Experiment set10IT013 for Agrobacterium fabrum C58

Compare to:

Maltitol carbon source

200 most important genes:

  gene name fitness t score description  
Atu0679 -7.2 -5.0 ATP phosphoribosyltransferase compare
Atu2791 -7.0 -8.3 3-isopropylmalate dehydrogenase compare
Atu0099 -6.7 -12.0 prephenate dehydratase compare
Atu1687 -6.6 -10.0 anthranilate phosphoribosyltransferase compare
Atu1205 -6.5 -13.2 threonine dehydratase compare
Atu3706 -6.4 -7.6 D-3-phosphoglycerate dehydrogenase compare
Atu1750 -6.3 -5.7 phosphoribosyl c-AMP cyclohydrolase compare
Atu2718 -6.3 -8.7 homoserine O-succinyltransferase compare
Atu3707 -6.2 -4.3 phosphoserine aminotransferase compare
Atu2726 -6.1 -24.2 pyruvate carboxylase compare
Atu1307 -6.1 -9.4 dihydroorotase compare
Atu2289 -6.0 -20.4 anthranilate synthase component I and II compare
Atu0017 -6.0 -4.1 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2036 -5.8 -14.5 acetolactate synthase III, large subunit compare
Atu0537 -5.8 -6.8 histidinol dehydrogenase compare
Atu1845 -5.7 -6.8 phosphoribosylformylglycinamidine synthase I compare
Atu0486 -5.7 -8.5 dihydroorotate dehydrogenase compare
Atu0432 -5.6 -9.0 O-succinylhomoserine sulfhydrylase compare
Atu2264 -5.6 -15.4 2-isopropylmalate synthase compare
Atu3885 -5.5 -9.2 inositol monophosphatase compare
Atu0678 -5.5 -6.6 histidyl-tRNA synthetase compare
Atu2709 -5.5 -18.1 3-isopropylmalate dehydratase, large subunit compare
Atu0298 -5.4 -11.5 orotidine 5 compare
Atu3754 -5.4 -8.9 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1688 -5.2 -9.4 indole-3-glycerol-phosphate synthase compare
Atu0041 -5.2 -3.6 glutamine amidotransferase compare
Atu2790 -5.0 -2.9 3-isopropylmalate dehydratase, small subunit compare
Atu1844 -4.9 -5.5 Phosphoribosylformylglycinamidine synthetase compare
Atu0039 -4.9 -3.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu1140 -4.9 -6.5 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1588 -4.9 -12.2 homoserine dehydrogenase compare
Atu1141 -4.8 -9.2 Phosphoribosylglycinamide synthetase compare
Atu0399 -4.7 -9.2 dihydroorotase compare
Atu3342 -4.6 -8.2 trehalose utilization-like protein compare
Atu2040 -4.5 -6.9 phosphoserine phosphatase compare
Atu0400 -4.5 -8.0 orotate phosphoribosyltransferase compare
Atu1075 -4.5 -10.7 amidophosphoribosyltransferase compare
Atu1308 -4.4 -9.4 aspartate carbamoyl transferase catalytic subunit compare
Atu0038 -4.4 -5.7 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3739 -4.3 -2.9 phosphoglycerate kinase compare
Atu3343 -3.9 -9.6 trehalose utilization-like protein conserved
Atu3783 -3.8 -16.4 glutamate synthase subunit beta compare
Atu1446 -3.8 -5.0 two component response regulator compare
Atu0043 -3.7 -4.1 imidazoleglycerol-phosphate dehydratase compare
Atu1850 -3.7 -6.1 phosphoribosylformylglycinamidine synthetase II compare
Atu0184 -3.6 -5.1 glucokinase compare
Atu0647 -3.6 -9.6 phosphoribosylamine--glycine ligase compare
Atu3755 -3.6 -6.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu3763 -3.4 -2.3 hypothetical protein compare
Atu3482 -3.3 -7.3 pantoate--beta-alanine ligase compare
Atu3784 -3.2 -23.1 glutamate synthase large subunit compare
Atu2015 -3.1 -13.4 aminotransferase compare
Atu3483 -3.1 -7.2 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu2650 -3.0 -16.9 glycerol-3-phosphate dehydrogenase compare
Atu0641 -2.8 -6.5 hypothetical protein compare
Atu0769 -2.8 -2.5 protoheme IX farnesyltransferase compare
Atu1686 -2.7 -17.1 peptidyl-prolyl cis-trans isomerse D compare
Atu0040 -2.7 -2.3 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0876 -2.6 -4.2 superoxide dismutase compare
Atu0346 -2.6 -4.2 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3469 -2.5 -3.7 phosphoglyceromutase compare
Atu1589 -2.4 -5.8 aminotransferase, class I compare
Atu0792 -2.4 -9.9 hypothetical protein compare
