Experiment set10IT007 for Agrobacterium fabrum C58

Compare to:

D-glutamine carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu1818 +1.0 2.6 hypothetical protein compare
Atu2433 +0.9 1.8 hypothetical protein compare
Atu5164 +0.8 1.5 type IV secretion protein AvhB3 compare
Atu4894 +0.7 3.5 transposase compare
Atu4896 +0.7 1.6 acetyltransferase compare
Atu5513 +0.7 1.5 cold shock protein compare
Atu6036 +0.7 1.7 entry-exclusion protein compare
Atu1026 +0.7 2.7 hypothetical protein compare
Atu1836 +0.7 2.0 hypothetical protein compare
Atu1573 +0.7 1.3 hypothetical protein compare
Atu4530 +0.6 3.4 TetR family transcriptional regulator compare
Atu3730 +0.6 0.9 hypothetical protein compare
Atu1694 +0.6 2.6 hypothetical protein compare
Atu3012 +0.6 1.3 hypothetical protein compare
Atu5157 +0.6 1.7 hypothetical protein compare
Atu0585 +0.6 2.3 hypothetical protein compare
Atu6098 +0.6 1.0 transcriptional regulator, HTH family compare
Atu5489 +0.6 2.8 hypothetical protein compare
Atu2484 +0.6 1.5 hypothetical protein compare
Atu0135 +0.6 1.2 uracil phosphoribosyltransferase compare
Atu1254 +0.5 1.0 transcriptional regulator, ArsR family compare
Atu8023 +0.5 1.9 hypothetical protein compare
Atu1847 +0.5 1.3 hypothetical protein compare
Atu3001 +0.5 1.1 hypothetical protein compare
Atu1241 +0.5 1.1 hypothetical protein compare
Atu0791 +0.5 4.1 transcriptional regulator, GntR family compare
Atu1968 +0.5 1.3 hypothetical protein compare
Atu3009 +0.5 0.8 exopolysaccharide production protein compare
Atu3008 +0.5 0.5 hypothetical protein compare
Atu0976 +0.5 1.0 cycL protein compare
Atu3697 +0.5 2.5 ATP-dependent protease LA 2 compare
Atu0276 +0.5 1.6 hypothetical protein compare
Atu1692 +0.5 1.4 hypothetical protein compare
Atu0809 +0.5 0.8 hypothetical protein compare
Atu3616 +0.5 3.0 hypothetical protein compare
Atu2733 +0.5 1.2 hypothetical protein compare
Atu1387 +0.5 1.5 transcriptional regulator, GntR family compare
Atu8185 +0.5 1.5 hypothetical protein compare
Atu1570 +0.5 0.7 hypothetical protein compare
Atu1830 +0.4 2.2 bacterioferritin comigratory protein compare
Atu3497 +0.4 1.0 hypothetical protein compare
Atu0812 +0.4 1.4 hypothetical protein compare
Atu4290 +0.4 1.2 hypothetical protein compare
Atu3006 +0.4 1.7 hypothetical protein compare
Atu0236 +0.4 1.3 hypothetical protein compare
Atu1952 +0.4 1.0 hypothetical protein compare
Atu0085 +0.4 1.6 tRNA pseudouridine 55 synthase compare
Atu0156 +0.4 2.0 hypothetical protein compare
Atu3036 +0.4 1.7 dipeptide ABC transporter permease compare
Atu3773 +0.4 1.2 hypothetical protein compare
Atu1160 +0.4 1.5 hypothetical protein compare
Atu6112 +0.4 2.0 conserved hypothetical protein compare
Atu4630 +0.4 1.6 hypothetical protein compare
Atu2407 +0.4 1.2 urease gamma subunit compare
Atu2271 +0.4 1.6 urease accessory protein compare
Atu0746 +0.4 1.8 hypothetical protein compare
Atu5109 +0.4 1.2 conjugal transfer protein compare
Atu4589 +0.4 1.5 transmembrane transport protein compare
Atu1333 +0.4 1.7 outer membrane protein compare
Atu1756 +0.4 1.9 hypothetical protein compare
Atu2457 +0.4 2.4 hypothetical protein compare
Atu4662 +0.4 1.6 oligopeptide ABC transporter permease compare
Atu5481 +0.4 2.2 ABC transporter membrane spanning protein compare
Atu1082 +0.4 1.8 branched-chain amino acid permease compare
Atu0280 +0.4 0.6 hypothetical protein compare
Atu4452 +0.4 1.9 hypothetical protein compare
Atu1327 +0.4 1.6 NADH-ubiquinone oxidoreductase compare
