Protein Info for QEN71_RS24455 in Paraburkholderia sabiae LMG 24235

Annotation: glycosyltransferase family 4 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 334 PF00534: Glycos_transf_1" amino acids 195 to 310 (116 residues), 68.5 bits, see alignment E=7.9e-23 PF13692: Glyco_trans_1_4" amino acids 195 to 289 (95 residues), 50.9 bits, see alignment E=3.2e-17 PF13524: Glyco_trans_1_2" amino acids 245 to 314 (70 residues), 49.1 bits, see alignment E=8.3e-17

Best Hits

KEGG orthology group: None (inferred from 91% identity to bph:Bphy_2076)

Predicted SEED Role

"glycosyl transferase, group 1 family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (334 amino acids)

>QEN71_RS24455 glycosyltransferase family 4 protein (Paraburkholderia sabiae LMG 24235)
MQPVTIQTEGMIHIFNGFHNPNGGSEREALSLYELLRGKSDVQLWSTSSRTSEELAAAYP
IRRVAPLKASVPRGGTYVFVGAHWRNRLWPYFAGRPERLVYVFNTFHPKLLALTSTQPPL
LRWPATEFVLISSFQAHLLGVKGEIQPSPIDISRFAPRVREPHAQPVIGRLSRDTADKHH
PDDIGVYKALAARGCKLLLQGATTLAGALPQGDAIRVLPEGAMAAPDFLHELDIFYYRTG
EHVETFGRVVLEAMACGLPVVCHRHGGYADVVRHGENGYLFDTSEEALAILDQLIGQPAL
RAQIGAAARRTVEQLYSREALDARTAFYLRDASR