Protein Info for QEN71_RS19725 in Paraburkholderia sabiae LMG 24235

Annotation: 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 763 PF08267: Meth_synt_1" amino acids 4 to 318 (315 residues), 383.1 bits, see alignment E=1.3e-118 TIGR01371: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase" amino acids 7 to 761 (755 residues), 1108.6 bits, see alignment E=0 PF01717: Meth_synt_2" amino acids 154 to 333 (180 residues), 24.5 bits, see alignment E=1.6e-09 amino acids 435 to 757 (323 residues), 522.2 bits, see alignment E=5.6e-161

Best Hits

Swiss-Prot: 86% identical to METE_PARP8: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (metE) from Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)

KEGG orthology group: K00549, 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC: 2.1.1.14] (inferred from 86% identity to bph:Bphy_5470)

Predicted SEED Role

"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)" in subsystem Methionine Biosynthesis (EC 2.1.1.14)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.1.1.14

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (763 amino acids)

>QEN71_RS19725 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase (Paraburkholderia sabiae LMG 24235)
MVTTHNLGFPRIGAKRELKFALEKYWKNESSRDELKMVGAELRERHWKDQAALDFAPVGD
FSFYDQVLDMSFTLGNLPERVRGFHGDALDNYFRVARGRSARGAEDHSACCGGVAAGEMT
KWFDTNYHYIVPEFDAHTNFSLDPSRLLEQLTQARKLGVKTKPVIVGPVTYLWLGKAKDD
SDKLALLPRLLPVYAALLDYFTAQGIEWVQIDEPALVTELDATWRQAFRTAYEALSERRV
KLLLATYFGQLQDNLELACKLPVDGLHIDAINARDEVVAVVAQLPATSVVSVGAINGRNI
WKTDLTAALEWLEPLHRSIGDRLWIAPSCSLLHTPVDLSSEQKLDAEIKSWLAFALQKLD
ELTVLAGALNNGRESVAEALAANAKAIESRRTSPRVHNPAVKAAIARIDASLGKRASAYE
QRVKTQSAILNLPAFPTTTIGSFPQTNEIRHARSQFKAGELDQAGYKLAMEQEITRAVKE
QEALGLDVLVHGEAERNDMVEYFGEQLDGYVFSQFGWVQSYGSRCVKPPILFGDISRPKA
MTVEWISYAQSQTAKPMKGMLTGPVTILNWSFVRDDQPRSVSCYQLALAIREEVLDLEKA
GVRVIQIDEAALREGLPLRRAQWNEYLQWAVESFRITANGVRDETQIHTHMCYSEFNDII
ASIADMDADVITIETSRSDMELLDAFDNFKYPNEIGPGVYDIHSPNIPSQEHIVNLMKKA
AERIPAGRLWVNPDCGLKTRQWAEVLPALTNMVAAAKTLRQSV