Atu0401 -2.3 -7.1 fructokinase compare
Atu1327 -2.3 -5.7 NADH-ubiquinone oxidoreductase compare
Atu2548 -2.2 -12.9 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0434 -2.0 -3.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4096 -2.0 -9.7 nicotinate-nucleotide pyrophosphorylase compare
Atu3731 -2.0 -10.2 5-formyltetrahydrofolate cyclo-ligase compare
Atu4098 -2.0 -13.2 quinolinate synthetase compare
Atu2209 -2.0 -4.9 pyrroline-5-carboxylate reductase compare
Atu1030 -1.9 -1.9 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0598 -1.8 -7.9 phosphogluconate dehydratase compare
Atu1163 -1.8 -3.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1445 -1.8 -7.8 two component sensor kinase compare
Atu4097 -1.8 -11.3 L-aspartate oxidase compare
Atu1359 -1.7 -1.7 dnaK deletion suppressor protein compare
Atu0185 -1.5 -2.2 methylglyoxal synthase compare
Atu4166 -1.5 -2.1 UDP-glucose 4-epimerase compare
Atu1748 -1.5 -8.6 NIFU-like protein compare
Atu1685 -1.5 -1.6 hypothetical protein compare
Atu2155 -1.4 -11.3 methionine synthase compare
Atu4318 -1.4 -6.9 xylitol dehydrogenase compare
Atu3339 -1.4 -5.4 trehalose/maltose ABC transporter permease conserved
Atu0590 -1.4 -6.7 transcriptional regulator repressor compare
Atu2067 -1.3 -1.3 hypothetical protein compare
Atu4075 -1.3 -5.6 glycogen synthase compare
Atu2125 -1.3 -2.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu3338 -1.3 -8.2 trehalose/maltose ABC transporter substrate-binding protein conserved
Atu0029 -1.3 -5.8 S-adenosylhomocysteine hydrolase compare
Atu1028 -1.2 -3.4 hypothetical protein compare
Atu1456 -1.2 -8.1 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu3340 -1.2 -6.5 trehalose/maltose ABC transporter permease conserved
Atu2379 -1.2 -7.5 phosphomannomutase compare
Atu3341 -1.1 -5.6 trehalose/maltose ABC transporter ATPase conserved
Atu1454 -1.1 -5.3 siroheme synthase compare
Atu2205 -1.1 -5.2 transcriptional regulator, MarR family compare
Atu2207 -1.1 -4.0 two component sensor kinase compare
Atu0031 -1.1 -1.6 PTS system, IIA component compare
Atu4616 -1.1 -2.1 dTDP-4-dehydrorhamnose reductase compare
Atu3486 -1.1 -1.7 DeoR family transcriptional regulator compare
Atu4541 -1.1 -3.0 carboxymuconolactone decarboxylase compare
Atu4615 -1.1 -6.2 glucose-1-phosphate thymidylyltransferase compare
Atu4613 -1.1 -7.5 glycosyltransferase compare
Atu1219 -1.1 -1.5 hypothetical protein compare
Atu4317 -1.1 -4.3 TetR family transcriptional regulator compare
Atu2747 -1.1 -8.1 hypothetical protein compare
Atu1620 -1.0 -7.3 triosephosphate isomerase compare
Atu2682 -1.0 -2.1 hypothetical protein compare
Atu1462 -1.0 -6.5 glycine cleavage system protein P2 compare
Atu4609 -1.0 -7.0 glycosyltransferase compare
Atu3997 -1.0 -6.9 biotin synthetase compare
Atu6114 -1.0 -1.8 hypothetical protein compare
Atu0422 -1.0 -2.7 ABC transporter, membrane spanning protein compare
Atu0030 -0.9 -1.7 phosphocarrier protein HPr compare
Atu4711 -0.9 -3.9 two component sensor kinase compare
Atu2692 -0.9 -2.8 intracellular septation protein compare
Atu1572 -0.9 -5.3 hydrolase compare
Atu1457 -0.9 -2.1 hypothetical protein compare
Atu4608 -0.9 -6.4 hypothetical protein compare
Atu2017 -0.9 -1.3 hypothetical protein compare
Atu1604 -0.9 -6.2 poly-beta-hydroxybutyrate synthase compare
Atu0837 -0.9 -2.8 transcriptional regulator, MarR family compare
Atu0103 -0.9 -6.6 penicillin-binding protein compare
Atu8115 -0.9 -3.6 Hypothetical Protein compare
Atu4217 -0.9 -1.3 TetR family transcriptional regulator compare
Atu3311 -0.9 -7.4 phosphomannose isomerase compare
Atu4610 -0.9 -5.2 sugar nucleotide epimerase/dehydratase compare
Atu3712 -0.8 -1.5 hypothetical protein compare
Atu3998 -0.8 -6.1 8-amino-7-oxononanoate synthase compare
Atu1464 -0.8 -4.3 glycine cleavage system T protein, aminomethyltransferase compare
