Experiment set10IT009 for Agrobacterium fabrum C58

Compare to:

trans-aconitic acid carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu4144 +1.0 1.8 hypothetical protein compare
Atu2017 +0.9 1.5 hypothetical protein compare
Atu2025 +0.9 5.0 transcriptional regulator compare
Atu8096 +0.7 1.7 hypothetical protein compare
Atu1737 +0.7 2.4 hypothetical protein compare
Atu8154 +0.7 2.2 Plasmid stabilization system protein compare
Atu0236 +0.7 2.1 hypothetical protein compare
Atu3491 +0.7 2.5 hypothetical protein compare
Atu4882 +0.6 1.3 hypothetical protein compare
Atu0585 +0.6 1.8 hypothetical protein compare
Atu4290 +0.6 1.2 hypothetical protein compare
Atu0135 +0.6 1.3 uracil phosphoribosyltransferase compare
Atu3160 +0.6 2.6 hypothetical protein compare
Atu3012 +0.6 1.2 hypothetical protein compare
Atu2135 +0.6 2.5 transcriptional regulator, TetR family compare
Atu3579 +0.6 2.1 lactoylglutathione lyase compare
Atu4896 +0.6 1.3 acetyltransferase compare
Atu5057 +0.6 1.7 hypothetical protein compare
Atu0966 +0.6 2.1 hypothetical protein compare
Atu4677 +0.6 1.2 hypothetical protein compare
Atu8029 +0.6 1.4 hypothetical protein compare
Atu1333 +0.6 2.5 outer membrane protein compare
Atu2130 +0.6 2.1 hypothetical protein compare
Atu2634 +0.6 1.4 hypothetical protein compare
Atu8162 +0.6 0.5 hypothetical protein compare
Atu1760 +0.5 1.1 hypothetical protein compare
Atu1836 +0.5 1.3 hypothetical protein compare
Atu1359 +0.5 0.9 dnaK deletion suppressor protein compare
Atu2192 +0.5 1.2 hypothetical protein compare
Atu0886 +0.5 1.2 hypothetical protein compare
Atu3775 +0.5 1.5 hypothetical protein compare
Atu4665 +0.5 2.5 alpha-galactosidase compare
Atu4606 +0.5 2.9 hypothetical protein compare
Atu1503 +0.5 0.8 hypothetical protein compare
Atu0540 +0.5 1.4 hypothetical protein compare
Atu3008 +0.5 0.5 hypothetical protein compare
Atu2057 +0.5 1.1 DNA helicase II compare
Atu1896 +0.5 1.3 hypothetical protein compare
Atu2282 +0.5 2.3 thymidine kinase compare
Atu2354 +0.5 1.5 transcriptional regulator, MarR family compare
Atu4162 +0.5 2.9 two-component response regulator compare
Atu2258 +0.5 1.9 acetyltransferase compare
Atu0225 +0.4 0.6 hypothetical protein compare
Atu1702 +0.4 2.7 stationary-phase survival protein compare
Atu8150 +0.4 2.0 hypothetical protein compare
Atu0280 +0.4 1.0 hypothetical protein compare
Atu4779 +0.4 1.2 hypothetical protein compare
Atu1897 +0.4 2.5 short chain dehydrogenase compare
Atu1483 +0.4 1.7 cytochrome b561 compare
Atu4530 +0.4 2.8 TetR family transcriptional regulator compare
Atu2788 +0.4 2.2 citrate lyase, beta subunit compare
Atu1971 +0.4 2.0 hypothetical protein compare
Atu1041 +0.4 1.9 methyltransferase compare
Atu3387 +0.4 2.1 sigma factor compare
Atu1680 +0.4 2.2 peptidyl prolyl cis-trans isomerase compare
Atu1149 +0.4 0.9 adenylate cyclase compare
Atu0841 +0.4 2.4 hypothetical protein compare
Atu1501 +0.4 1.7 hypothetical protein compare
Atu1005 +0.4 1.9 hypothetical protein compare
Atu1858 +0.4 1.5 hypothetical protein compare
Atu8149 +0.4 1.8 hypothetical protein compare
Atu0755 +0.4 1.6 hypothetical protein compare
Atu1287 +0.4 1.4 hypothetical protein compare
Atu0551 +0.4 1.8 flagellar protein FLGA precursor compare
Atu0673 +0.4 2.2 hypothetical protein compare
Atu0630 +0.4 1.3 hypothetical protein compare
Atu1346 +0.4 2.6 phenazine antibiotic biosynthesis related protein compare
Atu4607 +0.4 2.0 sugar acetylase compare
