Experiment set10IT012 for Agrobacterium fabrum C58

Compare to:

Maltitol carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu3162 +3.2 20.4 LacI family transcriptional regulator compare
Atu0786 +0.9 6.2 peptidase, family M16 compare
Atu3006 +0.8 3.2 hypothetical protein compare
Atu5164 +0.8 1.6 type IV secretion protein AvhB3 compare
Atu4896 +0.8 1.2 acetyltransferase compare
Atu4187 +0.8 1.7 tRNA-Met compare
Atu4527 +0.7 1.8 hypothetical protein compare
Atu2787 +0.7 0.9 hypothetical protein compare
Atu0572 +0.7 2.3 hypothetical protein compare
Atu3730 +0.7 1.2 hypothetical protein compare
Atu2057 +0.7 2.1 DNA helicase II compare
Atu4223 +0.7 1.4 sarcosine oxidase delta subunit compare
Atu4099 +0.7 5.1 hypothetical protein compare
Atu0585 +0.7 1.7 hypothetical protein compare
Atu1291 +0.7 2.2 hypothetical protein compare
Atu8041 +0.6 1.6 hypothetical protein compare
Atu1026 +0.6 1.0 hypothetical protein compare
Atu2200 +0.6 2.3 cold shock protein compare
Atu3337 +0.6 4.0 LacI family transcriptional regulator compare
Atu4897 +0.6 1.0 hypothetical protein compare
Atu4200 +0.6 1.4 hypothetical protein compare
Atu2433 +0.6 1.1 hypothetical protein compare
Atu1573 +0.6 1.0 hypothetical protein compare
Atu1354 +0.6 1.0 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu5057 +0.6 1.3 hypothetical protein compare
Atu3461 +0.6 1.3 GntR family transcriptional regulator compare
Atu3468 +0.6 0.6 hypothetical protein compare
Atu6036 +0.6 1.4 entry-exclusion protein compare
Atu0583 +0.6 3.1 hypothetical protein compare
Atu0593 +0.6 3.5 ABC transporter, membrane spanning protein compare
Atu0606 +0.6 2.1 hypothetical protein compare
Atu1818 +0.6 1.2 hypothetical protein compare
Atu0580 +0.6 1.6 flagellar biosynthetic protein compare
Atu0545 +0.6 3.8 flagella associated protein compare
Atu2201 +0.6 1.6 hydrolase compare
Atu5430 +0.5 1.1 hypothetical protein compare
Atu4448 +0.5 3.7 sorbitol/mannitol ABC transporter permease compare
Atu2694 +0.5 1.4 hypothetical protein compare
Atu0547 +0.5 3.2 flagellar protein compare
Atu0677 +0.5 0.7 hypothetical protein compare
Atu1848 +0.5 2.7 transcriptional regulator, GntR family compare
Atu0594 +0.5 3.7 alpha-glucosidase compare
Atu0201 +0.5 1.6 hypothetical protein compare
Atu4890 +0.5 1.1 IS426 transposase compare
Atu3012 +0.5 0.9 hypothetical protein compare
Atu2044 +0.5 1.9 HFLC protein compare
Atu8087 +0.5 0.5 putative peptidoglycan binding protein compare
Atu4450 +0.5 3.8 sugar ABC transporter ATPase compare
Atu2657 +0.5 1.6 hypothetical protein compare
Atu1068 +0.5 2.4 hypothetical protein compare
Atu4133 +0.5 1.6 hypothetical protein compare
Atu1366 +0.5 1.8 hypothetical protein compare
Atu0690 +0.5 1.5 hypothetical protein compare
Atu3193 +0.5 2.0 MarR family transcriptional regulator compare
Atu1176 +0.5 2.4 hypothetical protein compare
Atu0562 +0.5 1.2 flagellar motor switch protein FliN compare
Atu3697 +0.5 1.6 ATP-dependent protease LA 2 compare
Atu0555 +0.5 3.9 flagellar basal-body rod protein FlgB compare
Atu4447 +0.4 3.5 sorbitol ABC transporter substrate-binding protein compare
Atu3892 +0.4 1.4 hypothetical protein compare
Atu5513 +0.4 1.2 cold shock protein compare
Atu0280 +0.4 1.0 hypothetical protein compare
Atu2457 +0.4 1.8 hypothetical protein compare
Atu0561 +0.4 2.6 flagellar motor switch protein compare
Atu1692 +0.4 1.1 hypothetical protein compare
Atu1760 +0.4 0.8 hypothetical protein compare
Atu1149 +0.4 0.9 adenylate cyclase compare
Atu1888 +0.4 3.7 two component sensor kinase compare
