Experiment set10IT011 for Agrobacterium fabrum C58

Compare to:

Maltotriose hydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu4144 +1.2 1.9 hypothetical protein compare
Atu4896 +1.0 2.4 acetyltransferase compare
Atu3337 +1.0 6.7 LacI family transcriptional regulator compare
Atu1847 +0.9 1.8 hypothetical protein compare
Atu3598 +0.9 1.4 thiol:disulfide interchange protein compare
Atu3031 +0.8 1.6 hypothetical protein compare
Atu0524 +0.7 4.9 transcriptional regulator, LuxR family compare
Atu3510 +0.7 2.7 amidohydrolase compare
Atu0551 +0.6 2.7 flagellar protein FLGA precursor compare
Atu0976 +0.6 2.3 cycL protein compare
Atu0525 +0.6 2.7 transcriptional regulator, LuxR family compare
Atu2657 +0.6 1.8 hypothetical protein compare
Atu0553 +0.6 2.7 flagellar hook-basal body complex protein compare
Atu1871 +0.6 2.5 glutathione S-transferase compare
Atu4556 +0.6 3.9 LacI family transcriptional regulator compare
Atu2433 +0.6 1.0 hypothetical protein compare
Atu0630 +0.6 1.8 hypothetical protein compare
Atu2193 +0.6 0.9 hypothetical protein compare
Atu5146 +0.6 1.8 hypothetical protein compare
Atu0791 +0.6 4.1 transcriptional regulator, GntR family compare
Atu2787 +0.6 0.7 hypothetical protein compare
Atu0540 +0.6 1.8 hypothetical protein compare
Atu6036 +0.5 1.2 entry-exclusion protein compare
Atu0795 +0.5 1.0 hypothetical protein compare
Atu5489 +0.5 2.3 hypothetical protein compare
Atu1291 +0.5 1.3 hypothetical protein compare
Atu3807 +0.5 2.2 AsnC family transcriptional regulator compare
Atu4894 +0.5 2.4 transposase compare
Atu1968 +0.5 1.2 hypothetical protein compare
Atu4137 +0.5 2.5 hypothetical protein compare
Atu3267 +0.5 1.8 dipeptide ABC transporter permease compare
Atu2677 +0.5 1.5 protein tyrosine phosphatase compare
Atu4791 +0.5 1.4 hypothetical protein compare
Atu2135 +0.5 2.7 transcriptional regulator, TetR family compare
Atu5513 +0.5 1.3 cold shock protein compare
Atu1587 +0.5 2.8 hypothetical protein compare
Atu0572 +0.5 1.2 hypothetical protein compare
Atu0523 +0.5 3.7 flagellar M-ring protein compare
Atu4677 +0.4 0.6 hypothetical protein compare
Atu1836 +0.4 1.1 hypothetical protein compare
Atu8170 +0.4 2.6 hypothetical protein compare
Atu1742 +0.4 2.7 hypothetical protein compare
Atu1888 +0.4 3.6 two component sensor kinase compare
Atu4850 +0.4 2.4 hypothetical protein compare
Atu1320 +0.4 2.0 acetyltransferase compare
Atu0809 +0.4 0.8 hypothetical protein compare
Atu1570 +0.4 0.6 hypothetical protein compare
Atu4406 +0.4 1.5 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu3653 +0.4 1.6 hypothetical protein compare
Atu0135 +0.4 0.7 uracil phosphoribosyltransferase compare
Atu4540 +0.4 1.2 protocatechuate 3,4-dioxygenase subunit beta compare
Atu6195 +0.4 2.4 conserved hypothetical protein compare
Atu8025 +0.4 0.9 hypothetical protein compare
Atu1952 +0.4 0.9 hypothetical protein compare
Atu5034 +0.4 0.7 hypothetical protein compare
Atu4753 +0.4 1.7 amino acid ABC transporter permease compare
Atu5475 +0.4 1.2 hypothetical protein compare
Atu3517 +0.4 2.4 acetyltransferase compare
Atu3590 +0.4 2.4 transporter compare
Atu8036 +0.4 2.0 protein YBGT-like protein compare
Atu1232 +0.4 1.0 hypothetical protein compare
Atu0555 +0.4 2.8 flagellar basal-body rod protein FlgB compare
Atu0558 +0.4 2.5 flagellar basal body rod protein compare
Atu3052 +0.4 1.9 MarR family transcriptional regulator compare
Atu5467 +0.4 1.8 hypothetical protein compare
Atu2220 +0.4 2.3 hypothetical protein compare
Atu2273 +0.4 2.0 hypothetical protein compare
Atu8191 +0.4 1.0 hypothetical protein compare
