Experiment set10IT017 for Agrobacterium fabrum C58

Compare to:

Lactulose carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu1573 +1.1 2.7 hypothetical protein compare
Atu0142 +1.0 2.4 cytochrome o ubiquinol oxidase subunit II compare
Atu4144 +0.9 1.5 hypothetical protein compare
Atu3012 +0.9 1.6 hypothetical protein compare
Atu0026 +0.8 1.5 hypothetical protein compare
Atu1470 +0.8 1.5 Camphor resistance protein compare
Atu0225 +0.8 1.2 hypothetical protein compare
Atu0976 +0.8 1.6 cycL protein compare
Atu8195 +0.8 1.4 hypothetical protein compare
Atu2067 +0.7 1.2 hypothetical protein compare
Atu3001 +0.7 1.5 hypothetical protein compare
Atu1566 +0.7 1.1 hypothetical protein compare
Atu2450 +0.7 2.8 hypothetical protein compare
Atu0562 +0.6 2.3 flagellar motor switch protein FliN compare
Atu2794 +0.6 2.1 uroporphyrin-III C-methyltransferase compare
Atu0572 +0.6 2.9 hypothetical protein compare
Atu1952 +0.6 1.0 hypothetical protein compare
Atu0152 +0.6 2.3 hypothetical protein compare
Atu0524 +0.6 3.2 transcriptional regulator, LuxR family compare
Atu1184 +0.6 2.3 hypothetical protein compare
Atu4896 +0.6 1.2 acetyltransferase compare
Atu0846 +0.6 2.5 transcriptional regulator, MarR family compare
Atu0795 +0.5 1.8 hypothetical protein compare
Atu1847 +0.5 1.4 hypothetical protein compare
Atu0552 +0.5 4.1 flagellar basal-body rod protein compare
Atu2380 +0.5 1.8 hypothetical protein compare
Atu2135 +0.5 2.4 transcriptional regulator, TetR family compare
Atu0630 +0.5 1.5 hypothetical protein compare
Atu4894 +0.5 2.6 transposase compare
Atu2041 +0.5 1.6 acetyltransferase compare
Atu1483 +0.5 1.6 cytochrome b561 compare
Atu0569 +0.5 3.6 flagellar motor protein, PAL/OmpA family compare
Atu0583 +0.5 3.1 hypothetical protein compare
Atu0938 +0.5 2.1 transcriptional regulator, MerR family compare
Atu0555 +0.5 3.8 flagellar basal-body rod protein FlgB compare
Atu0135 +0.5 1.4 uracil phosphoribosyltransferase compare
Atu3006 +0.5 1.4 hypothetical protein compare
Atu1177 +0.5 2.2 hypothetical protein compare
Atu0836 +0.4 1.6 Glutathione-S-transferase compare
Atu2788 +0.4 2.3 citrate lyase, beta subunit compare
Atu0985 +0.4 2.6 permease compare
Atu0546 +0.4 3.1 flagellar biosynthetic protein compare
Atu0558 +0.4 3.0 flagellar basal body rod protein compare
Atu4890 +0.4 1.0 IS426 transposase compare
Atu3598 +0.4 1.2 thiol:disulfide interchange protein compare
Atu2025 +0.4 1.8 transcriptional regulator compare
Atu0063 +0.4 2.1 ABC transporter, substrate binding protein (sugar) compare
Atu0559 +0.4 3.4 hypothetical protein compare
Atu8181 +0.4 2.0 hypothetical protein compare
Atu8162 +0.4 1.0 hypothetical protein compare
Atu1466 +0.4 1.0 hypothetical protein compare
Atu1052 +0.4 1.8 hypothetical protein compare
Atu2344 +0.4 1.4 lactoylglutathione lyase compare
Atu2407 +0.4 1.5 urease gamma subunit compare
Atu0386 +0.4 1.1 hypothetical protein compare
Atu2220 +0.4 2.8 hypothetical protein compare
Atu0772 +0.4 2.0 hypothetical protein compare
Atu0582 +0.4 3.1 flagellar biosynthetic protein FLIR compare
Atu1760 +0.4 0.8 hypothetical protein compare
Atu3468 +0.4 0.4 hypothetical protein compare
Atu1812 +0.4 1.7 hypothetical protein compare
Atu2433 +0.4 0.7 hypothetical protein compare
Atu0124 +0.4 1.6 hypothetical protein compare
Atu3071 +0.4 1.9 hypothetical protein compare
Atu1321 +0.4 2.0 hypothetical protein compare
Atu8023 +0.4 1.2 hypothetical protein compare
Atu2164 +0.4 1.7 hypothetical protein compare
Atu0557 +0.4 2.9 flagellum-specific ATP synthase compare
