Protein Info for QEN71_RS24605 in Paraburkholderia sabiae LMG 24235

Annotation: FUSC family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 392 transmembrane" amino acids 56 to 76 (21 residues), see Phobius details amino acids 82 to 98 (17 residues), see Phobius details amino acids 109 to 128 (20 residues), see Phobius details amino acids 136 to 168 (33 residues), see Phobius details amino acids 181 to 203 (23 residues), see Phobius details PF04632: FUSC" amino acids 57 to 380 (324 residues), 64.6 bits, see alignment E=7.5e-22 PF13515: FUSC_2" amino acids 71 to 196 (126 residues), 46.2 bits, see alignment E=4.9e-16

Best Hits

KEGG orthology group: None (inferred from 87% identity to bph:Bphy_2106)

Predicted SEED Role

"FIG028593: membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (392 amino acids)

>QEN71_RS24605 FUSC family protein (Paraburkholderia sabiae LMG 24235)
MALSDPQSDPPRKPHAGTPPGTKDAVAARLAPRRTRIGRLVRAVTSPYYRYRHAKFFHSL
RVGLAMIVSILATTGIDIPHGIWASVTLLVVIGGLQHHGNIRKKAAERAAGTLLGAALGL
SLILQQNLFDSLTLTYVLMSVIAAICAWFAIGSAGYVALLTAITMCIVAGHGDNMIDTGL
WRTLNVLVGIVIALAFSFALPLHATYSWRYLLADNLRECARIYTRMMTGVPFGSDEQVAA
FIRMGKRLVQLRSLMPSVAKEIDLPIAKLDQIQGLHRSMLSALEMLSTGTLAHPEMCDAF
AQQCGEQANAVRMTLLGAARALRFAGTTHFRMPDASSLFEPVTPEKETAPDLQGPLWLAQ
RFAEQVERMRSLLAATEANWNIEGGGAPAANR