Atu1559 +0.4 1.8 hypothetical protein compare
Atu1301 +0.4 1.2 hypothetical protein compare
Atu8053 +0.4 1.7 hypothetical protein compare
Atu1019 +0.4 0.9 hypothetical protein compare
Atu5471 +0.4 1.3 hypothetical protein compare
Atu5007 +0.4 2.3 santhopine-responsive transcriptional repressor compare
Atu1865 +0.4 2.1 hypothetical protein compare
Atu2236 +0.4 1.4 adenine phosphoribosyltransferase compare
Atu1847 +0.4 0.9 hypothetical protein compare
Atu0943 +0.4 1.2 hypothetical protein compare
Atu0267 +0.4 1.9 hypothetical protein compare
Atu3730 +0.4 0.6 hypothetical protein compare
Atu0772 +0.4 1.8 hypothetical protein compare
Atu0815 +0.4 1.6 hypothetical protein compare
Atu0156 +0.4 1.7 hypothetical protein compare
Atu0883 +0.3 2.0 hypothetical protein compare
Atu4445 +0.3 1.8 ABC transporter permease compare
Atu0427 +0.3 1.2 hypothetical protein compare
Atu1250 +0.3 2.2 hypothetical protein compare
Atu6131 +0.3 1.4 TraR Antiactivator compare
Atu3605 +0.3 1.9 hypothetical protein compare
Atu3598 +0.3 0.7 thiol:disulfide interchange protein compare
Atu1699 +0.3 1.4 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu1321 +0.3 1.4 hypothetical protein compare
Atu1565 +0.3 1.1 serine acetyltransferase compare
Atu1068 +0.3 2.0 hypothetical protein compare
Atu1366 +0.3 1.2 hypothetical protein compare
Atu8017 +0.3 1.3 hypothetical protein compare
Atu1435 +0.3 1.4 hypothetical protein compare
Atu3515 +0.3 1.5 hypothetical protein compare
Atu6171 +0.3 2.2 component of type IV secretion system compare
Atu1422 +0.3 2.1 transcriptional regulator, MarR family compare
Atu5517 +0.3 1.5 hypothetical protein compare
Atu1251 +0.3 2.2 O-acetylhomoserine sulfhydrylase compare
Atu0553 +0.3 1.4 flagellar hook-basal body complex protein compare
Atu3728 +0.3 2.0 hypothetical protein compare
Atu0488 +0.3 0.9 hypothetical protein compare
Atu2044 +0.3 2.1 HFLC protein compare
Atu1643 +0.3 2.0 hypothetical protein compare
Atu4068 +0.3 0.7 sarcosine oxidase delta subunit compare
Atu2030 +0.3 2.0 ECF family sigma factor compare
Atu2273 +0.3 1.6 hypothetical protein compare
Atu0549 +0.3 2.3 hypothetical protein compare
Atu2472 +0.3 0.9 hypothetical protein compare
Atu0997 +0.3 1.4 hypothetical protein compare
Atu1323 +0.3 1.1 hypothetical protein compare
Atu1368 +0.3 2.0 hypothetical protein compare
Atu4070 +0.3 1.6 sarcosine oxidase gamma subunit compare
Atu0935 +0.3 1.6 hypothetical protein compare
Atu0780 +0.3 2.4 hypothetical protein compare
Atu2068 +0.3 1.4 hypothetical protein compare
Atu0948 +0.3 1.7 hypothetical protein compare
Atu1805 +0.3 1.4 hypothetical protein compare
Atu8176 +0.3 0.8 hypothetical protein compare
Atu3522 +0.3 1.3 glucans biosynthesis protein compare
Atu1558 +0.3 1.1 permease compare
Atu4433 +0.3 2.0 oligopeptide ABC transporter permease compare
Atu1461 +0.3 1.3 hypothetical protein compare
Atu3571 +0.3 2.1 hypothetical protein compare
Atu1910 +0.3 1.9 hypothetical protein compare
Atu4109 +0.3 1.9 hypothetical protein compare
Atu0162 +0.3 1.3 biopolymer transport protein compare
Atu2240 +0.3 1.5 hypothetical protein compare
Atu1641 +0.3 1.9 hypothetical protein compare
Atu5159 +0.3 1.3 hypothetical protein compare
Atu0109 +0.3 1.8 transcriptional regulator, MarR family compare
Atu2113 +0.3 1.4 N-acetylmuramoyl-L-alanine amidase compare
Atu1871 +0.3 1.5 glutathione S-transferase compare
Atu2322 +0.3 1.7 hypothetical protein compare