Atu1742 +0.4 2.1 hypothetical protein compare
Atu0662 +0.4 2.2 transcriptional regulator, GntR family compare
Atu4884 +0.4 1.1 hypothetical protein compare
Atu2464 +0.4 1.3 formyltetrahydrofolate deformylase compare
Atu1756 +0.4 1.9 hypothetical protein compare
Atu0551 +0.4 1.5 flagellar protein FLGA precursor compare
Atu0561 +0.4 2.7 flagellar motor switch protein compare
Atu8019 +0.4 1.8 hypothetical protein compare
Atu3678 +0.4 1.5 siderophore biosynthesis protein compare
Atu4266 +0.4 2.6 GntR family transcriptional regulator compare
Atu0579 +0.4 2.3 hook formation protein compare
Atu1223 +0.4 0.5 hypothetical protein compare
Atu2391 +0.4 2.5 ABC transporter, substrate binding protein (nitrate/sulfonate/taurine/bicarbonate) compare
Atu1098 +0.4 1.9 hypothetical protein compare
Atu8143 +0.4 1.6 hypothetical protein compare
Atu2282 +0.4 1.7 thymidine kinase compare
Atu0779 +0.4 2.4 peroxiredoxin compare
Atu5471 +0.4 1.3 hypothetical protein compare
Atu0471 +0.4 1.3 hypothetical protein compare
Atu0540 +0.4 1.7 hypothetical protein compare
Atu2159 +0.4 1.7 outer membrane protein compare
Atu0523 +0.4 2.9 flagellar M-ring protein compare
Atu3067 +0.3 2.3 hypothetical protein compare
Atu3182 +0.3 1.3 hypothetical protein compare
Atu1160 +0.3 1.4 hypothetical protein compare
Atu0548 +0.3 2.6 flagellar L-ring protein precursor compare
Atu1349 +0.3 2.1 hypothetical protein compare
Atu3387 +0.3 1.3 sigma factor compare
Atu1868 +0.3 2.0 tRNA/rRNA methyltransferase compare
Atu0550 +0.3 2.7 flagellar P-ring protein precursor compare
Atu2388 +0.3 1.5 ABC transporter, nucleotide binding/ATPase protein (nitrate) compare
Atu2694 +0.3 1.1 hypothetical protein compare
Atu5169 +0.3 1.7 type IV secretion protein AvhB8 compare
Atu2677 +0.3 1.3 protein tyrosine phosphatase compare
Atu0470 +0.3 1.0 hypothetical protein compare
Atu4516 +0.3 1.8 branched chain amino acid ABC transporter ATPase compare
Atu1243 +0.3 1.9 streptomycin resistance protein compare
Atu2722 +0.3 1.9 porin compare
Atu5513 +0.3 0.8 cold shock protein compare
Atu8018 +0.3 0.5 hypothetical protein compare
Atu2827 +0.3 1.5 hypothetical protein compare
Atu0581 +0.3 2.7 flagellar biosynthesis protein compare
Atu1503 +0.3 0.5 hypothetical protein compare
Atu1830 +0.3 1.0 bacterioferritin comigratory protein compare
Atu0570 +0.3 2.7 Chemotaxis protein compare
Atu0547 +0.3 2.2 flagellar protein compare
Atu2032 +0.3 2.1 aldo/keto reductase compare
Atu0115 +0.3 0.5 hypothetical protein compare
Atu5112 +0.3 2.1 hypothetical protein compare
Atu8132 +0.3 2.3 hypothetical protein compare
Atu4540 +0.3 1.2 protocatechuate 3,4-dioxygenase subunit beta compare
Atu3068 +0.3 2.4 ribokinase compare
Atu1082 +0.3 1.7 branched-chain amino acid permease compare
Atu0564 +0.3 2.3 flagellar biosynthetic protein compare
Atu4345 +0.3 1.5 hypothetical protein compare
Atu0492 +0.3 1.8 hypothetical protein compare
Atu2491 +0.3 1.1 hypothetical protein compare
Atu4607 +0.3 1.8 sugar acetylase compare
Atu8055 +0.3 1.2 hypothetical protein compare
Atu1702 +0.3 1.6 stationary-phase survival protein compare
Atu1994 +0.3 1.3 acyl-CoA hydrolase compare
Atu0744 +0.3 0.7 hypothetical protein compare
Atu0912 +0.3 0.7 Na+/H+ antiporter compare
Atu1570 +0.3 0.4 hypothetical protein compare
Atu0253 +0.3 2.3 hypothetical protein compare
Atu1692 +0.3 1.3 hypothetical protein compare
Atu8168 +0.3 1.3 hypothetical protein compare
Atu0732 +0.3 2.2 acyl-CoA dehydrogenase compare
Atu8089 +0.3 1.8 hypothetical protein compare
