypothetical protein compare
Atu0062 -0.7 -4.1 transcriptional regulator, ROK family compare
Atu0846 -0.7 -2.9 transcriptional regulator, MarR family compare
Atu2805 -0.7 -2.6 cobalamin synthesis protein compare
Atu1572 -0.7 -3.3 hydrolase compare
Atu5125 -0.7 -1.9 GntR family transcriptional regulator compare
Atu2794 -0.7 -2.6 uroporphyrin-III C-methyltransferase compare
Atu0477 -0.7 -1.0 hypothetical protein compare
Atu3337 -0.7 -3.2 LacI family transcriptional regulator compare
Atu0319 -0.7 -0.8 ubiquinone biosynthesis protein compare
Atu4097 -0.7 -3.8 L-aspartate oxidase compare
Atu0502 -0.7 -2.7 acetyl-CoA acetyltransferase compare
Atu0166 -0.7 -1.9 hypothetical protein compare
Atu1581 -0.7 -1.0 hypothetical protein compare
Atu2634 -0.7 -1.3 hypothetical protein compare
Atu3095 -0.7 -1.1 hypothetical protein compare
Atu2793 -0.7 -3.0 cobyrinic acid a,c-diamide synthase compare
Atu1427 -0.7 -1.6 hypothetical protein compare
Atu3021 -0.7 -2.9 sugar ABC transporter ATPase compare
Atu0115 -0.7 -0.6 hypothetical protein compare
Atu0702 -0.7 -2.1 calcium-binding protein, regucalcin compare
Atu8115 -0.7 -2.9 Hypothetical Protein compare
Atu1182 -0.7 -0.9 hypothetical protein compare
Atu1902 -0.7 -2.8 transketolase compare
Atu4897 -0.7 -0.7 hypothetical protein compare
Atu3026 -0.7 -2.6 short chain dehydrogenase compare
Atu0981 -0.7 -4.1 glutamate-ammonia-ligase adenylyltransferase compare
Atu3733 -0.7 -0.8 hypothetical protein compare
Atu5146 -0.6 -1.6 hypothetical protein compare
Atu0501 -0.6 -3.7 acyl-CoA dehydrogenase compare
Atu4686 -0.6 -1.6 hypothetical protein compare
Atu2807 -0.6 -2.7 cob(I)alamin adenosyltransferase compare
Atu8088 -0.6 -1.3 hypothetical protein compare
Atu0447 -0.6 -2.2 hypothetical protein compare
Atu6138 -0.6 -3.2 Repressor of the acc and arc operons compare
Atu4873 -0.6 -2.0 TetR family transcriptional regulator compare
Atu4887 -0.6 -1.5 hypothetical protein compare
Atu3264 -0.6 -1.8 IclR family transcriptional regulator compare
Atu4151 -0.6 -1.8 LysR family transcriptional regulator compare
Atu2789 -0.6 -1.3 hypothetical protein compare
Atu2194 -0.6 -1.6 hypothetical protein compare
Atu5164 -0.6 -0.6 type IV secretion protein AvhB3 compare
Atu0498 -0.6 -3.0 hypothetical protein compare
Atu6106 -0.6 -1.7 conserved hypothetical protein compare
Atu0185 -0.6 -2.0 methylglyoxal synthase compare
Atu0751 -0.6 -2.0 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu4068 -0.6 -0.6 sarcosine oxidase delta subunit compare
Atu1254 -0.6 -0.6 transcriptional regulator, ArsR family compare
Atu5485 -0.6 -1.5 hypothetical protein compare
Atu2123 -0.6 -3.0 methylenetetrahydrofolate reductase compare
Atu3023 -0.6 -2.9 sugar ABC transporter permease compare
Atu2802 -0.6 -3.3 precorrin-8X methylmutase compare
Atu3033 -0.6 -2.4 hypothetical protein compare
Atu1607 -0.6 -1.2 DNA repair protein compare
Atu1076 -0.6 -1.4 colicin V production protein compare
Atu0590 -0.6 -2.6 transcriptional regulator repressor compare
Atu2237 -0.6 -2.4 cytochrome c1 compare
Atu2376 -0.6 -0.9 hypothetical protein compare
Atu0792 -0.6 -2.6 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Asolectin from soybean in Agrobacterium fabrum C58

For carbon source Asolectin from soybean across organisms