| | gene | name | fitness | t score | description | |
|---|
| b1412 | azoR | -4.7 | -3.3 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b4062 | soxS | -4.6 | -4.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0462 | acrB | -4.5 | -6.9 | multidrug efflux system protein (NCBI) | compare |
| b0463 | acrA | -4.4 | -5.3 | multidrug efflux system (NCBI) | compare |
| b1679 | sufE | -4.4 | -3.0 | cysteine desufuration protein SufE (NCBI) | compare |
| b4063 | soxR | -4.3 | -5.2 | DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing (NCBI) | compare |
| b2617 | smpA | -4.2 | -2.9 | small membrane protein A (VIMSS) | compare |
| b1426 | ydcH | -3.9 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1683 | ynhE | -3.9 | -6.5 | orf, hypothetical protein (VIMSS) | compare |
| b1682 | sufC | -3.9 | -3.8 | cysteine desulfurase ATPase component (NCBI) | compare |
| b3908 | sodA | -3.4 | -6.5 | superoxide dismutase, manganese (VIMSS) | compare |
| b1681 | sufD | -3.4 | -5.1 | component of SufBCD complex (NCBI) | compare |
| b3035 | tolC | -3.3 | -2.3 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3844 | fre | -3.3 | -3.2 | NAD(P)H-flavin reductase (NCBI) | compare |
| b2790 | yqcA | -3.2 | -4.3 | flavodoxin (NCBI) | compare |
| b1680 | sufS | -3.2 | -4.8 | selenocysteine lyase (NCBI) | compare |
| b1907 | tyrP | -3.1 | -2.1 | tyrosine transporter (NCBI) | compare |
| b3414 | gntY | -3.1 | -2.1 | predicted gluconate transport associated protein (NCBI) | compare |
| b4546 | ypeB | -3.0 | -1.7 | hypothetical protein (NCBI) | compare |
| b1961 | dcm | -2.9 | -2.0 | DNA cytosine methylase (NCBI) | compare |
| b1855 | lpxM | -2.8 | -3.9 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b3924 | fpr | -2.8 | -6.5 | ferredoxin-NADP reductase (NCBI) | compare |
| b4408 | csrB | -2.8 | -3.3 | CsrA-binding sRNA, antagonizing CsrA regulation (NCBI) | compare |
| b1677 | lpp | -2.7 | -1.8 | murein lipoprotein (NCBI) | compare |
| b3163 | nlpI | -2.6 | -2.6 | hypothetical protein (NCBI) | compare |
| b2494 | yfgC | -2.6 | -6.1 | predicted peptidase (NCBI) | compare |
| b3764 | yifE | -2.6 | -4.6 | hypothetical protein (NCBI) | compare |
| b0015 | dnaJ | -2.5 | -6.1 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b3032 | cpdA | -2.5 | -6.3 | cyclic 3',5'-adenosine monophosphate phosphodiesterase (NCBI) | compare |
| b2501 | ppk | -2.5 | -5.8 | polyphosphate kinase (NCBI) | compare |
| b2512 | yfgL | -2.4 | -3.7 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b0429 | cyoD | -2.4 | -4.0 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b4551 | yheV | -2.3 | -2.8 | hypothetical protein (NCBI) | compare |
| b3149 | yraO | -2.3 | -5.6 | DnaA initiator-associating factor for replication initiation (NCBI) | compare |
| b1518 | lsrG | -2.3 | -1.4 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b1231 | tyrT | -2.3 | -1.3 | tRNA-Tyr (NCBI) | compare |
| b2436 | hemF | -2.3 | -4.5 | coproporphyrinogen III oxidase (NCBI) | compare |
| b4410 | ecnA | -2.2 | -1.8 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b1446 | ydcY | -2.2 | -2.1 | hypothetical protein (NCBI) | compare |
| b3792 | wzxE | -2.1 | -2.1 | O-antigen translocase (NCBI) | compare |
| b0431 | cyoB | -2.1 | -7.9 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b3617 | kbl | -2.1 | -4.8 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b2281 | nuoI | -2.1 | -1.4 | NADH dehydrogenase subunit I (NCBI) | compare |
| b4480 | hdfR | -2.1 | -4.6 | transcriptional regulator HdfR (NCBI) | compare |
| b4603 | rseX | -2.0 | -1.1 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b0243 | proA | -2.0 | -6.4 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b0406 | tgt | -2.0 | -4.0 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b1685 | ydiH | -2.0 | -1.5 | predicted protein (RefSeq) | compare |
