Protein Info for QEN71_RS33800 in Paraburkholderia sabiae LMG 24235

Annotation: asparaginase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 372 signal peptide" amino acids 1 to 33 (33 residues), see Phobius details TIGR00520: L-asparaginase, type II" amino acids 30 to 369 (340 residues), 375.9 bits, see alignment E=8.6e-117 PF00710: Asparaginase" amino acids 47 to 236 (190 residues), 207.2 bits, see alignment E=1.7e-65 PF17763: Asparaginase_C" amino acids 257 to 368 (112 residues), 107 bits, see alignment E=5.8e-35

Best Hits

Swiss-Prot: 49% identical to ASPG_WOLSU: L-asparaginase (ansA) from Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W)

KEGG orthology group: K01424, L-asparaginase [EC: 3.5.1.1] (inferred from 72% identity to bge:BC1002_6680)

Predicted SEED Role

"L-asparaginase (EC 3.5.1.1)" in subsystem Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis (EC 3.5.1.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.5.1.1

Use Curated BLAST to search for 3.5.1.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (372 amino acids)

>QEN71_RS33800 asparaginase (Paraburkholderia sabiae LMG 24235)
MPRLVTSSCLTVSALLIAACIALPLCSTAAQAADTATTSNSRQSLPRVIVLATGGTISGT
ADARSAIGYNSGERTGKQLIKDVPDIGKFATISAEQISNVGSQDMSDGIWFQLAKRIDEI
FARGEAEGVVITHGTDTMEETAFFLKNVLHSRQPVVLVGSMRPGGVVGADGPNNLLEAVE
VAASPQSKGRGVMVVMNDTIHDPRWITKTNTTSVQTFMSPNAGPIGYVDPASVRYVAPAT
EARPSGFTLPAAGQLPRVDIVYAHSNMDASQIDHAVADNAKGIIVAGVGDGDVSKAALSA
MERAAKMGIVVVRASRVGTGFVNRNVEIDDDKSGFVASLDLNPQKARLLTQLLIANGVTT
PAKVQDAFSTTY