Atu4407 +0.4 0.8 periplasmic nitrate reductase, NapD protein compare
Atu4079 +0.4 1.3 hypothetical protein compare
Atu0755 +0.4 1.5 hypothetical protein compare
Atu4893 +0.4 1.8 hypothetical protein compare
Atu4641 +0.4 1.5 LysR family transcriptional regulator compare
Atu2794 +0.3 1.6 uroporphyrin-III C-methyltransferase compare
Atu1469 +0.3 1.4 hypothetical protein compare
Atu2344 +0.3 1.2 lactoylglutathione lyase compare
Atu3063 +0.3 2.2 ABC transporter permease compare
Atu2058 +0.3 0.9 hypothetical protein compare
Atu1724 +0.3 1.0 hypothetical protein compare
Atu2284 +0.3 2.2 hypothetical protein compare
Atu2025 +0.3 1.7 transcriptional regulator compare
Atu1591 +0.3 1.5 hypothetical protein compare
Atu0680 +0.3 1.5 hypothetical protein compare
Atu1858 +0.3 1.6 hypothetical protein compare
Atu1566 +0.3 0.5 hypothetical protein compare
Atu2069 +0.3 1.5 hypothetical protein compare
Atu5549 +0.3 1.8 hypothetical protein compare
Atu0751 +0.3 1.5 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu4042 +0.3 1.9 hypothetical protein compare
Atu1978 +0.3 1.7 hypothetical protein compare
Atu1559 +0.3 0.9 hypothetical protein compare
Atu1005 +0.3 1.5 hypothetical protein compare
Atu1887 +0.3 2.0 succinoglycan biosynthesis protein compare
Atu3688 +0.3 1.9 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu8165 +0.3 1.2 hypothetical protein compare
Atu2561 +0.3 1.5 ABC transporter, substrate binding protein (molybdate) compare
Atu0119 +0.3 0.6 hypothetical protein compare
Atu3757 +0.3 1.4 hypothetical protein compare
Atu1435 +0.3 1.4 hypothetical protein compare
Atu4897 +0.3 0.6 hypothetical protein compare
Atu0827 +0.3 1.4 hypothetical protein compare
Atu3569 +0.3 1.2 hypothetical protein compare
Atu8196 +0.3 1.6 hypothetical protein compare
Atu8169 +0.3 1.3 hypothetical protein compare
Atu0063 +0.3 1.5 ABC transporter, substrate binding protein (sugar) compare
Atu3468 +0.3 0.3 hypothetical protein compare
Atu8163 +0.3 1.7 hypothetical protein compare
Atu3067 +0.3 1.6 hypothetical protein compare
Atu0630 +0.3 0.9 hypothetical protein compare
Atu0662 +0.3 1.9 transcriptional regulator, GntR family compare
Atu1971 +0.3 1.6 hypothetical protein compare
Atu3182 +0.3 1.2 hypothetical protein compare
Atu4606 +0.3 2.2 hypothetical protein compare
Atu4237 +0.3 1.0 hypothetical protein compare
Atu1864 +0.3 1.2 putative homoserine/homoserine lactone efflux protein compare
Atu0340 +0.3 0.5 SAM dependent methyltransferase compare
Atu4489 +0.3 2.0 outer membrane lipoprotein compare
Atu3052 +0.3 1.6 MarR family transcriptional regulator compare
Atu5146 +0.3 0.8 hypothetical protein compare
Atu3254 +0.3 2.2 dicarboxylate ABC transporter ATPase compare
Atu0253 +0.3 1.8 hypothetical protein compare
Atu3153 +0.3 1.7 AraC family transcriptional regulator compare
Atu1608 +0.3 1.9 hypothetical protein compare
Atu8082 +0.3 0.6 hypothetical protein compare
Atu3667 +0.3 1.5 aspartate alpha-decarboxylase compare
Atu0786 +0.3 1.3 peptidase, family M16 compare
Atu8041 +0.3 0.9 hypothetical protein compare
Atu3410 +0.3 1.5 ABC transporter permease compare
Atu4144 +0.3 0.4 hypothetical protein compare
Atu8156 +0.3 1.6 hypothetical protein compare
Atu1550 +0.3 1.7 polypeptide deformylase compare
Atu3451 +0.3 1.6 monooxygenase compare
Atu5512 +0.3 1.0 hypothetical protein compare
Atu2464 +0.3 1.0 formyltetrahydrofolate deformylase compare
Atu2574 +0.3 1.4 hypothetical protein compare
Atu2732 +0.3 1.7 hippurate hydrolase compare
Atu0693 +0.3 1.5 PmbA/TldD related protein compare
