Experiment set10IT014 for Agrobacterium fabrum C58

Compare to:

D-(+)-Turanose carbon source

200 most important genes:

  gene name fitness t score description  
Atu0099 -7.2 -9.9 prephenate dehydratase compare
Atu0679 -7.2 -4.9 ATP phosphoribosyltransferase compare
Atu0400 -7.0 -4.8 orotate phosphoribosyltransferase compare
Atu1687 -6.8 -10.3 anthranilate phosphoribosyltransferase compare
Atu1140 -6.7 -7.3 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2726 -6.7 -18.9 pyruvate carboxylase compare
Atu1844 -6.7 -4.6 Phosphoribosylformylglycinamidine synthetase compare
Atu2289 -6.7 -14.3 anthranilate synthase component I and II compare
Atu2036 -6.6 -10.1 acetolactate synthase III, large subunit compare
Atu0399 -6.3 -6.2 dihydroorotase compare
Atu0678 -6.2 -4.3 histidyl-tRNA synthetase compare
Atu0537 -6.1 -4.2 histidinol dehydrogenase compare
Atu2264 -6.1 -12.4 2-isopropylmalate synthase compare
Atu3707 -6.1 -4.2 phosphoserine aminotransferase compare
Atu0298 -6.0 -9.2 orotidine 5 compare
Atu0038 -6.0 -5.6 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3783 -6.0 -17.0 glutamate synthase subunit beta compare
Atu2040 -5.9 -5.8 phosphoserine phosphatase compare
Atu2709 -5.9 -19.4 3-isopropylmalate dehydratase, large subunit compare
Atu1205 -5.9 -13.8 threonine dehydratase compare
Atu3706 -5.8 -8.9 D-3-phosphoglycerate dehydrogenase compare
Atu1307 -5.7 -9.7 dihydroorotase compare
Atu2791 -5.7 -10.2 3-isopropylmalate dehydrogenase compare
Atu1845 -5.7 -6.6 phosphoribosylformylglycinamidine synthase I compare
Atu1075 -5.6 -9.4 amidophosphoribosyltransferase compare
Atu1688 -5.6 -7.7 indole-3-glycerol-phosphate synthase compare
Atu1308 -5.5 -7.2 aspartate carbamoyl transferase catalytic subunit compare
Atu1850 -5.5 -4.9 phosphoribosylformylglycinamidine synthetase II compare
Atu1141 -5.5 -10.4 Phosphoribosylglycinamide synthetase compare
Atu0432 -5.4 -9.9 O-succinylhomoserine sulfhydrylase compare
Atu3754 -5.3 -8.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1588 -5.3 -11.3 homoserine dehydrogenase compare
Atu3755 -5.3 -6.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0647 -5.2 -8.0 phosphoribosylamine--glycine ligase compare
Atu3885 -5.2 -9.3 inositol monophosphatase compare
Atu2718 -5.0 -9.6 homoserine O-succinyltransferase compare
Atu0017 -5.0 -4.9 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1359 -4.8 -2.1 dnaK deletion suppressor protein compare
Atu0486 -4.8 -7.7 dihydroorotate dehydrogenase compare
Atu3784 -4.8 -27.8 glutamate synthase large subunit compare
Atu0043 -4.7 -3.3 imidazoleglycerol-phosphate dehydratase compare
Atu0039 -4.7 -3.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu2747 -4.6 -13.5 hypothetical protein compare
Atu0184 -4.6 -5.5 glucokinase compare
Atu3739 -4.6 -4.0 phosphoglycerate kinase compare
Atu3483 -4.6 -7.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu2015 -4.5 -16.8 aminotransferase compare
Atu1686 -4.3 -17.9 peptidyl-prolyl cis-trans isomerse D compare
Atu1750 -4.3 -2.5 phosphoribosyl c-AMP cyclohydrolase compare
Atu2790 -4.2 -3.6 3-isopropylmalate dehydratase, small subunit compare
Atu3469 -4.0 -3.9 phosphoglyceromutase compare
Atu3482 -3.9 -10.0 pantoate--beta-alanine ligase compare
Atu1030 -3.8 -2.7 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0598 -3.6 -7.3 phosphogluconate dehydratase compare
Atu0792 -3.5 -8.5 hypothetical protein compare
Atu1589 -3.5 -6.7 aminotransferase, class I compare
Atu1685 -3.4 -2.1 hypothetical protein compare
Atu0041 -3.4 -4.0 glutamine amidotransferase compare
Atu1446 -3.3 -4.5 two component response regulator compare
Atu2548 -3.2 -16.6 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0040 -3.2 -1.9 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0641 -3.2 -6.2 hypothetical protein compare
Atu2684 -3.1 -4.0 hypothetical protein compare
Atu3731 -2.9 -6.6 5-formyltetrahydrofolate cyclo-ligase compare
