Protein Info for QEN71_RS39575 in Paraburkholderia sabiae LMG 24235

Annotation: FAD-dependent oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 508 PF00355: Rieske" amino acids 29 to 98 (70 residues), 47.7 bits, see alignment E=4.8e-16 PF07992: Pyr_redox_2" amino acids 129 to 422 (294 residues), 228.9 bits, see alignment E=3.8e-71 PF00070: Pyr_redox" amino acids 271 to 343 (73 residues), 59.3 bits, see alignment E=1.8e-19 PF14759: Reductase_C" amino acids 441 to 492 (52 residues), 30 bits, see alignment 2.5e-10

Best Hits

KEGG orthology group: None (inferred from 66% identity to bja:blr2983)

Predicted SEED Role

"Ferredoxin reductase" in subsystem Anaerobic respiratory reductases

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (508 amino acids)

>QEN71_RS39575 FAD-dependent oxidoreductase (Paraburkholderia sabiae LMG 24235)
MSSDATNENGPDLTQGVAIESFGDSGLQAGHVGDDRVMIARVGDEFLAVDAACTHYHGPL
DEGLIVGDTVRCPWHHACFSLRTGAALRAPGLSPVGCWSTAVRDGKVFVLQRLAPSSGSI
EVPGQAPQKIVIVGGGAAGFAAAERLRQLGYAGNLTMLSDDDAAPVDRPNLSKDYLAGSA
PEDWLPLRDSAFYADQRIDLRLKVSVVRIHTATQEVELSDGSKVPYDRLLLATGAEPVRL
PIPGMDLPHVHTLRSLADSRAIIAGAANARRVVVVGASFIGLEVAASLRTRGLEVHVVAP
DRRPMERVLGPEMGDFVRQLHEEHGVVFHLENTISAIDANGVSLKAGGRVDADLVVVGAG
VRPRLALAEQAGLAIDRGVTVDAYLQTSVPGIFAAGDIARWPDPHSGAAIRAEHWVVAQR
QGQTAAMNMIGGREKFDAVPFFWSQHYDVPINYVGHAESWDAISVDGSIEGRDCVLRYLR
DGRVLAVASIYRDIDSLRAEVEMESDSV