Protein Info for QEN71_RS28515 in Paraburkholderia sabiae LMG 24235

Annotation: Mut7-C RNAse domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 251 PF14451: Ub-Mut7C" amino acids 1 to 81 (81 residues), 124.6 bits, see alignment E=1.7e-40 PF02597: ThiS" amino acids 28 to 73 (46 residues), 23.8 bits, see alignment 8.2e-09 PF01927: Mut7-C" amino acids 97 to 239 (143 residues), 183.8 bits, see alignment E=3e-58

Best Hits

KEGG orthology group: K09122, hypothetical protein (inferred from 95% identity to bph:Bphy_2878)

Predicted SEED Role

"FIG00455878: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (251 amino acids)

>QEN71_RS28515 Mut7-C RNAse domain-containing protein (Paraburkholderia sabiae LMG 24235)
MVTATFRFYEELNDFLARPLRRQSFSYECARSASAKHMIEALGVPHTEVELILVNGESVG
FDHQLQEGDRVAVYPKFETLDIQPVLRVRERPLRVVRFVADAHLGGLAQLLRLAGFDTLY
DNHYADSHIESIASDEDRIVLTRDRELLKRRSITHGCYVRALKPEAQLREMFDRLDLARS
ARPFRLCLTCNVPLRRIAKDEAIGRAPEGVLERHSQFVTCDVCRRVFWEGSHWRRMRALM
DSVTGAPTPAK