Protein Info for QEN71_RS25795 in Paraburkholderia sabiae LMG 24235

Annotation: YqgE/AlgH family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 191 PF02622: DUF179" amino acids 19 to 178 (160 residues), 175.4 bits, see alignment E=4.3e-56

Best Hits

Swiss-Prot: 97% identical to Y2327_PARP8: UPF0301 protein Bphy_2327 (Bphy_2327) from Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)

KEGG orthology group: K07735, putative transcriptional regulator (inferred from 97% identity to bph:Bphy_2327)

Predicted SEED Role

"UPF0301 protein YqgE"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (191 amino acids)

>QEN71_RS25795 YqgE/AlgH family protein (Paraburkholderia sabiae LMG 24235)
MPKSNDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLQALFNR
IDLKLEIEPLLHVPVYFGGPVQTERGFVLHDASESSYTSSMQVPGGLEMTTSKDVLEAVA
SGKGPERFLLTLGHAGWGAGQLEDEISKNGWLTVQADPKIVFDVPAEDRFEAALALLGIS
SSMLSGEAGHA