Atu4000 -0.8 -6.4 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu3083 -0.8 -3.0 hypothetical protein compare
Atu0188 -0.8 -2.0 ABC transporter, membrane spanning protein (peptide) compare
Atu2787 -0.8 -1.0 hypothetical protein compare
Atu2028 -0.8 -2.6 transcriptional regulator, ArsR family compare
Atu1225 -0.8 -1.7 hypothetical protein compare
Atu2800 -0.8 -2.2 precorrin-3B C17-methyltransferase compare
Atu4617 -0.8 -5.8 dTDP-D-glucose-4,6-dehydratase compare
Atu2554 -0.8 -1.8 lysyl-tRNA synthetase compare
Atu1739 -0.8 -2.6 permease compare
Atu8034 -0.8 -1.3 hypothetical protein compare
Atu4481 -0.8 -2.4 LacI family transcriptional regulator compare
Atu2237 -0.7 -2.8 cytochrome c1 compare
Atu4514 -0.7 -3.1 RpiR family transcriptional regulator compare
Atu0101 -0.7 -3.6 cytochrome c compare
Atu4614 -0.7 -4.5 glycosyltransferase compare
Atu0723 -0.7 -1.4 FAD dependent oxidoreductase compare
Atu4001 -0.7 -3.8 3-oxoacyl-ACP synthase compare
Atu2495 -0.7 -2.5 flavoprotein oxidoreductase compare
Atu2728 -0.7 -2.5 beta (1-->2) glucan export ATP-binding protein compare
Atu0923 -0.7 -2.2 hypothetical protein compare
Atu3908 -0.7 -4.4 GntR family transcriptional regulator compare
Atu5115 -0.7 -1.6 hypothetical protein compare
Atu2116 -0.7 -3.1 hypothetical protein compare
Atu2746 -0.7 -2.3 hypothetical protein compare
Atu2127 -0.7 -3.7 L-carnitine dehydratase compare
Atu4618 -0.7 -4.7 dTDP-rhamnose-3,5-epimerase compare
Atu0332 -0.6 -3.8 RNA polymerase sigma-54 factor compare
Atu1455 -0.6 -1.9 hypothetical protein compare
Atu0421 -0.6 -1.2 ABC transporter, membrane spanning protein compare
Atu8052 -0.6 -1.5 hypothetical protein compare
Atu4686 -0.6 -1.8 hypothetical protein compare
Atu3521 -0.6 -3.1 permease compare
Atu1810 -0.6 -0.7 hypothetical protein compare
Atu2762 -0.6 -2.8 hypothetical protein compare
Atu3733 -0.6 -2.1 hypothetical protein compare
Atu4773 -0.6 -1.2 two component response regulator compare
Atu1714 -0.6 -1.2 exonuclease III compare
Atu2606 -0.6 -1.9 transcriptional regulator, GntR family compare
Atu1217 -0.6 -3.4 cysteine synthase compare
Atu3280 -0.6 -3.7 GntR family transcriptional regulator compare
Atu4346 -0.6 -2.4 hypothetical protein compare
Atu3264 -0.6 -2.4 IclR family transcriptional regulator compare
Atu2194 -0.6 -2.6 hypothetical protein compare
Atu2555 -0.6 -3.0 L-lysine 2,3-aminomutase compare
Atu0189 -0.6 -2.0 ABC transporter, membrane spanning protein (peptide) compare
Atu2432 -0.6 -1.9 hypothetical protein compare
Atu0533 -0.6 -2.2 putative inhibitor of septum formation compare
Atu1463 -0.6 -2.5 glycine cleavage system component H compare
Atu0803 -0.6 -5.0 pyruvate,orthophosphate dikinase compare
Atu2484 -0.6 -1.0 hypothetical protein compare
Atu3963 -0.6 -2.7 GntR family transcriptional regulator compare
Atu2590 -0.6 -3.5 hypothetical protein compare
Atu1364 -0.6 -3.4 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3353 -0.6 -3.9 mannose-1-phosphate guanylyltransferase compare
Atu3465 -0.6 -1.1 metallo-beta-lactamase superfamily protein compare
Atu2633 -0.6 -1.7 RhtB family transporter compare
Atu1076 -0.6 -1.9 colicin V production protein compare
Atu5107 -0.6 -2.3 hypothetical protein compare
Atu0972 -0.5 -2.0 lipA protein compare
Atu0536 -0.5 -3.4 hypothetical protein compare
Atu0477 -0.5 -1.0 hypothetical protein compare
Atu4176 -0.5 -2.9 hypothetical protein compare
Atu3999 -0.5 -1.2 dithiobiotin synthetase compare
Atu4831 -0.5 -3.0 hypothetical protein compare
Atu0671 -0.5 -2.4 hypothetical protein compare
Atu4641 -0.5 -2.2 LysR family transcriptional regulator compare
Atu0149 -0.5 -2.0 enoyl-(acyl-carrier-protein) reductase compare
Atu0702 -0.5 -1.3 calcium-binding protein, regucalcin compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source Maltitol in Agrobacterium fabrum C58

For carbon source Maltitol across organisms