| b2531 | iscR | -2.0 | -1.3 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1108 | ycfP | -2.0 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b1438 | ydcQ | -2.0 | -2.6 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b3961 | oxyR | -2.0 | -8.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2142 | yohK | -1.9 | -4.8 | predicted inner membrane protein (NCBI) | compare |
| b1524 | yneH | -1.9 | -1.0 | predicted glutaminase (NCBI) | compare |
| b4000 | hupA | -1.9 | -3.8 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b0122 | yacC | -1.9 | -4.2 | orf, hypothetical protein (VIMSS) | compare |
| b2906 | visC | -1.9 | -3.6 | hypothetical protein (NCBI) | compare |
| b1830 | prc | -1.9 | -1.8 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b2450 | yffS | -1.9 | -1.7 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1767 | ansA | -1.9 | -4.3 | cytoplasmic asparaginase I (NCBI) | compare |
| b0428 | cyoE | -1.9 | -5.1 | protoheme IX farnesyltransferase (NCBI) | compare |
| b2051 | wcaH | -1.9 | -1.8 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b2426 | ucpA | -1.9 | -2.0 | putative oxidoreductase (VIMSS) | compare |
| b1192 | ldcA | -1.8 | -3.9 | L,D-carboxypeptidase A (NCBI) | compare |
| b2814 | metZ | -1.8 | -1.4 | tRNA-Met (NCBI) | compare |
| b1361 | ydaW | -1.8 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0432 | cyoA | -1.8 | -7.8 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b3181 | greA | -1.8 | -3.1 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b3199 | yrbK | -1.8 | -2.1 | hypothetical protein (NCBI) | compare |
| b1293 | sapB | -1.8 | -1.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2017 | yefM | -1.7 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0178 | hlpA | -1.7 | -3.2 | periplasmic chaperone (NCBI) | compare |
| b1823 | cspC | -1.7 | -1.2 | stress protein, member of the CspA-family (NCBI) | compare |
| b0145 | dksA | -1.7 | -1.6 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0685 | ybfE | -1.7 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1839 | yebY | -1.7 | -2.3 | hypothetical protein (NCBI) | compare |
| b3742 | mioC | -1.7 | -3.9 | flavodoxin (NCBI) | compare |
| b0990 | cspG | -1.7 | -1.1 | DNA-binding transcriptional regulator (NCBI) | compare |
| b2571 | rseB | -1.7 | -4.5 | periplasmic negative regulator of sigmaE (NCBI) | compare |
| b3884 | yihW | -1.7 | -4.6 | putative DEOR-type transcriptional regulator (VIMSS) | compare |
| b2424 | cysU | -1.6 | -2.0 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b0998 | torD | -1.6 | -1.2 | chaperone protein TorD (NCBI) | compare |
| b1871 | yecP | -1.6 | -3.2 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b2423 | cysW | -1.6 | -3.8 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b0028 | fkpB | -1.6 | -4.0 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (NCBI) | compare |
| b2113 | mrp | -1.6 | -3.9 | putative ATPase (VIMSS) | compare |
| b4208 | cycA | -1.6 | -6.5 | D-alanine/D-serine/glycine transporter (NCBI) | compare |
| b1480 | sra | -1.5 | -1.0 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b4505 | insX | -1.5 | -1.4 | predicted IS protein (RefSeq) | compare |
| b0053 | surA | -1.5 | -1.8 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0427 | yajR | -1.5 | -6.5 | putative transport protein (VIMSS) | compare |
| b0014 | dnaK | -1.5 | -1.0 | molecular chaperone DnaK (NCBI) | compare |
| b2457 | cchA | -1.5 | -2.8 | detox protein (VIMSS) | compare |
| b0430 | cyoC | -1.4 | -3.0 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b1753 | ynjA | -1.4 | -1.6 | hypothetical protein (NCBI) | compare |
| b1176 | minC | -1.4 | -1.9 | septum formation inhibitor (NCBI) | compare |
| b0222 | lpcA | -1.4 | -1.7 | phosphoheptose isomerase (NCBI) | compare |
| b0237 | pepD | -1.4 | -4.5 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b1323 | tyrR | -1.4 | -3.4 | DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) | compare |