Atu3034 +0.3 1.7 ROK family transcriptional regulator compare
Atu1694 +0.3 0.7 hypothetical protein compare
Atu0553 +0.3 1.3 flagellar hook-basal body complex protein compare
Atu2184 +0.3 2.0 transcriptional regulator, AsnC family compare
Atu1451 +0.3 1.6 GTP-binding protein HFLX compare
Atu3080 +0.3 2.4 hypothetical protein compare
Atu2457 +0.3 1.3 hypothetical protein compare
Atu1888 +0.3 2.2 two component sensor kinase compare
Atu4168 +0.3 2.0 hypothetical protein compare
Atu4606 +0.3 2.1 hypothetical protein compare
Atu4671 +0.3 1.0 response regulator compare
Atu0595 +0.3 2.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu8161 +0.3 0.7 hypothetical protein compare
Atu0834 +0.3 2.1 hypothetical protein compare
Atu1495 +0.3 1.2 hypothetical protein compare
Atu8156 +0.3 1.5 hypothetical protein compare
Atu0525 +0.3 1.1 transcriptional regulator, LuxR family compare
Atu1333 +0.3 0.8 outer membrane protein compare
Atu2381 +0.3 1.3 hypothetical protein compare
Atu3193 +0.3 1.3 MarR family transcriptional regulator compare
Atu4315 +0.3 1.9 formyltetrahydrofolate deformylase compare
Atu1529 +0.3 1.4 nitrogen fixation protein FixH compare
Atu1782 +0.3 1.0 hypothetical protein compare
Atu0869 +0.3 1.7 hypothetical protein compare
Atu1641 +0.3 2.0 hypothetical protein compare
Atu0549 +0.3 1.6 hypothetical protein compare
Atu0284 +0.3 1.8 tryptophan-rich sensory protein compare
Atu0262 +0.3 1.5 acetyltransferase compare
Atu3926 +0.3 1.1 translation initiation inhibitor compare
Atu1858 +0.3 1.1 hypothetical protein compare
Atu1302 +0.3 0.9 hypothetical protein compare
Atu0212 +0.3 1.6 hypothetical protein compare
Atu1691 +0.3 1.9 GGDEF family protein compare
Atu2603 +0.3 1.6 ABC transporter, membrane spanning protein (maltose) compare
Atu1058 +0.3 1.7 hypothetical protein compare
Atu1835 +0.3 0.6 hypothetical protein compare
Atu1553 +0.3 1.8 hypothetical protein compare
Atu1568 +0.3 1.3 transcriptional regulator, TetR family compare
Atu1501 +0.3 1.5 hypothetical protein compare
Atu3327 +0.3 0.8 succinoglycan exopolysaccharide synthesis protein compare
Atu4004 +0.3 1.8 LysR family transcriptional regulator compare
Atu0050 +0.3 1.6 two component response regulator compare
Atu4132 +0.3 1.3 AraC family transcriptional regulator compare
Atu2208 +0.3 1.0 secretion chaperone compare
Atu0840 +0.3 2.1 ATP-dependent DNA ligase compare
Atu1418 +0.3 1.7 methylenetetrahydrofolate reductase compare
Atu0560 +0.3 2.0 flagellar motor protein compare
Atu1401 +0.3 1.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu0693 +0.3 2.1 PmbA/TldD related protein compare
Atu1731 +0.3 1.4 xanthine-guanine phosphoribosyltransferase compare
Atu0554 +0.3 1.6 flagellar basal-body rod protein compare
Atu2104 +0.3 1.7 hypothetical protein compare
Atu1494 +0.3 1.2 metal dependent hydrolase compare
Atu0317 +0.3 1.5 hypothetical protein compare
Atu1752 +0.3 1.6 hypothetical protein compare
Atu1762 +0.3 1.8 hypothetical protein compare
Atu3809 +0.3 1.8 oxidoreductase compare
Atu4659 +0.3 1.5 AraC family transcriptional regulator compare
Atu2475 +0.3 1.5 ABC transporter, membrane spanning protein compare
Atu0303 +0.3 1.1 hypothetical protein compare
Atu0563 +0.3 1.9 flagellar motor switch protein FliG compare
Atu0738 +0.3 2.1 chemotaxis methyl-accepting protein compare
Atu0545 +0.3 1.6 flagella associated protein compare


Specific Phenotypes

For 13 genes in this experiment

For carbon source Lactulose in Agrobacterium fabrum C58

For carbon source Lactulose across organisms