Protein Info for QEN71_RS41330 in Paraburkholderia sabiae LMG 24235

Annotation: alpha/beta hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 259 PF00561: Abhydrolase_1" amino acids 19 to 240 (222 residues), 86.9 bits, see alignment E=3.5e-28 PF12146: Hydrolase_4" amino acids 20 to 227 (208 residues), 34.4 bits, see alignment E=3e-12 PF12697: Abhydrolase_6" amino acids 21 to 242 (222 residues), 57.8 bits, see alignment E=5.2e-19 PF03959: FSH1" amino acids 163 to 244 (82 residues), 24.1 bits, see alignment E=5.2e-09

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (259 amino acids)

>QEN71_RS41330 alpha/beta hydrolase (Paraburkholderia sabiae LMG 24235)
MKSFVTNAGVAGAAAGSGPAILMISGLGGRGSFWHQVMETLCPIYRTVTFDHPGVGASKC
VGEQSISNVVDAALDVLDSLDIDHATIVGHSTGSLVAQAIALEFPRRCDQLVLSGGWARP
DRRFRDCFLLRKEVLSKAGSAAYGMLSALLAYPNEWYNSAIAGPSMPAFDGGLDTDAATV
RDRIDMLLQYSRFDELPNLDMQTLVIGARDDMVVPIEHSRELASLIPGSTLVEMNGGHFF
PNVATVEYTRYLLEFVGKP