Protein Info for QEN71_RS10695 in Paraburkholderia sabiae LMG 24235

Annotation: DHA2 family efflux MFS transporter permease subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 536 transmembrane" amino acids 44 to 67 (24 residues), see Phobius details amino acids 80 to 102 (23 residues), see Phobius details amino acids 111 to 137 (27 residues), see Phobius details amino acids 143 to 161 (19 residues), see Phobius details amino acids 173 to 192 (20 residues), see Phobius details amino acids 199 to 219 (21 residues), see Phobius details amino acids 231 to 251 (21 residues), see Phobius details amino acids 262 to 280 (19 residues), see Phobius details amino acids 302 to 324 (23 residues), see Phobius details amino acids 335 to 353 (19 residues), see Phobius details amino acids 364 to 385 (22 residues), see Phobius details amino acids 397 to 421 (25 residues), see Phobius details amino acids 437 to 456 (20 residues), see Phobius details amino acids 510 to 531 (22 residues), see Phobius details TIGR00711: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family" amino acids 46 to 506 (461 residues), 265.2 bits, see alignment E=5.7e-83 PF07690: MFS_1" amino acids 50 to 446 (397 residues), 175.9 bits, see alignment E=5.7e-56

Best Hits

KEGG orthology group: None (inferred from 93% identity to bph:Bphy_5313)

Predicted SEED Role

"FIG00468057: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (536 amino acids)

>QEN71_RS10695 DHA2 family efflux MFS transporter permease subunit (Paraburkholderia sabiae LMG 24235)
MSDHASLDGKRHPPHAFPAQASPCDDLAIRAHTADALPCRHKRLALAATILGSSMAFIDG
SVVNVALPSIQTELGASVAAMQWVVNAYLLLLGSLVLVGGALGDKLGRRTVFVAGIVLFT
AASAACGLAPASGALIAARAAQGAGAALLVPSSLAIIGAVFDERERGHAIGTWAGFGAIT
SALGPVAGGWLVDAFSWRAIFYLNVPIAVLTIALALPSVPNSRDTSASQRLDWAGALTAA
VGLGALTYGLTLASSHGFDDETVLGAIAGGLVLCGAFVAIEARSADPMMPLDVFHSRDFS
GANLVTLLLYFGLGGALFFLPFTLIRAHGYTATEAGAALLPVPVVIGVLSRFTGGLAARF
GPRALLTAGPVIAAAGFALLALPGWLDMDRAHYWTSYFPALAVLGLGMTITVAPLTTTVM
TSVTAARTGVASGINNAVARIASLLAIAVLGIVFVWSHDAALSERLAQLHIPTDLHRAGQ
LLAPDTMVGAHAVPTRIVDAQSDAIDAGLRAVALVSALCALLGAACAAMTIRGQHR