Experiment set10IT015 for Agrobacterium fabrum C58

Compare to:

D-(+)-Turanose carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu1354 +1.0 1.8 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu3468 +0.9 1.2 hypothetical protein compare
Atu3001 +0.9 1.8 hypothetical protein compare
Atu0135 +0.9 1.3 uracil phosphoribosyltransferase compare
Atu1241 +0.8 2.8 hypothetical protein compare
Atu3121 +0.8 1.6 cold shock protein compare
Atu3730 +0.7 0.9 hypothetical protein compare
Atu4677 +0.7 1.2 hypothetical protein compare
Atu4540 +0.7 2.3 protocatechuate 3,4-dioxygenase subunit beta compare
Atu0280 +0.7 1.9 hypothetical protein compare
Atu0791 +0.7 3.9 transcriptional regulator, GntR family compare
Atu3603 +0.7 1.7 two component response regulator compare
Atu0976 +0.7 1.3 cycL protein compare
Atu1026 +0.6 1.6 hypothetical protein compare
Atu4896 +0.6 1.2 acetyltransferase compare
Atu1387 +0.6 3.0 transcriptional regulator, GntR family compare
Atu0640 +0.6 2.0 hypothetical protein compare
Atu0544 +0.6 0.9 hypothetical protein compare
Atu2200 +0.6 2.0 cold shock protein compare
Atu4061 +0.5 2.6 exopolysaccharide production repressor protein compare
Atu1483 +0.5 2.3 cytochrome b561 compare
Atu1818 +0.5 1.0 hypothetical protein compare
Atu0573 +0.5 3.9 transcriptional regulator compare
Atu0553 +0.5 2.7 flagellar hook-basal body complex protein compare
Atu0580 +0.5 1.7 flagellar biosynthetic protein compare
Atu0375 +0.5 1.9 small heat shock protein compare
Atu2620 +0.5 1.1 hypothetical protein compare
Atu3647 +0.5 1.4 hypothetical protein compare
Atu3461 +0.5 1.5 GntR family transcriptional regulator compare
Atu3036 +0.4 2.3 dipeptide ABC transporter permease compare
Atu2464 +0.4 1.4 formyltetrahydrofolate deformylase compare
Atu2204 +0.4 1.6 hypothetical protein compare
Atu3193 +0.4 2.9 MarR family transcriptional regulator compare
Atu3182 +0.4 1.8 hypothetical protein compare
Atu1160 +0.4 1.4 hypothetical protein compare
Atu1333 +0.4 1.5 outer membrane protein compare
Atu0997 +0.4 2.1 hypothetical protein compare
Atu2450 +0.4 1.6 hypothetical protein compare
Atu0750 +0.4 3.4 ABC transporter, membrane spanning protein compare
Atu5034 +0.4 1.4 hypothetical protein compare
Atu8176 +0.4 1.2 hypothetical protein compare
Atu0585 +0.4 1.9 hypothetical protein compare
Atu2166 +0.4 2.1 hypothetical protein compare
Atu1994 +0.4 1.6 acyl-CoA hydrolase compare
Atu1847 +0.4 1.1 hypothetical protein compare
Atu0303 +0.4 1.5 hypothetical protein compare
Atu3071 +0.4 1.8 hypothetical protein compare
Atu1232 +0.4 0.8 hypothetical protein compare
Atu2273 +0.4 1.8 hypothetical protein compare
Atu0772 +0.4 2.1 hypothetical protein compare
Atu0279 +0.4 1.9 transcriptional regulator, TetR family compare
Atu5161 +0.4 2.3 hypothetical protein compare
Atu3704 +0.4 2.6 hypothetical protein compare
Atu1005 +0.4 1.6 hypothetical protein compare
Atu0234 +0.4 2.2 conserved hypothetical protein, membrane protein compare
Atu1573 +0.4 0.8 hypothetical protein compare
Atu1184 +0.4 1.4 hypothetical protein compare
Atu3653 +0.4 2.1 hypothetical protein compare
Atu1349 +0.4 2.1 hypothetical protein compare
Atu8185 +0.4 1.2 hypothetical protein compare
Atu1287 +0.4 1.3 hypothetical protein compare
Atu2159 +0.4 1.7 outer membrane protein compare
Atu4124 +0.4 2.1 branched chain amino acid ABC transporter ATPase compare
Atu4894 +0.4 1.9 transposase compare
Atu3006 +0.4 1.4 hypothetical protein compare
Atu5163 +0.4 1.6 type IV secretion protein AvhB2 compare
