Experiment set10IT005 for Pseudomonas putida KT2440

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L-Alanine carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PP_5271 -2.9 -6.8 DNA-binding transcriptional dual regulator, leucine-binding conserved
PP_5270 -2.5 -5.1 D-amino-acid:quinone oxidoreductase (deaminating) conserved
PP_0879 -2.2 -5.9 dipeptide ABC transporter - putative ATP binding subunit compare
PP_0878 -2.2 -6.6 dipeptide ABC transporter, binding subunit compare
PP_1137 -2.2 -6.2 high-affinity branched-chain amino acid transporter, ATP binding compare
PP_1139 -2.0 -9.3 branched chain amino acid transporter - permease subunit conserved
PP_0881 -1.9 -5.3 dipeptide ABC transporter - putative membrane subunit compare
PP_4866 -1.7 -7.3 High-affinity branched-chain amino acid transport system permease protein BraD conserved
PP_4864 -1.6 -8.2 High-affinity branched-chain amino acid transport ATP-binding protein BraF conserved
PP_4865 -1.6 -7.2 High-affinity branched-chain amino acid transport system permease protein BraE compare
PP_1140 -1.6 -8.2 branched chain amino acid transporter - permease subunit compare
PP_4863 -1.5 -7.3 high-affinity branched-chain amino acid transporter, ATP-binding compare
PP_1059 -1.2 -5.5 Uncharacterized amino acid permease YtnA conserved
PP_4867 -1.2 -5.7 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) compare
PP_1298 -1.1 -5.2 putative amino acid ABC transporter - permease subunit conserved
PP_4923 -1.0 -5.2 Outer membrane efflux protein compare
PP_4483 +1.2 8.2 histidine lysine / arginine / ornithine ABC transporter - ATP binding subunit compare
PP_4622 +1.3 6.3 Hmg transcriptional repressor compare
PP_1522 +1.3 6.8 major cold shock protein compare
PP_4896 +1.4 6.9 DNA mismatch repair protein MutL compare
PP_0659 +1.4 5.0 Cystathionine gamma-synthase compare
PP_4173 +1.5 8.5 Sensor histidine kinase/response regulator compare
PP_0697 +1.5 8.8 ribosomal-protein-S18-alanine N-acetyltransferase compare
PP_4486 +1.5 9.7 lysine / arginine / ornithine ABC transporter - periplasmic binding protein compare
PP_4485 +1.9 13.0 histidine / lysine / arginine / ornithine ABC transporter - permease subunit compare
PP_4484 +1.9 15.3 histidine / lysine / arginine / ornithine ABC transporter - permease subunit compare
PP_2389 +2.2 13.0 conserved protein of unknown function compare
PP_4406 +2.5 5.2 conserved protein of unknown function compare
PP_4776 +3.3 24.4 AsnC family transcriptional regulator compare
PP_1313 +3.4 28.4 Transcriptional regulator, AraC family compare
PP_0495 +3.5 20.3 type 1 L-asparaginase compare
PP_2908 +4.1 18.1 DNA-binding transcriptional repressor compare
PP_4947 +8.4 79.4 proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase compare


Specific phenotypes for carbon source L-Alanine across organisms