Atu0552 +0.4 3.0 flagellar basal-body rod protein compare
Atu0557 +0.4 3.2 flagellum-specific ATP synthase compare
Atu4819 +0.4 1.8 hypothetical protein compare
Atu1333 +0.4 1.2 outer membrane protein compare
Atu1182 +0.4 0.9 hypothetical protein compare
Atu2184 +0.4 2.2 transcriptional regulator, AsnC family compare
Atu1752 +0.4 2.3 hypothetical protein compare
Atu3071 +0.4 2.3 hypothetical protein compare
Atu8035 +0.4 1.1 hypothetical protein compare
Atu8151 +0.4 1.1 hypothetical protein compare
Atu1867 +0.4 2.4 glutamate racemase compare
Atu1371 +0.4 2.2 glycerophosphoryl diester phosphodiesterase compare
Atu0523 +0.4 3.4 flagellar M-ring protein compare
Atu2317 +0.4 1.6 hypothetical protein compare
Atu4543 +0.4 1.4 LysR family transcriptional regulator compare
Atu3634 +0.4 2.0 penicillin-binding protein dacf precursor compare
Atu0564 +0.4 3.2 flagellar biosynthetic protein compare
Atu8116 +0.4 2.8 hypothetical protein compare
Atu1492 +0.4 2.0 transcriptional regulator, ArsR family compare
Atu4677 +0.4 0.5 hypothetical protein compare
Atu4505 +0.4 2.8 LacI family transcriptional regulator compare
Atu0554 +0.4 2.7 flagellar basal-body rod protein compare
Atu0559 +0.4 2.0 hypothetical protein compare
Atu5130 +0.4 2.6 attachment protein compare
Atu4894 +0.4 1.9 transposase compare
Atu0893 +0.4 1.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu0377 +0.4 1.9 hypothetical protein compare
Atu8191 +0.4 0.6 hypothetical protein compare
Atu4779 +0.4 0.9 hypothetical protein compare
Atu2204 +0.4 1.1 hypothetical protein compare
Atu0141 +0.4 0.8 cytochrome O ubiquinol oxidase subunit I compare
Atu4076 +0.4 2.2 glucose-1-phosphate adenylyltransferase compare
Atu0836 +0.4 1.3 Glutathione-S-transferase compare
Atu2388 +0.4 2.5 ABC transporter, nucleotide binding/ATPase protein (nitrate) compare
Atu3387 +0.4 1.2 sigma factor compare
Atu1570 +0.4 0.5 hypothetical protein compare
Atu4606 +0.4 2.3 hypothetical protein compare
Atu3256 +0.4 2.0 zinc-binding dehydrogenase compare
Atu0932 +0.4 2.0 hypothetical protein compare
Atu0292 +0.4 2.4 iron-sulfur cluster binding protein compare
Atu1241 +0.4 1.2 hypothetical protein compare
Atu2475 +0.4 1.9 ABC transporter, membrane spanning protein compare
Atu2067 +0.3 0.5 hypothetical protein compare
Atu0535 +0.3 1.9 hypothetical protein compare
Atu3620 +0.3 1.5 hypothetical protein compare
Atu0592 +0.3 2.3 ABC transporter, membrane spanning protein compare
Atu0568 +0.3 2.5 hypothetical protein compare
Atu0558 +0.3 2.5 flagellar basal body rod protein compare
Atu1317 +0.3 1.9 metal dependent hydrolase compare
Atu1175 +0.3 0.8 hypothetical protein compare
Atu5010 +0.3 1.6 hypothetical protein compare
Atu0834 +0.3 2.4 hypothetical protein compare
Atu3926 +0.3 1.4 translation initiation inhibitor compare
Atu3613 +0.3 1.4 hypothetical protein compare
Atu0579 +0.3 2.0 hook formation protein compare
Atu3020 +0.3 1.8 GntR family transcriptional regulator compare
Atu2680 +0.3 1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu5088 +0.3 1.2 hypothetical protein compare
Atu3421 +0.3 1.6 hypothetical protein compare
Atu3011 +0.3 1.1 ArsR family transcriptional regulator compare
Atu0569 +0.3 2.6 flagellar motor protein, PAL/OmpA family compare
Atu0502 +0.3 2.1 acetyl-CoA acetyltransferase compare
Atu3242 +0.3 1.4 hypothetical protein compare
Atu5061 +0.3 1.6 glycerophosphoryl diester phosphodiesterase compare
Atu2658 +0.3 1.9 GMP synthase - glutamine amidotransferase protein compare