| b3616 | tdh | -1.4 | -3.2 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b1857 | yebL | -1.4 | -3.7 | putative adhesin (VIMSS) | compare |
| b1126 | potA | -1.4 | -3.8 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b2314 | dedD | -1.4 | -2.6 | putative lipoprotein (VIMSS) | compare |
| b2392 | mntH | -1.4 | -4.0 | manganese transport protein MntH (NCBI) | compare |
| b1125 | potB | -1.4 | -2.6 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b2276 | nuoN | -1.4 | -3.3 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b0560 | nohB | -1.4 | -1.5 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b0723 | sdhA | -1.3 | -6.5 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b0720 | gltA | -1.3 | -4.0 | citrate synthase (NCBI) | compare |
| b1530 | marR | -1.3 | -4.6 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b2889 | idi | -1.3 | -3.5 | isopentenyl-diphosphate delta-isomerase (NCBI) | compare |
| b2209 | eco | -1.3 | -1.5 | ecotin precursor (NCBI) | compare |
| b1848 | yebG | -1.3 | -1.2 | conserved protein regulated by LexA (NCBI) | compare |
| b2808 | gcvA | -1.3 | -1.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1778 | yeaA | -1.3 | -1.7 | methionine sulfoxide reductase B (NCBI) | compare |
| b2284 | nuoF | -1.3 | -2.6 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b0957 | ompA | -1.3 | -2.3 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b1295 | ymjA | -1.3 | -1.5 | hypothetical protein (NCBI) | compare |
| b0688 | pgm | -1.3 | -1.5 | phosphoglucomutase (NCBI) | compare |
| b4701 | sokX | -1.3 | -0.8 | sok-related sRNA, function unknown (RefSeq) | compare |
| b3649 | rpoZ | -1.3 | -1.5 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b4139 | aspA | -1.3 | -5.2 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b2422 | cysA | -1.2 | -4.2 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b3465 | yhhF | -1.2 | -3.8 | predicted methyltransferase (NCBI) | compare |
| b4698 | mgrR | -1.2 | -2.0 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b0242 | proB | -1.2 | -2.1 | gamma-glutamyl kinase (NCBI) | compare |
| b1338 | ydaJ | -1.2 | -3.0 | putative aminohydrolase (EC 3.5.1.14) (VIMSS) | compare |
| b2553 | glnB | -1.2 | -2.7 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b0617 | citD | -1.2 | -1.8 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b0724 | sdhB | -1.2 | -3.8 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b2948 | yqgE | -1.2 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b0149 | mrcB | -1.2 | -6.6 | penicillin-binding protein 1b (NCBI) | compare |
| b4255 | yjgD | -1.2 | -2.8 | hypothetical protein (NCBI) | compare |
| b0471 | ybaB | -1.2 | -2.1 | hypothetical protein (NCBI) | compare |
| b0405 | queA | -1.2 | -3.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI) | compare |
| b1858 | znuC | -1.2 | -3.2 | high-affinity zinc transporter ATPase (NCBI) | compare |
| b1640 | ydhH | -1.2 | -1.9 | anhydro-N-acetylmuramic acid kinase (NCBI) | compare |
| b0386 | proC | -1.2 | -2.1 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b4260 | pepA | -1.2 | -5.9 | leucyl aminopeptidase (NCBI) | compare |
| b1476 | fdnI | -1.2 | -0.9 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b0866 | ybjQ | -1.2 | -1.1 | hypothetical protein (NCBI) | compare |
| b3890 | yiiF | -1.2 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1144 | ymfJ | -1.2 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b2248 | yfaX | -1.2 | -1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1642 | slyA | -1.2 | -1.3 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b3443 | yrhA | -1.2 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1084 | rne | -1.1 | -2.6 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b2425 | cysP | -1.1 | -4.1 | thiosulfate transporter subunit (NCBI) | compare |
| b2794 | yqcD | -1.1 | -3.8 | hypothetical protein (NCBI) | compare |
| b1055 | yceA | -1.1 | -3.7 | hypothetical protein (NCBI) | compare |
