Protein Info for QEN71_RS39615 in Paraburkholderia sabiae LMG 24235

Annotation: glycine betaine/L-proline ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR01186: glycine betaine/L-proline transport ATP binding subunit
  • amino acids 40 to 342 (303 residues), 336.5 bits, E=1e-104
• PF00005: ABC_tran
  • amino acids 48 to 196 (149 residues), 111.4 bits, E=5.7e-36

Best Hits

KEGG orthology group: K02000, glycine betaine/proline transport system ATP-binding protein [EC: 3.6.3.32] (inferred from 77% identity to rlt:Rleg2_4908)

Predicted SEED Role

"L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)" in subsystem Choline and Betaine Uptake and Betaine Biosynthesis (TC 3.A.1.12.1)

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.32

Use Curated BLAST to search for 3.6.3.32

Protein Sequence (375 amino acids)

>QEN71_RS39615 glycine betaine/L-proline ABC transporter ATP-binding protein (Paraburkholderia sabiae LMG 24235)
MADIQSGGIRIQHLYKIFGPKAASYVEAVKNGLSKAELLKETGHVLGLRDINLDIPAGSI
QVIMGLSGSGKSTLIRHINRLIDPTAGEVLIGGVDVCKMGFRGLREFRRRQTAMVFQKFA
LLPHRNVLDNVIYGLEICGVKRHAAVETAMRWIERVGLKGFEQRFPNQLSGGMQQRVGLA
RALAMDAPVLLMDEAYSALDPLIRMDMQTVLLDLQKEIRKTIVFITHDLDEALRLGDQIA
ILRDGCIVQQGTKQDIVLRPADEYVTNFVKQVNRGRVVCVESVMTPLRAGVASAGNHVVA
GTTIEEAISMLTHNPAIEQLTVVGAEKQPLGSVSLRQLACALITSDERCDAIRVPAEARI
RTEALPGVSLTPLER