Atu2650 -2.7 -15.1 glycerol-3-phosphate dehydrogenase compare
Atu0401 -2.6 -10.7 fructokinase compare
Atu0030 -2.6 -2.7 phosphocarrier protein HPr compare
Atu4217 -2.5 -2.7 TetR family transcriptional regulator compare
Atu4773 -2.5 -3.2 two component response regulator compare
Atu3997 -2.3 -12.8 biotin synthetase compare
Atu4098 -2.2 -13.9 quinolinate synthetase compare
Atu4096 -2.1 -10.9 nicotinate-nucleotide pyrophosphorylase compare
Atu3342 -2.1 -8.2 trehalose utilization-like protein compare
Atu1604 -2.1 -14.5 poly-beta-hydroxybutyrate synthase compare
Atu2155 -2.1 -14.0 methionine synthase compare
Atu2554 -2.0 -3.8 lysyl-tRNA synthetase compare
Atu0029 -2.0 -6.8 S-adenosylhomocysteine hydrolase compare
Atu1620 -2.0 -12.6 triosephosphate isomerase compare
Atu3343 -2.0 -9.3 trehalose utilization-like protein compare
Atu4317 -2.0 -5.4 TetR family transcriptional regulator compare
Atu4075 -1.9 -8.4 glycogen synthase compare
Atu4616 -1.8 -2.9 dTDP-4-dehydrorhamnose reductase compare
Atu4000 -1.8 -11.5 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu3998 -1.8 -11.6 8-amino-7-oxononanoate synthase compare
Atu4097 -1.8 -10.7 L-aspartate oxidase compare
Atu4001 -1.8 -9.6 3-oxoacyl-ACP synthase compare
Atu2127 -1.7 -9.1 L-carnitine dehydratase compare
Atu3486 -1.7 -2.6 DeoR family transcriptional regulator compare
Atu1572 -1.6 -8.5 hydrolase compare
Atu3999 -1.6 -2.2 dithiobiotin synthetase compare
Atu1219 -1.6 -1.0 hypothetical protein compare
Atu3290 -1.6 -10.9 phosphomethylpyrimidine kinase compare
Atu1748 -1.6 -7.6 NIFU-like protein compare
Atu2205 -1.6 -6.3 transcriptional regulator, MarR family compare
Atu1462 -1.5 -10.5 glycine cleavage system protein P2 compare
Atu8115 -1.5 -4.1 Hypothetical Protein compare
Atu1456 -1.5 -8.1 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu2209 -1.5 -4.7 pyrroline-5-carboxylate reductase compare
Atu2207 -1.5 -3.0 two component sensor kinase compare
Atu0876 -1.5 -2.4 superoxide dismutase compare
Atu1463 -1.5 -5.3 glycine cleavage system component H compare
Atu1464 -1.4 -4.8 glycine cleavage system T protein, aminomethyltransferase compare
Atu3763 -1.4 -1.8 hypothetical protein compare
Atu0422 -1.4 -1.5 ABC transporter, membrane spanning protein compare
Atu0886 -1.4 -1.5 hypothetical protein compare
Atu0185 -1.4 -2.6 methylglyoxal synthase compare
Atu3908 -1.3 -8.5 GntR family transcriptional regulator compare
Atu1254 -1.3 -2.4 transcriptional regulator, ArsR family compare
Atu3288 -1.3 -6.1 hydroxyethylthiazole kinase compare
Atu4541 -1.3 -3.1 carboxymuconolactone decarboxylase compare
Atu0434 -1.3 -1.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2569 -1.3 -8.2 thiamine biosynthesis protein compare
Atu1810 -1.3 -1.1 hypothetical protein compare
Atu3338 -1.2 -8.4 trehalose/maltose ABC transporter substrate-binding protein compare
Atu1454 -1.2 -5.7 siroheme synthase compare
Atu0031 -1.2 -1.6 PTS system, IIA component compare
Atu4711 -1.2 -4.4 two component sensor kinase compare
Atu3339 -1.2 -7.8 trehalose/maltose ABC transporter permease compare
Atu1542 -1.2 -6.0 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2793 -1.2 -5.1 cobyrinic acid a,c-diamide synthase compare
Atu1891 -1.2 -3.2 cobalamin biosynthesis protein compare
Atu2796 -1.2 -4.8 precorrin-4 C11-methyltransferase compare
Atu2801 -1.2 -3.1 precorrin-2 C20 methyltransferase compare
Atu3712 -1.1 -1.6 hypothetical protein compare
Atu2805 -1.1 -4.8 cobalamin synthesis protein compare
Atu4613 -1.1 -8.4 glycosyltransferase compare
Atu2808 -1.1 -4.7 cobyric acid synthase compare
Atu0332 -1.1 -6.0 RNA polymerase sigma-54 factor compare
Atu3341 -1.1 -6.4 trehalose/maltose ABC transporter ATPase compare
Atu0189 -1.1 -3.0 ABC transporter, membrane spanning protein (peptide) compare
Atu2020 -1.1 -3.0 transcriptional regulator, TetR family compare
Atu2821 -1.1 -4.3 transcriptional regulator, GntR family compare
Atu2798 -1.0 -3.7 precorrin-6y methyltransferase compare
