Protein Info for QEN71_RS14925 in Paraburkholderia sabiae LMG 24235

Annotation: FAD-dependent oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 415 PF07992: Pyr_redox_2" amino acids 7 to 303 (297 residues), 246.8 bits, see alignment E=1e-76 PF13738: Pyr_redox_3" amino acids 58 to 277 (220 residues), 38.5 bits, see alignment E=2.5e-13 PF00070: Pyr_redox" amino acids 148 to 228 (81 residues), 60.3 bits, see alignment E=6.5e-20 PF14759: Reductase_C" amino acids 322 to 409 (88 residues), 66.7 bits, see alignment E=6.8e-22

Best Hits

Swiss-Prot: 38% identical to CNDC1_SPHSD: Chloroacetanilide N-alkylformylase, ferredoxin reductase component (cndC1) from Sphingomonas wittichii (strain DC-6 / KACC 16600)

KEGG orthology group: None (inferred from 91% identity to bph:Bphy_3909)

Predicted SEED Role

"Ferredoxin reductase" in subsystem Anaerobic respiratory reductases

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (415 amino acids)

>QEN71_RS14925 FAD-dependent oxidoreductase (Paraburkholderia sabiae LMG 24235)
MSAQPAMVIVGAGQCGVRTAAALRENGWEGEITLLGNEGSAPYDRPPLSKAVLLGDRSTA
QCAFYDDAFYHDKRIDLRVDACVQHIDRGARKVVLHDGRSIDYQRLLIATGAEPRRLDVP
GAHLQGVHLLRTASDANTLAEELQPSRRIAIVGAGFIGLEVAASAVTRGCEVVVIEAGSR
ALMRAVPEVVAGYLIDRHRQMGVQIHFGAQIERLLGSTRVTGVKLKDGTQIDCDCVVVGI
GVKPRTELAEAAGIDVADGIAVDDTLRTNDPHIFAAGDVCSFPHRLFRRRMRLECWKNAE
DHARIVARNMLERGETYSEVPWFWSNQYDMTIQIAGMPAFGVQSVVRETGDTSRIFFALD
RDGVLVGASGVGKVAEIARDVRVAQTLIGQRACIDPMQLEDRNVKLKGLVAAEAV