Protein Info for QEN71_RS24300 in Paraburkholderia sabiae LMG 24235

Annotation: glycosyl transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 644 signal peptide" amino acids 1 to 37 (37 residues), see Phobius details transmembrane" amino acids 63 to 82 (20 residues), see Phobius details amino acids 145 to 164 (20 residues), see Phobius details amino acids 176 to 193 (18 residues), see Phobius details amino acids 202 to 222 (21 residues), see Phobius details amino acids 245 to 275 (31 residues), see Phobius details amino acids 287 to 308 (22 residues), see Phobius details amino acids 342 to 366 (25 residues), see Phobius details amino acids 378 to 396 (19 residues), see Phobius details amino acids 402 to 419 (18 residues), see Phobius details amino acids 431 to 451 (21 residues), see Phobius details amino acids 475 to 495 (21 residues), see Phobius details amino acids 507 to 529 (23 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 83% identity to bph:Bphy_2033)

Predicted SEED Role

"Probable transmembrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (644 amino acids)

>QEN71_RS24300 glycosyl transferase (Paraburkholderia sabiae LMG 24235)
MQQQNPSKRWRWGATALSALARFIAGPAAPSHPAQGTGADTATPLPPAPATQRLTRRLAA
SRAARWVIGIALVCAWLLPGTLGHDPWKQDETYTFGIVQHMLDTGDLVVPTNAGQPFVEK
PPIYDWVAAGTAWLFNRYLPLHDGARIASALFGALTLLCLARFARRSTDATRWLDLRVIG
SLALFAGTLVVVKHAHDMMTDVALMAGAALGFCGLFELVLSMQSTDSDDSPPHAAPRDRQ
AAAMFGAGVGIALMSKGLFVPLVFGATLCASIALYPACRSARFARALALAALVFAPFALI
WPICFYLRSEALFKVWLWDNNVGRFFGFSVPELGSENDDRLFVLKTMLTVGFPVVPLAVI
AFARLARSGWRQWREPRIALPLIFAGTGFAVLQTSATIRELYILPFIAPLAPLAARAIER
LPQRLHTVWDMTSRALFGVLVALAWAIWSTMTNPASSRAWLHLLGRWLPLDWTLPIHPVE
VAAALALTIGWLWLLPLVRHAGKWRGALSWCAGAIVAWGLVSTLLLPWLDLAKSYRSVFE
DLRTHLDAQWNDSDCMASLGLGESEAPMLKYFAHIEHVPVQSADAQTGSDGREACTWLIV
QTRRQNPAQPGDGWQLFWSGARPGDNDELLRVFVRTPSDIGGDD