Atu0142 +0.4 0.9 cytochrome o ubiquinol oxidase subunit II compare
Atu4435 +0.4 1.7 oligopeptide ABC transporter ATPase compare
Atu0558 +0.3 2.3 flagellar basal body rod protein compare
Atu3044 +0.3 1.3 asparaginase compare
Atu0802 +0.3 2.4 hypothetical protein compare
Atu3926 +0.3 1.2 translation initiation inhibitor compare
Atu1896 +0.3 1.2 hypothetical protein compare
Atu3159 +0.3 1.9 3-hydroxyisobutyrate dehydrogenase compare
Atu1214 +0.3 2.3 DNA-binding protein compare
Atu0559 +0.3 1.7 hypothetical protein compare
Atu1676 +0.3 2.0 para-aminobenzoate synthase component I compare
Atu3012 +0.3 0.5 hypothetical protein compare
Atu0063 +0.3 1.8 ABC transporter, substrate binding protein (sugar) compare
Atu2457 +0.3 1.6 hypothetical protein compare
Atu2462 +0.3 1.2 hypothetical protein compare
Atu3506 +0.3 1.4 hypothetical protein compare
Atu4753 +0.3 1.2 amino acid ABC transporter permease compare
Atu5152 +0.3 1.8 hypothetical protein compare
Atu1461 +0.3 1.8 hypothetical protein compare
Atu1558 +0.3 1.1 permease compare
Atu6158 +0.3 1.6 conserved hypothetical protein compare
Atu6160 +0.3 1.7 conserved hypothetical protein compare
Atu2676 +0.3 1.1 4a-hydroxytetrahydrobiopterin dehydratase compare
Atu3100 +0.3 1.6 sugar ABC transporter permease compare
Atu8019 +0.3 1.3 hypothetical protein compare
Atu0773 +0.3 1.4 surfeit 1 compare
Atu1888 +0.3 2.4 two component sensor kinase compare
Atu3267 +0.3 1.2 dipeptide ABC transporter permease compare
Atu4202 +0.3 1.8 methyltransferase compare
Atu0765 +0.3 1.7 TldD compare
Atu3864 +0.3 1.3 hypothetical protein compare
Atu8158 +0.3 1.0 hypothetical protein compare
Atu8191 +0.3 0.8 hypothetical protein compare
Atu1830 +0.3 1.1 bacterioferritin comigratory protein compare
Atu2335 +0.3 0.7 hypothetical protein compare
Atu5057 +0.3 0.8 hypothetical protein compare
Atu0547 +0.3 2.2 flagellar protein compare
Atu2772 +0.3 1.2 Invasion protein A compare
Atu4267 +0.3 1.3 hypothetical protein compare
Atu2484 +0.3 0.7 hypothetical protein compare
Atu1098 +0.3 1.8 hypothetical protein compare
Atu1476 +0.3 1.5 esterase D compare
Atu1887 +0.3 1.7 succinoglycan biosynthesis protein compare
Atu5106 +0.3 1.6 DNA binding protein compare
Atu0268 +0.3 1.1 hypothetical protein compare
Atu2164 +0.3 1.1 hypothetical protein compare
Atu4035 +0.3 2.1 two component response regulator compare
Atu1494 +0.3 1.7 metal dependent hydrolase compare
Atu8124 +0.3 1.7 hypothetical protein compare
Atu3427 +0.3 1.4 hypothetical protein compare
Atu1317 +0.3 1.5 metal dependent hydrolase compare
Atu4398 +0.3 1.7 hypothetical protein compare
Atu3052 +0.3 1.4 MarR family transcriptional regulator compare
Atu2592 +0.3 1.4 hypothetical protein compare
Atu5166 +0.3 1.6 type IV secretion protein AvhB5 compare
Atu5186 +0.3 1.1 hypothetical protein compare
Atu3632 +0.3 1.4 hypothetical protein compare
Atu0557 +0.3 2.3 flagellum-specific ATP synthase compare
Atu2567 +0.3 1.3 thiamin biosynthesis protein ThiG compare
Atu1989 +0.3 1.3 two component response regulator compare
Atu2025 +0.3 1.3 transcriptional regulator compare
Atu0523 +0.3 2.3 flagellar M-ring protein compare
Atu0751 +0.3 1.2 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu0552 +0.3 1.9 flagellar basal-body rod protein compare
Atu2220 +0.3 1.7 hypothetical protein compare
Atu4606 +0.3 1.7 hypothetical protein compare
Atu4516 +0.3 1.3 branched chain amino acid ABC transporter ATPase compare
Atu3327 +0.3 0.5 succinoglycan exopolysaccharide synthesis protein compare
