Protein Info for QEN71_RS38030 in Paraburkholderia sabiae LMG 24235

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 451 transmembrane" amino acids 24 to 48 (25 residues), see Phobius details amino acids 62 to 86 (25 residues), see Phobius details amino acids 94 to 113 (20 residues), see Phobius details amino acids 118 to 139 (22 residues), see Phobius details amino acids 160 to 184 (25 residues), see Phobius details amino acids 196 to 215 (20 residues), see Phobius details amino acids 257 to 277 (21 residues), see Phobius details amino acids 290 to 310 (21 residues), see Phobius details amino acids 322 to 341 (20 residues), see Phobius details amino acids 347 to 371 (25 residues), see Phobius details amino acids 382 to 404 (23 residues), see Phobius details amino acids 416 to 434 (19 residues), see Phobius details PF00083: Sugar_tr" amino acids 30 to 222 (193 residues), 98.1 bits, see alignment E=5.9e-32 amino acids 230 to 442 (213 residues), 57.2 bits, see alignment E=1.5e-19 PF07690: MFS_1" amino acids 65 to 392 (328 residues), 90.4 bits, see alignment E=1.1e-29 amino acids 280 to 442 (163 residues), 34.8 bits, see alignment E=9.3e-13

Best Hits

KEGG orthology group: None (inferred from 55% identity to gbe:GbCGDNIH1_2075)

Predicted SEED Role

"Alpha-ketoglutarate permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (451 amino acids)

>QEN71_RS38030 MFS transporter (Paraburkholderia sabiae LMG 24235)
MAATPHELTLRASPAARRERLRSIIGGSAGNVIEWYDFLAYSIFSIYFSKAFFPGGNQTA
QLLNAAAVAAIGYVVRPLGSWAIGALADRHGRRVALSVSVAMMSVGSLIIAVTPTYATIG
VAAPAVLIFARLLQGFSMGGEAGTSATYLSEMAPTGRRGFFVGFVQVTVVMGQLVALALM
LVLQRLALTPTQLEDWGWRIPFAIGGALAVFALYLRRGIAETDAFERADTVAATQASRES
ERGSVLALLIRHRMQTLWTIGISIGGTVAFYTFTIYLQKYMVNTTGFSRVTATTITTVAL
VIYMCFQPLYGLLSDVVGRRPVMLIFGLGGTFCTVPLMHALGSTHSVWAAFALNLAALGI
LSGFSSIHWLVKSELFPAKLRALGVGLPFAVVSSVMGGTTEYLALKFKHAGHESWFFYYV
SACAAISLVTYCLMPETRHRSVIDEEARAQN