Atu4792 -1.0 -1.7 hypothetical protein compare
Atu0894 -1.0 -2.0 ABC transporter, membrane spanning protein compare
Atu2770 -1.0 -4.0 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu3017 -1.0 -1.4 phosphoglyceromutase compare
Atu3461 -1.0 -1.7 GntR family transcriptional regulator compare
Atu2286 -1.0 -1.6 hypothetical protein compare
Atu2803 -1.0 -2.8 Cobalamin biosynthesis associated protein compare
Atu2795 -1.0 -4.8 cobalamin biosynthetic protein compare
Atu3750 -1.0 -2.3 thiamine-phosphate pyrophosphorylase compare
Atu0086 -0.9 -0.6 ribosome-binding factor A compare
Atu2028 -0.9 -2.8 transcriptional regulator, ArsR family compare
Atu0331 -0.9 -2.5 sigma-54 modulation protein compare
Atu2809 -0.9 -6.0 cobalamin biosynthesis protein compare
Atu2802 -0.9 -3.5 precorrin-8X methylmutase compare
Atu1455 -0.9 -4.2 hypothetical protein compare
Atu2807 -0.9 -4.1 cob(I)alamin adenosyltransferase compare
Atu2379 -0.9 -6.0 phosphomannomutase compare
Atu2814 -0.9 -3.6 zinc-binding dehydrogenase compare
Atu4618 -0.9 -5.8 dTDP-rhamnose-3,5-epimerase compare
Atu3289 -0.9 -2.3 thiamine-phosphate pyrophosphorylase compare
Atu3340 -0.9 -4.9 trehalose/maltose ABC transporter permease compare
Atu1076 -0.8 -2.9 colicin V production protein compare
Atu8012 -0.8 -1.8 hypothetical protein compare
Atu2799 -0.8 -3.2 precorrin-6x reductase compare
Atu2804 -0.8 -5.3 cobaltochelatase subunit compare
Atu2692 -0.8 -2.8 intracellular septation protein compare
Atu1904 -0.8 -2.2 transcriptional regulator compare
Atu5115 -0.8 -1.7 hypothetical protein compare
Atu1447 -0.8 -2.4 two component sensor kinase compare
Atu2740 -0.8 -4.0 transcriptional regulator, GntR family compare
Atu3485 -0.8 -4.0 short chain dehydrogenase compare
Atu1570 -0.8 -0.9 hypothetical protein compare
Atu1028 -0.8 -2.0 hypothetical protein compare
Atu8087 -0.8 -0.9 putative peptidoglycan binding protein compare
Atu0677 -0.8 -2.3 hypothetical protein compare
Atu4072 -0.8 -1.4 nodulation protein N compare
Atu3663 -0.8 -1.5 hypothetical protein compare
Atu0361 -0.8 -2.1 transcriptional regulator compare
Atu1779 -0.8 -1.9 hypothetical protein compare
Atu4617 -0.8 -5.1 dTDP-D-glucose-4,6-dehydratase compare
Atu4615 -0.8 -4.5 glucose-1-phosphate thymidylyltransferase compare
Atu1679 -0.8 -2.2 peptidyl prolyl cis-trans isomerase compare
Atu5142 -0.8 -1.3 hypothetical protein compare
Atu2376 -0.8 -0.6 hypothetical protein compare
Atu2183 -0.8 -4.2 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu1225 -0.7 -1.3 hypothetical protein compare
Atu0025 -0.7 -1.9 hypothetical protein compare
Atu0837 -0.7 -2.8 transcriptional regulator, MarR family compare
Atu0981 -0.7 -5.3 glutamate-ammonia-ligase adenylyltransferase compare
Atu4166 -0.7 -1.8 UDP-glucose 4-epimerase compare
Atu0842 -0.7 -1.5 hypothetical protein compare
Atu2578 -0.7 -3.9 cAMP-dependent protein kinase regulatory subunit compare
Atu1774 -0.7 -3.2 ABC transporter, substrate binding protein (peptide) compare
Atu2662 -0.7 -1.2 acetyltransferase compare
Atu4068 -0.7 -2.4 sarcosine oxidase delta subunit compare
Atu0784 -0.7 -2.7 hypothetical protein compare
Atu5125 -0.7 -3.1 GntR family transcriptional regulator compare
Atu3413 -0.7 -2.2 AsnC family transcriptional regulator compare
Atu1457 -0.7 -1.6 hypothetical protein compare
Atu1503 -0.7 -0.9 hypothetical protein compare
Atu2746 -0.7 -1.6 hypothetical protein compare
Atu1629 -0.7 -1.1 transcriptional regulator, ArsR family compare
Atu4873 -0.7 -3.7 TetR family transcriptional regulator compare
Atu3311 -0.7 -5.5 phosphomannose isomerase compare
Atu3353 -0.7 -4.9 mannose-1-phosphate guanylyltransferase compare
Atu1364 -0.7 -3.5 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0354 -0.7 -1.4 ferric uptake regulator compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source D-(+)-Turanose in Agrobacterium fabrum C58

For carbon source D-(+)-Turanose across organisms