Atu0604 +0.3 1.3 hypothetical protein compare
Atu1999 +0.3 1.8 hypothetical protein compare
Atu0570 +0.3 2.2 Chemotaxis protein compare
Atu8194 +0.3 1.0 hypothetical protein compare
Atu1692 +0.3 1.3 hypothetical protein compare
Atu3644 +0.3 0.9 hypothetical protein compare
Atu4387 +0.3 1.4 nitric oxide reductase NorQ protein compare
Atu2072 +0.3 1.2 ribosomal protein L11 methyltransferase compare
Atu3651 +0.3 1.8 hypothetical protein compare
Atu4506 +0.3 1.8 hypothetical protein compare
Atu8126 +0.3 1.3 putative phage tail protein I compare
Atu2282 +0.3 1.3 thymidine kinase compare
Atu1338 +0.3 1.5 3-oxoacyl-(acyl carrier protein) reductase compare
Atu5112 +0.3 1.5 hypothetical protein compare
Atu4050 +0.3 0.8 UTP-glucose-1-phosphate uridylyltransferase compare
Atu1812 +0.3 1.3 hypothetical protein compare
Atu2044 +0.3 0.9 HFLC protein compare
Atu1954 +0.3 1.7 hypothetical protein compare
Atu1466 +0.3 0.8 hypothetical protein compare
Atu5549 +0.3 1.6 hypothetical protein compare
Atu0085 +0.3 1.4 tRNA pseudouridine 55 synthase compare
Atu4162 +0.3 1.5 two-component response regulator compare
Atu2571 +0.3 1.6 acyl carrier protein, putative compare
Atu1021 +0.3 0.8 outer membrane protein compare
Atu8163 +0.3 1.1 hypothetical protein compare
Atu4255 +0.3 1.5 hypothetical protein compare
Atu2130 +0.3 1.1 hypothetical protein compare
Atu4260 +0.3 1.9 ABC transporter permease compare
Atu3334 +0.3 1.4 hypothetical protein compare
Atu1662 +0.3 1.6 hypothetical protein compare
Atu1549 +0.3 0.8 hypothetical protein compare
Atu3544 +0.3 1.9 arsenical pump membrane protein compare
Atu6036 +0.3 0.6 entry-exclusion protein compare
Atu2058 +0.3 1.4 hypothetical protein compare
Atu1133 +0.3 1.7 ribonuclease compare
Atu4747 +0.2 1.5 sugar ABC transporter permease compare
Atu3467 +0.2 0.8 hypothetical protein compare
Atu1756 +0.2 1.7 hypothetical protein compare
Atu3911 +0.2 1.7 hypothetical protein compare
Atu2135 +0.2 1.3 transcriptional regulator, TetR family compare
Atu0477 +0.2 0.8 hypothetical protein compare
Atu5130 +0.2 1.0 attachment protein compare
Atu4740 +0.2 1.7 zinc-binding dehydrogenase compare
Atu3657 +0.2 1.1 hypothetical protein compare
Atu0581 +0.2 2.1 flagellar biosynthesis protein compare
Atu4143 +0.2 1.3 hypothetical protein compare
Atu1971 +0.2 0.7 hypothetical protein compare
Atu0555 +0.2 1.7 flagellar basal-body rod protein FlgB compare
Atu4527 +0.2 0.6 hypothetical protein compare
Atu3394 +0.2 0.8 iron ABC transporter ATPase compare
Atu3959 +0.2 1.4 aldehyde dehydrogenase compare
Atu4452 +0.2 1.0 hypothetical protein compare
Atu5455 +0.2 1.0 hypothetical protein compare
Atu2129 +0.2 1.8 hypothetical protein compare
Atu0892 +0.2 1.2 hypothetical protein compare
Atu4706 +0.2 0.8 formate dehydrogenase subunit gamma compare
Atu0562 +0.2 0.8 flagellar motor switch protein FliN compare
Atu0749 +0.2 0.8 biotin synthesis BioY protein compare
Atu2203 +0.2 1.5 hypothetical protein compare
Atu8054 +0.2 0.3 hypothetical protein compare
Atu5428 +0.2 1.8 DNA-damage-inducible protein F compare
Atu5517 +0.2 1.1 hypothetical protein compare
Atu3576 +0.2 1.7 xylose ABC transporter substrate-binding protein compare
Atu1848 +0.2 1.2 transcriptional regulator, GntR family compare
Atu3454 +0.2 1.2 arylesterase compare
Atu4376 +0.2 1.8 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source D-(+)-Turanose in Agrobacterium fabrum C58

For carbon source D-(+)-Turanose across organisms