Atu0662 +0.3 1.3 transcriptional regulator, GntR family compare
Atu2450 +0.3 1.0 hypothetical protein compare
Atu4767 +0.3 1.3 hypothetical protein compare
Atu0561 +0.3 1.9 flagellar motor switch protein compare
Atu3822 +0.3 1.2 hypothetical protein compare
Atu0095 +0.3 1.5 hypothetical protein compare
Atu0578 +0.3 1.1 FlbT post-transcriptional regulator of flagellin compare
Atu5497 +0.3 1.7 hypothetical protein compare
Atu2478 +0.3 1.4 hypothetical protein compare
Atu1139 +0.3 1.6 hypothetical protein compare
Atu6159 +0.3 1.6 hypothetical protein compare
Atu4819 +0.3 1.1 hypothetical protein compare
Atu0546 +0.3 2.0 flagellar biosynthetic protein compare
Atu3031 +0.3 0.5 hypothetical protein compare
Atu0492 +0.3 1.8 hypothetical protein compare
Atu1661 +0.3 1.9 soluble pyridine nucleotide transhydrogenase compare
Atu2770 +0.3 1.7 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu3757 +0.3 1.0 hypothetical protein compare
Atu1869 +0.3 1.7 hypothetical protein compare
Atu4200 +0.3 0.9 hypothetical protein compare
Atu3169 +0.3 0.9 sorbitol/mannitol ABC transporter permease compare
Atu3960 +0.3 2.1 dihydrodipicolinate synthase compare
Atu1009 +0.3 1.0 hypothetical protein compare
Atu4006 +0.3 1.2 AsnC family transcriptional regulator compare
Atu8116 +0.3 1.6 hypothetical protein compare
Atu1667 +0.3 0.7 hypothetical protein compare
Atu3733 +0.3 0.9 hypothetical protein compare
Atu1021 +0.3 0.7 outer membrane protein compare
Atu4215 +0.3 1.2 cell division protein compare
Atu3510 +0.3 0.8 amidohydrolase compare
Atu0070 +0.3 1.5 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu0874 +0.3 1.5 acetyltransferase compare
Atu0468 +0.3 1.8 hypothetical protein compare
Atu1591 +0.3 1.5 hypothetical protein compare
Atu3457 +0.3 1.5 ABC transporter permease compare
Atu0493 +0.3 1.8 hypothetical protein compare
Atu0176 +0.3 1.7 ABC transporter, nucleotide binding/ATPase protein (phosphonate) compare
Atu4524 +0.3 1.8 oligopeptide ABC transporter permease compare
Atu1662 +0.3 1.7 hypothetical protein compare
Atu1511 +0.3 1.0 hypothetical protein compare
Atu1682 +0.3 1.2 hypothetical protein compare
Atu1557 +0.3 1.5 alcohol dehydrogenase compare
Atu0558 +0.3 1.5 flagellar basal body rod protein compare
Atu3001 +0.3 0.6 hypothetical protein compare
Atu1336 +0.3 0.8 hypothetical protein compare
Atu1343 +0.3 1.4 hypothetical protein compare
Atu0212 +0.3 1.7 hypothetical protein compare
Atu3097 +0.3 1.5 sn-glycerol-3-phosphate ABC transporter membrane protein compare
Atu1874 +0.3 0.7 RecA protein compare
Atu0869 +0.3 1.6 hypothetical protein compare
Atu3136 +0.3 1.5 ABC transporter permease compare
Atu1243 +0.3 1.9 streptomycin resistance protein compare
Atu0672 +0.3 1.9 transcriptional regulator, LysR family compare
Atu2597 +0.3 1.9 short-chain dehydrogenase compare
Atu6020 +0.3 1.3 conserved hypothetical protein compare
Atu0703 +0.3 1.0 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu3509 +0.3 1.5 hypothetical protein compare
Atu5169 +0.3 1.3 type IV secretion protein AvhB8 compare
Atu4605 +0.3 1.4 IS3 family transposase compare
Atu1980 +0.3 0.9 hypothetical protein compare
Atu1756 +0.3 1.6 hypothetical protein compare
Atu3511 +0.3 1.0 glutaredoxin compare
Atu4053 +0.3 0.7 succinoglycan biosynthesis protein compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source trans-aconitic acid in Agrobacterium fabrum C58

For carbon source trans-aconitic acid across organisms