Protein Info for QEN71_RS15795 in Paraburkholderia sabiae LMG 24235

Annotation: non-ribosomal peptide synthetase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1660 PF00668: Condensation" amino acids 50 to 495 (446 residues), 332.1 bits, see alignment E=1.1e-102 amino acids 1119 to 1543 (425 residues), 242 bits, see alignment E=2.3e-75 PF00501: AMP-binding" amino acids 516 to 870 (355 residues), 256 bits, see alignment E=1.1e-79 TIGR01733: amino acid adenylation domain" amino acids 538 to 944 (407 residues), 401.3 bits, see alignment E=2.2e-124 PF13193: AMP-binding_C" amino acids 928 to 1007 (80 residues), 35.6 bits, see alignment 3e-12 PF00550: PP-binding" amino acids 1033 to 1096 (64 residues), 46.5 bits, see alignment (E = 7.4e-16) amino acids 1576 to 1637 (62 residues), 24.7 bits, see alignment (E = 4.7e-09)

Best Hits

Predicted SEED Role

"Non-ribosomal peptide synthetase modules, pyoverdine??" in subsystem Siderophore Pyoverdine

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1660 amino acids)

>QEN71_RS15795 non-ribosomal peptide synthetase (Paraburkholderia sabiae LMG 24235)
MKSTPDLLALAARFAQLPDTQRKLFITKLAEAGIDFRMLPIPARADRSSAVPASFAQTRL
WLHARMIDEPAAYHVTSRLRLDGELNRAVLRHAFDALIARHEALRTTFAESADGGVEQIV
HAPSRCPWRFTDLSRAAKADRERIAADVAVKDEEQPFDLASDALVRVHLIALNDTTHWLV
LTMHHVVSDGWSIDVLLDELAAFYRAYANGETVALAPLPVQYADFSLWQRRWLDAGEAGR
QLQFWREQVNADAGVIALPGSGARPMQRSARGGRHYFTIDAQAAQRVRALAQARRATPFA
VLLAALHALLARASGETHIQIGVPAANRERAETAGLIGFFVNTLVVGARVDMRKPFDALI
DDVQRALVDGQSHQDVPFEQIVEALGVPRSASHHPLFQVMASYAAGRVVPAFDGVRVTDL
PFGAPYAKFDLTLGFEEREDGALDAAFVYSADLFNAQAVQRIADQYAQLLDSALASSQVP
VGDLDWLTEEECAQIDAWNSYETDGAPFVPVHVKLAEHAQKKPDVSAVMDADMTLTRAEL
DARAARLAARMMTAGVGAEVRVGIAVGRSTDLFVGLLAILKSGGAFVPLDPTHPRERLAH
IVDDASIEHVVTERRHVPKLPLRHGTRVWLIDAEDDAAQEDIAYSAPSIAPTQAAYLIYT
SGSTGKPKGVVVDHASIAMHCEAIVTRYGMREKDRVLHFMSINFDGAHECWLAPLSAGVD
IRITDDALWPPAQTCETLASERITIAAFPPSYALQMAEWARAHGAPRSLRSLTVGGEATS
REAFSALRQAFPDVRVVNGYGPTETVITPLLWMIDAHEDATDIADAAYLPIGTPVGERTA
HVLDANLRPLPIGVTGELYLGGTGVARGYHARAALTAERFMPDPFGAPGARLYRTGDLVR
RRANGVLEFVGRIDHQVKVRGLRIELGEIEARLMAHDDVRDAVAVVRGSGVDAALAAYVE
LNEEASKRSKRVDGDALADHLRRALPDYMVPPHIVVLDALPRNANRKIDRAALPAPVRVE
RAFDAPAPGIETALAKIWCDVLRVERVGRADHFFELGGHSLAAVSVATRVSERLSHDVAV
RTLFEAPTLAAYAQRVAESPRATVRESSRHTQEENDVKDLALSDAQRALWFLWRAQPDSA
AYNIPVALRLRGVLNVSALQSAFDHAACKHPALRARLVSTEGAAEPRQMIDDHQRVTLAV
VDVRELASTDERIAAATRLTDEDALTPFDLAKAPLWRARLIRLADDDHVLSIVIHHIVAD
GQSIDVWLNDVQSAYLASATGKPLNTSPMKPAFAARTQVKPADLHFWRNALRDVEALRLP
QPSQARPVSPDWSAGRIAFELDAHSIERAKALAVSTQATLPMLLHAVLNVALARQIGTLD
QAVGVLASTRDRDTDDVIGLFINAVVVRTVMRESASPRDVIDAVREAALGAYAHVAAPFA
QVVDSVSASRTANGNPLFQVMFNYLRPAQSDSREWHGIEVDEFNDVRHRVVFDLELDIVE
HPDGRVTGAFSYGRELVDGAFVERLCADYLAAVTRFIDAPDEAIVISGDTHSPDRIKTNS
ATRAPSPRAAQLTQTLARIWAHTFDGEAPGIDDNVFEAGATSFDVVRFVDAANAAGYGIT
IDDVFVHQTLADLAGALAQRLDANIEREARETATEVRDAR