Atu2568 +0.4 2.1 thiamine biosynthesis oxidoreductase compare
Atu0871 +0.4 2.1 branched-chain-amino-acid aminotransferase compare
Atu1009 +0.4 1.4 hypothetical protein compare
Atu5470 +0.4 1.9 hypothetical protein compare
Atu0841 +0.4 2.7 hypothetical protein compare
Atu2270 +0.4 0.9 ATP-dependent Clp protease, proteolytic subunit compare
Atu0971 +0.4 1.5 two component sensor kinase compare
Atu1338 +0.4 2.0 3-oxoacyl-(acyl carrier protein) reductase compare
Atu0563 +0.4 3.0 flagellar motor switch protein FliG compare
Atu0225 +0.4 0.5 hypothetical protein compare
Atu1573 +0.4 0.7 hypothetical protein compare
Atu4452 +0.4 1.6 hypothetical protein compare
Atu1483 +0.4 1.4 cytochrome b561 compare
Atu4662 +0.4 2.1 oligopeptide ABC transporter permease compare
Atu0176 +0.4 1.9 ABC transporter, nucleotide binding/ATPase protein (phosphonate) compare
Atu2367 +0.4 1.7 hypothetical protein compare
Atu2293 +0.4 0.8 hypothetical protein compare
Atu0585 +0.4 1.5 hypothetical protein compare
Atu0568 +0.4 2.4 hypothetical protein compare
Atu5161 +0.4 2.2 hypothetical protein compare
Atu0997 +0.4 1.5 hypothetical protein compare
Atu1868 +0.4 2.0 tRNA/rRNA methyltransferase compare
Atu8046 +0.4 1.6 hypothetical protein compare
Atu1550 +0.4 1.9 polypeptide deformylase compare
Atu0119 +0.4 0.7 hypothetical protein compare
Atu0869 +0.4 2.5 hypothetical protein compare
Atu4787 +0.4 2.1 inositol monophosphatase compare
Atu0557 +0.4 2.8 flagellum-specific ATP synthase compare
Atu2198 +0.4 2.5 hypothetical protein compare
Atu0561 +0.4 2.5 flagellar motor switch protein compare
Atu2200 +0.4 1.2 cold shock protein compare
Atu3303 +0.4 2.4 cellulose synthesis protein compare
Atu0999 +0.4 2.2 magnesium transport protein compare
Atu1468 +0.4 1.9 hypothetical protein compare
Atu5493 +0.3 1.9 hypothetical protein compare
Atu1884 +0.3 1.6 ABC transporter, substrate binding protein (aliphatic sulfonate) compare
Atu0470 +0.3 0.9 hypothetical protein compare
Atu2464 +0.3 0.9 formyltetrahydrofolate deformylase compare
Atu0955 +0.3 1.6 hypothetical protein compare
Atu1203 +0.3 1.0 hypothetical protein compare
Atu2768 +0.3 1.7 hypothetical protein compare
Atu1629 +0.3 0.6 transcriptional regulator, ArsR family compare
Atu1314 +0.3 1.8 transcriptional regulator, TetR family compare
Atu8162 +0.3 0.5 hypothetical protein compare
Atu1864 +0.3 1.8 putative homoserine/homoserine lactone efflux protein compare
Atu1150 +0.3 2.2 hypothetical protein compare
Atu1676 +0.3 1.9 para-aminobenzoate synthase component I compare
Atu2282 +0.3 1.9 thymidine kinase compare
Atu1293 +0.3 1.3 hypothetical protein compare
Atu4187 +0.3 0.6 tRNA-Met compare
Atu3235 +0.3 2.1 hypothetical protein compare
Atu0545 +0.3 2.1 flagella associated protein compare
Atu0386 +0.3 0.8 hypothetical protein compare
Atu1021 +0.3 0.7 outer membrane protein compare
Atu0156 +0.3 2.0 hypothetical protein compare
Atu4738 +0.3 1.2 chloramphenicol acetyltransferase compare
Atu1865 +0.3 1.4 hypothetical protein compare
Atu3012 +0.3 0.6 hypothetical protein compare
Atu4418 +0.3 1.4 glutaryl-CoA dehydrogenase compare
Atu4779 +0.3 0.7 hypothetical protein compare
Atu4239 +0.3 1.9 flavoprotein oxidoreductase compare
Atu4505 +0.3 2.0 LacI family transcriptional regulator compare
Atu0582 +0.3 2.1 flagellar biosynthetic protein FLIR compare
Atu4162 +0.3 2.0 two-component response regulator compare
Atu3579 +0.3 1.0 lactoylglutathione lyase compare
Atu5010 +0.3 1.2 hypothetical protein compare
Atu4630 +0.3 0.8 hypothetical protein compare
Atu3014 +0.3 0.8 hypothetical protein compare
