Protein Info for QEN71_RS33170 in Paraburkholderia sabiae LMG 24235

Annotation: elongation factor G

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 681 PF00009: GTP_EFTU" amino acids 7 to 259 (253 residues), 115.9 bits, see alignment E=4.4e-37 PF01926: MMR_HSR1" amino acids 10 to 133 (124 residues), 22.6 bits, see alignment E=2.4e-08 PF14492: EFG_III" amino acids 386 to 458 (73 residues), 67.6 bits, see alignment E=2.1e-22 PF03764: EFG_IV" amino acids 461 to 580 (120 residues), 137.5 bits, see alignment E=5e-44 PF00679: EFG_C" amino acids 583 to 669 (87 residues), 86.3 bits, see alignment E=3e-28

Best Hits

KEGG orthology group: K02355, elongation factor G (inferred from 96% identity to bph:Bphy_6425)

Predicted SEED Role

"Translation elongation factor G-related protein" in subsystem Translation elongation factor G family

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (681 amino acids)

>QEN71_RS33170 elongation factor G (Paraburkholderia sabiae LMG 24235)
MDYPPEAIRTIALVGHAGCGKTSLIEALLKEGGAIHAAGSVDRGSTVCDFDPLERKYHHS
LTSAIAHLHYQNTRIYLADTPGYPDFSGLSISALPAVETAAIVVNARTGIEMTTRRMMAW
AEARKLCRIIVVNDIDGEKVDLSRLLEDIQETFGKNCLPINLPAQDAHAVVDCFFNPSGE
SDLMSVESAHDALVDQVIELDAKLMELYLEQGEAIKPEQLHEPFEKALREGHLVPVCFAS
AATGAGIQELLDVFVKLLPNPLEGNPPLFYRDVDGRRETVQAEPDPDKHVLAHVFKIVID
PYIGKMAVFRIHQGTVRRDSQLYIGDARQPFRVAHLMLLQGKDHEEVLQAGPGDICATAK
VDEISFDAVLHDAPEDGNIHLAPLAFPTPIYGLAIEPERRGNEQRLWEILQKLAAEDPCL
KIEHPVGTNETVVRGLGELHLRHMLERLTDQYKLGVITRPPKIAYRETIGGKAEGHHRHK
KQTGGAGQFGEVMLRVEPLPRGAGYEFVDAVKGGAIPGQFMPAVEKGILQVIENGPLAGF
PMQDVRITVFDGKSHPVDSKEVAFVTAGRKAFIDAVLKAQPILLEPIVNIEVMTPETTMG
DIIGDLSSRRAQVQGTRNLAGHAVVVAGKVPLSELADYQSRLNAIAGGHGNYNIELSHYD
PVPPNQQDKLASQYKKQADAD