Protein Info for QEN71_RS42090 in Paraburkholderia sabiae LMG 24235

Annotation: adenylyl-sulfate kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 199 transmembrane" amino acids 94 to 113 (20 residues), see Phobius details TIGR00455: adenylyl-sulfate kinase" amino acids 17 to 195 (179 residues), 225.8 bits, see alignment E=1.7e-71 PF01583: APS_kinase" amino acids 30 to 180 (151 residues), 214.9 bits, see alignment E=2.9e-68

Best Hits

Swiss-Prot: 51% identical to CYSC_VIBPA: Adenylyl-sulfate kinase (cysC) from Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)

KEGG orthology group: K00860, adenylylsulfate kinase [EC: 2.7.1.25] (inferred from 96% identity to bph:Bphy_7714)

Predicted SEED Role

"Adenylylsulfate kinase (EC 2.7.1.25)" in subsystem Cysteine Biosynthesis or O-Methyl Phosphoramidate Capsule Modification in Campylobacter (EC 2.7.1.25)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.1.25

Use Curated BLAST to search for 2.7.1.25

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (199 amino acids)

>QEN71_RS42090 adenylyl-sulfate kinase (Paraburkholderia sabiae LMG 24235)
MTNETSTSHLYAHDFRIDPESRRRLLRQTPAILWFTGLSGSGKSAIADRVEARLHASGRL
TYTLDGDAVRLGLCKDLGFSDEDRHENVRRVSEVAKLMADAGIVVLVCLISPFRSDRELA
KSNAGKHNFAEVHVHASLAVAEARDPKGLYRLARRGAIQHFTGVDSPYEQPTAPDVFIDT
CLLSINEGVEIVLNWLDRR