Protein Info for RPSI07_RS00695 in Ralstonia solanacearum PSI07

Annotation: AMP nucleosidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 493 TIGR01717: AMP nucleosidase" amino acids 24 to 493 (470 residues), 649 bits, see alignment E=2.4e-199 PF10423: AMNp_N" amino acids 25 to 176 (152 residues), 156.8 bits, see alignment E=3.7e-50 PF01048: PNP_UDP_1" amino acids 277 to 440 (164 residues), 68.5 bits, see alignment E=5.8e-23

Best Hits

KEGG orthology group: K01241, AMP nucleosidase [EC: 3.2.2.4] (inferred from 100% identity to rsl:RPSI07_mp0158)

Predicted SEED Role

"AMP nucleosidase (EC 3.2.2.4)" in subsystem Purine conversions (EC 3.2.2.4)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.2.4

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (493 amino acids)

>RPSI07_RS00695 AMP nucleosidase (Ralstonia solanacearum PSI07)
MTDTRASAHLYPAHDLAVCTDASTAVERITAIYERSAQTIRERFHAFARGEDLDDDAPAC
YPYLGITVDPKTLVSDARPSWGTVAYPGVYGTTLTRPDLFREYYRVQIERLLHYHNSPVV
VGVSNRPIPLPFVVEASTIDITPEQARALGGAFPLPDLAQIDDAIANGTYRPADNEPQPL
SMFTAERVDLALQRLYHYTATHPKHFQRFVLFTNYQRYVDEFAALGRKLMEEGNDEGYVR
FVEPGDTVHELGTPAPDDSHRIKGLPQMPAYHLVRADRLGVTLVNIGVGPSNAKTITDHL
AVLRPHCWMMIGHCGGLRRSQQLGDYVLAHAYVRDDHVLDQDLPPWVPVPPIAEIQVALQ
EAVARITGLSGSDMKARMRTGTVVSTDDRNWELKYQALYTRFNQSRAIAIDMESATIAAN
GFRLRVPYGTLLCVSDKPLHGELKLRGMANLFYRQRVSQHLAIGMETVRLLRENGVEALH
SRKLRSFDEPAFR