Atu0048 +0.3 2.6 hypothetical protein compare
Atu2130 +0.3 1.0 hypothetical protein compare
Atu8046 +0.3 0.9 hypothetical protein compare
Atu8200 +0.3 1.2 hypothetical protein compare
Atu0566 +0.3 0.9 hypothetical protein compare
Atu8128 +0.3 1.7 putative bacteriophage P2 tail protein compare
Atu3428 +0.3 1.1 hypothetical protein compare
Atu0571 +0.3 2.6 chemotaxis MotD protein compare
Atu0595 +0.3 2.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu2630 +0.3 1.9 hypothetical protein compare
Atu5549 +0.3 1.8 hypothetical protein compare
Atu2017 +0.3 0.4 hypothetical protein compare
Atu0904 +0.3 1.1 hypothetical protein compare
Atu4530 +0.3 1.4 TetR family transcriptional regulator compare
Atu0582 +0.3 2.4 flagellar biosynthetic protein FLIR compare
Atu4743 +0.3 1.9 LacI family transcriptional regulator compare
Atu8029 +0.3 0.7 hypothetical protein compare
Atu1021 +0.3 0.7 outer membrane protein compare
Atu1869 +0.3 1.5 hypothetical protein compare
Atu3494 +0.3 1.3 hypothetical protein compare
Atu0176 +0.3 2.0 ABC transporter, nucleotide binding/ATPase protein (phosphonate) compare
Atu0563 +0.3 2.3 flagellar motor switch protein FliG compare
Atu3074 +0.3 1.9 short chain dehydrogenase compare
Atu0581 +0.3 2.4 flagellar biosynthesis protein compare
Atu2164 +0.3 1.4 hypothetical protein compare
Atu2827 +0.3 0.8 hypothetical protein compare
Atu1838 +0.3 1.3 ABC transporter, substrate binding protein (amino acid) compare
Atu2025 +0.3 1.5 transcriptional regulator compare
Atu1865 +0.3 1.1 hypothetical protein compare
Atu4839 +0.3 2.1 C factor compare
Atu1453 +0.3 1.5 hypothetical protein compare
Atu3692 +0.3 1.8 sigma factor compare
Atu5052 +0.3 2.2 small heat shock protein compare
Atu8185 +0.3 1.1 hypothetical protein compare
Atu2669 +0.3 1.6 RhtB family transporter compare
Atu4144 +0.3 0.4 hypothetical protein compare
Atu1351 +0.3 1.8 hypothetical protein compare
Atu5485 +0.3 0.9 hypothetical protein compare
Atu3510 +0.3 0.7 amidohydrolase compare
Atu1565 +0.3 0.8 serine acetyltransferase compare
Atu0899 +0.3 1.9 dihydrodipicolinate synthase compare
Atu0503 +0.3 2.3 enoyl-CoA hydratase compare
Atu1801 +0.3 1.1 hypothetical protein compare
Atu2479 +0.3 1.6 tRNA-Gly compare
Atu2367 +0.3 1.0 hypothetical protein compare
Atu0284 +0.3 2.3 tryptophan-rich sensory protein compare
Atu1494 +0.3 1.6 metal dependent hydrolase compare
Atu2561 +0.3 1.4 ABC transporter, substrate binding protein (molybdate) compare
Atu4662 +0.3 1.6 oligopeptide ABC transporter permease compare
Atu1203 +0.3 1.2 hypothetical protein compare
Atu3678 +0.3 1.1 siderophore biosynthesis protein compare
Atu0591 +0.3 2.2 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu1435 +0.3 1.4 hypothetical protein compare
Atu0217 +0.3 2.0 components of type IV pilus compare
Atu5493 +0.3 1.3 hypothetical protein compare
Atu1054 +0.3 1.8 hypothetical protein compare
Atu0386 +0.3 0.7 hypothetical protein compare
Atu0007 +0.3 1.6 hypothetical protein compare
Atu4266 +0.3 1.9 GntR family transcriptional regulator compare
Atu2045 +0.3 1.4 HFLK protein compare
Atu1100 +0.3 2.1 hypothetical protein compare
Atu2407 +0.3 1.0 urease gamma subunit compare
Atu1587 +0.3 1.7 hypothetical protein compare
Atu2236 +0.3 1.2 adenine phosphoribosyltransferase compare
Atu8155 +0.3 1.1 hypothetical protein compare
Atu3694 +0.3 2.0 penicillin binding protein compare
Atu0795 +0.3 0.6 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source Maltitol in Agrobacterium fabrum C58

For carbon source Maltitol across organisms