Protein Info for QEN71_RS26485 in Paraburkholderia sabiae LMG 24235

Annotation: aminodeoxychorismate synthase component I

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 621 TIGR00553: aminodeoxychorismate synthase, component I" amino acids 71 to 402 (332 residues), 335.3 bits, see alignment E=2e-104 PF00425: Chorismate_bind" amino acids 127 to 398 (272 residues), 267.2 bits, see alignment E=1.6e-83 PF01063: Aminotran_4" amino acids 410 to 618 (209 residues), 134.4 bits, see alignment E=5.9e-43

Best Hits

KEGG orthology group: K03342, para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC: 2.6.1.85 4.1.3.38] (inferred from 92% identity to bph:Bphy_2495)

Predicted SEED Role

"Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) / Aminodeoxychorismate lyase (EC 4.1.3.38)" in subsystem Chorismate: Intermediate for synthesis of PAPA antibiotics, PABA, anthranilate, 3-hydroxyanthranilate and more. or Folate Biosynthesis (EC 2.6.1.85, EC 4.1.3.38)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.6.1.85

Use Curated BLAST to search for 2.6.1.85 or 4.1.3.38

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (621 amino acids)

>QEN71_RS26485 aminodeoxychorismate synthase component I (Paraburkholderia sabiae LMG 24235)
MAAQATGTVFALLDDCDSTASRRSSRLYTGFRHEHVCTDRAQLDAVCDAASADVDGGLFA
VVLADYEFGQALQQKTQRATGTLRFLLFERCQKMSRDEVDTWLALYDSAAVEPSVAGIGG
VHASVDERAFTQAIDAVHEALRAGDSYQINYTYRLYFDVFGTPAALFRRLRARQSVHYGA
LIALPGDRWVVSCSPELFVEKKGAALRTRPMKGTAPRSSNAEQDRAAAEFLSHDPKNRAE
NVMIVDLLRNDLSRIAETGTVKTPALFSVEPYQSVWQMTSTVTATLRPRTSFADILRALF
PCGSITGAPKHKTMQLIEQLESTPRGLYTGAIGWFDAKTDLGEAAGKQCGDFCLSVAIRT
LSLGAATSFGPRRGEMGIGAGIVLDSVAQDEYAECKLKARFLTEADPGFQLFETIYATRE
GGVRHLERHLARLGNSARWLGFGFDENSVRAQLVAQCAALRNDTPHRMRLTLDKAGATEI
TFAPLVPLTDEVVGVLLGPDHGFATTQAADPLLLHKTTRRANYDRGWREAESHDAFDTLF
FNERGELTEGGRSNVFVKLEGRWWTPPLESGVLPGVMRGVLLDDPDMQAGERVLTREEVM
NAEALMLCNALRGALPARIIA