Atu0435 +0.3 0.4 tRNA-Gly compare
Atu5171 +0.3 1.8 type IV secretion protein AvhB10 compare
Atu4352 +0.3 1.2 hypothetical protein compare
Atu3467 +0.3 1.1 hypothetical protein compare
Atu2282 +0.3 1.2 thymidine kinase compare
Atu0107 +0.3 1.2 hypothetical protein compare
Atu5169 +0.3 1.2 type IV secretion protein AvhB8 compare
Atu2444 +0.3 1.6 hypothetical protein compare
Atu2676 +0.3 1.7 4a-hydroxytetrahydrobiopterin dehydratase compare
Atu8035 +0.3 0.8 hypothetical protein compare
Atu1492 +0.3 1.5 transcriptional regulator, ArsR family compare
Atu4516 +0.3 2.1 branched chain amino acid ABC transporter ATPase compare
Atu3632 +0.3 0.6 hypothetical protein compare
Atu3286 +0.3 1.1 ABC transporter permease compare
Atu0862 +0.3 1.3 hypothetical protein compare
Atu5162 +0.3 1.5 type IV secretion protein AvhB1 compare
Atu0471 +0.3 1.3 hypothetical protein compare
Atu0777 +0.3 0.4 hypothetical protein compare
Atu1346 +0.3 1.5 phenazine antibiotic biosynthesis related protein compare
Atu1482 +0.3 1.6 hypothetical protein compare
Atu5534 +0.3 1.9 ABC transporter nucleotide binding/ATPase compare
Atu4819 +0.3 1.4 hypothetical protein compare
Atu5494 +0.3 1.4 hypothetical protein compare
Atu1994 +0.3 1.2 acyl-CoA hydrolase compare
Atu0468 +0.3 1.6 hypothetical protein compare
Atu1888 +0.3 2.1 two component sensor kinase compare
Atu0750 +0.3 2.0 ABC transporter, membrane spanning protein compare
Atu0284 +0.3 1.7 tryptophan-rich sensory protein compare
Atu2378 +0.3 1.0 hypothetical protein compare
Atu1875 +0.3 1.7 carbohydrate kinase compare
Atu1859 +0.3 1.2 glutaminase A compare
Atu2153 +0.3 1.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu4540 +0.3 1.0 protocatechuate 3,4-dioxygenase subunit beta compare
Atu2522 +0.3 1.9 agrobacterium chromosomal virulence protein B compare
Atu0230 +0.3 0.7 hypothetical protein compare
Atu4653 +0.3 1.9 sugar ABC transporter permease compare
Atu1865 +0.3 1.6 hypothetical protein compare
Atu3692 +0.3 1.4 sigma factor compare
Atu3750 +0.3 0.7 thiamine-phosphate pyrophosphorylase compare
Atu6107 +0.3 1.5 hypothetical protein compare
Atu8121 +0.3 1.7 hypothetical protein compare
Atu4437 +0.3 1.5 LysR family transcriptional regulator compare
Atu2634 +0.3 0.9 hypothetical protein compare
Atu8039 +0.3 0.9 hypothetical protein compare
Atu0234 +0.3 1.7 conserved hypothetical protein, membrane protein compare
Atu3448 +0.3 1.2 dibenzothiophene desulfurization protein B compare
Atu3598 +0.3 0.6 thiol:disulfide interchange protein compare
Atu1587 +0.3 1.4 hypothetical protein compare
Atu5145 +0.3 1.1 acetyltransferase compare
Atu5034 +0.3 0.8 hypothetical protein compare
Atu3031 +0.3 0.5 hypothetical protein compare
Atu2164 +0.3 1.4 hypothetical protein compare
Atu5486 +0.3 1.2 hypothetical protein compare
Atu8054 +0.2 0.4 hypothetical protein compare
Atu3032 +0.2 0.6 hypothetical protein compare
Atu4137 +0.2 0.7 hypothetical protein compare
Atu5538 +0.2 1.6 hypothetical protein compare
Atu2200 +0.2 0.6 cold shock protein compare
Atu2135 +0.2 1.3 transcriptional regulator, TetR family compare
Atu1973 +0.2 0.9 hypothetical protein compare
Atu1155 +0.2 1.9 hypothetical protein compare
Atu4202 +0.2 1.8 methyltransferase compare
Atu3827 +0.2 1.3 LysR family transcriptional regulator compare
Atu1062 +0.2 0.6 phosphatidylserine synthase compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source D-glutamine in Agrobacterium fabrum C58

For carbon source D-glutamine across organisms