| b1085 | b1085 | -1.1 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1628 | rsxB | -1.1 | -1.8 | electron transport complex protein RnfB (NCBI) | compare |
| b1726 | yniB | -1.1 | -1.3 | predicted inner membrane protein (NCBI) | compare |
| b3745 | yieM | -1.1 | -8.1 | predicted von Willibrand factor containing protein (NCBI) | compare |
| b3075 | ebgR | -1.1 | -3.1 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2479 | gcvR | -1.1 | -2.4 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b2634 | yfjR | -1.1 | -2.4 | CP4-57 prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3973 | birA | -1.1 | -1.9 | biotin--protein ligase (NCBI) | compare |
| b1278 | pgpB | -1.1 | -1.6 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b2620 | smpB | -1.1 | -0.7 | SsrA-binding protein (NCBI) | compare |
| b1236 | galU | -1.1 | -1.5 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2133 | dld | -1.1 | -4.5 | D-lactate dehydrogenase, FAD-binding, NADH independent (NCBI) | compare |
| b1604 | ydgH | -1.1 | -3.2 | hypothetical protein (NCBI) | compare |
| b2579 | yfiD | -1.1 | -1.2 | pyruvate formate lyase subunit (NCBI) | compare |
| b2572 | rseA | -1.1 | -3.2 | anti-sigma factor (NCBI) | compare |
| b1429 | tehA | -1.1 | -0.7 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1658 | purR | -1.1 | -2.8 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b1567 | intK | -1.1 | -1.1 | Qin prophage; predicted protein (RefSeq) | compare |
| b4594 | ymgJ | -1.1 | -1.0 | hypothetical protein (RefSeq) | compare |
| b0092 | ddlB | -1.0 | -3.0 | D-alanylalanine synthetase (NCBI) | compare |
| b0877 | ybjX | -1.0 | -4.1 | hypothetical protein (NCBI) | compare |
| b4203 | rplI | -1.0 | -2.2 | 50S ribosomal protein L9 (NCBI) | compare |
| b1442 | ydcU | -1.0 | -2.7 | predicted spermidine/putrescine transporter subunit (NCBI) | compare |
| b1124 | potC | -1.0 | -2.9 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b1731 | cedA | -1.0 | -1.5 | cell division modulator (RefSeq) | compare |
| b4614 | sokA | -1.0 | -1.5 | no description | compare |
| b3281 | aroE | -1.0 | -6.6 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b1724 | ydiZ | -1.0 | -1.5 | hypothetical protein (NCBI) | compare |
| b3609 | secB | -1.0 | -2.5 | export protein SecB (NCBI) | compare |
| b2141 | yohJ | -1.0 | -1.7 | hypothetical protein (NCBI) | compare |
| b4557 | yidD | -1.0 | -1.8 | hypothetical protein (NCBI) | compare |
| b1101 | ptsG | -1.0 | -5.2 | fused glucose-specific PTS enzymes: IIB component/IIC component (NCBI) | compare |
| b3761 | trpT | -1.0 | -1.1 | tRNA-Trp (NCBI) | compare |
| b1853 | yebK | -1.0 | -1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1114 | mfd | -1.0 | -3.9 | transcription-repair coupling factor (NCBI) | compare |
| b4613 | dinQ | -1.0 | -1.3 | Damage inducible, function unknown (RefSeq) | compare |
| b2804 | fucU | -1.0 | -1.6 | L-fucose mutarotase (NCBI) | compare |
| b2642 | yfjW | -1.0 | -0.7 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1317 | ycjU | -1.0 | -2.3 | predicted beta-phosphoglucomutase (NCBI) | compare |
| b1954 | dsrA | -1.0 | -1.5 | regulatory antisense RNA (NCBI) | compare |
| b0081 | mraZ | -1.0 | -3.2 | hypothetical protein (NCBI) | compare |
| b0737 | tolQ | -1.0 | -0.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1765 | ydjA | -1.0 | -0.8 | predicted oxidoreductase (NCBI) | compare |
| b3752 | rbsK | -1.0 | -5.1 | ribokinase (NCBI) | compare |
| b1693 | aroD | -1.0 | -2.5 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b2168 | fruK | -1.0 | -0.6 | 1-phosphofructokinase (NCBI) | compare |
| b1175 | minD | -1.0 | -2.3 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b0506 | allR | -1.0 | -2.1 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1337 | abgB | -1.0 | -1.8 | predicted peptidase, aminobenzoyl-glutamate utilization protein (NCBI) | compare |
| b2282 | nuoH | -1.0 | -1.4 | NADH dehydrogenase subunit H (NCBI) | compare |