Atu4767 +0.3 1.4 hypothetical protein compare
Atu3775 +0.3 0.9 hypothetical protein compare
Atu2399 +0.3 1.5 hypothetical protein compare
Atu2571 +0.3 1.7 acyl carrier protein, putative compare
Atu2041 +0.3 1.0 acetyltransferase compare
Atu1440 +0.3 2.1 hypothetical protein compare
Atu0280 +0.3 0.8 hypothetical protein compare
Atu2017 +0.3 0.5 hypothetical protein compare
Atu5471 +0.3 1.6 hypothetical protein compare
Atu0846 +0.3 1.3 transcriptional regulator, MarR family compare
Atu3496 +0.3 1.7 hypothetical protein compare
Atu3605 +0.3 2.3 hypothetical protein compare
Atu0559 +0.3 2.0 hypothetical protein compare
Atu0300 +0.3 1.4 methyltransferase compare
Atu3193 +0.3 2.0 MarR family transcriptional regulator compare
Atu0554 +0.3 1.7 flagellar basal-body rod protein compare
Atu0552 +0.3 2.1 flagellar basal-body rod protein compare
Atu5157 +0.3 0.9 hypothetical protein compare
Atu3032 +0.3 1.3 hypothetical protein compare
Atu0750 +0.3 2.5 ABC transporter, membrane spanning protein compare
Atu0938 +0.3 0.9 transcriptional regulator, MerR family compare
Atu3829 +0.3 1.6 LysR family transcriptional regulator compare
Atu1649 +0.3 2.0 hypothetical protein compare
Atu0959 +0.3 1.6 hypothetical protein compare
Atu5169 +0.3 1.4 type IV secretion protein AvhB8 compare
Atu2827 +0.3 1.4 hypothetical protein compare
Atu0859 +0.3 0.8 hypothetical protein compare
Atu3071 +0.3 1.2 hypothetical protein compare
Atu1731 +0.3 1.7 xanthine-guanine phosphoribosyltransferase compare
Atu6040 +0.3 1.5 conjugal transfer protein compare
Atu0886 +0.3 0.6 hypothetical protein compare
Atu4680 +0.3 1.0 amino acid ABC transporter permease compare
Atu3491 +0.3 1.0 hypothetical protein compare
Atu2694 +0.3 0.9 hypothetical protein compare
Atu0781 +0.3 1.4 hypothetical protein compare
Atu0177 +0.3 2.1 ABC transporter, nucleotide binding/ATPase protein (phosphonate) compare
Atu1818 +0.3 0.9 hypothetical protein compare
Atu1896 +0.3 1.1 hypothetical protein compare
Atu1857 +0.3 1.0 inositol monophosphatase family protein compare
Atu5427 +0.3 1.2 hypothetical protein compare
Atu4531 +0.3 2.0 3-dehydroquinate dehydratase compare
Atu3823 +0.3 1.8 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase compare
Atu3327 +0.3 0.9 succinoglycan exopolysaccharide synthesis protein compare
Atu4290 +0.3 0.6 hypothetical protein compare
Atu1243 +0.3 2.1 streptomycin resistance protein compare
Atu1994 +0.3 1.4 acyl-CoA hydrolase compare
Atu0924 +0.3 1.2 hypothetical protein compare
Atu0668 +0.3 1.4 hypothetical protein compare
Atu5429 +0.3 1.8 transcriptional regulator compare
Atu1409 +0.3 1.2 ureidoglycolate hydrolase compare
Atu3632 +0.3 1.5 hypothetical protein compare
Atu0292 +0.3 1.7 iron-sulfur cluster binding protein compare
Atu2388 +0.3 1.5 ABC transporter, nucleotide binding/ATPase protein (nitrate) compare
Atu0885 +0.3 0.8 hypothetical protein compare
Atu4427 +0.3 1.8 replicative DNA helicase compare
Atu1031 +0.3 1.2 hypothetical protein compare
Atu3915 +0.3 1.7 MerR family transcriptional regulator compare
Atu1366 +0.3 1.1 hypothetical protein compare
Atu5408 +0.3 1.9 ABC transporter membrane spanning protein (amino acid) compare
Atu0564 +0.3 2.1 flagellar biosynthetic protein compare
Atu2011 +0.3 1.2 hypothetical protein compare
Atu4840 +0.3 1.3 hypothetical protein compare
Atu1869 +0.3 1.1 hypothetical protein compare
Atu4442 +0.3 1.4 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source Maltotriose hydrate in Agrobacterium fabrum C58

For carbon source Maltotriose hydrate across organisms