Protein Info for QEN71_RS09975 in Paraburkholderia sabiae LMG 24235

Annotation: ATP-binding sensor histidine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1800 1862 PF07714: PK_Tyr_Ser-Thr" amino acids 32 to 250 (219 residues), 67.2 bits, see alignment E=5.3e-22 PF00069: Pkinase" amino acids 41 to 252 (212 residues), 89.9 bits, see alignment E=6.8e-29 PF13191: AAA_16" amino acids 292 to 480 (189 residues), 145.3 bits, see alignment E=9.4e-46 PF01590: GAF" amino acids 1309 to 1453 (145 residues), 52.5 bits, see alignment 2.7e-17 PF13185: GAF_2" amino acids 1309 to 1454 (146 residues), 40.5 bits, see alignment E=1.1e-13 PF00512: HisKA" amino acids 1636 to 1699 (64 residues), 32.8 bits, see alignment (E = 2e-11) PF02518: HATPase_c" amino acids 1748 to 1858 (111 residues), 82.1 bits, see alignment 1.4e-26

Best Hits

Predicted SEED Role

"Signal transduction histidine kinase CheA (EC 2.7.3.-)" in subsystem Bacterial Chemotaxis or Flagellar motility or Two-component regulatory systems in Campylobacter (EC 2.7.3.-)

Isozymes

Compare fitness of predicted isozymes for: 2.7.3.-

Use Curated BLAST to search for 2.7.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1862 amino acids)

>QEN71_RS09975 ATP-binding sensor histidine kinase (Paraburkholderia sabiae LMG 24235)
MLEPLREGADCMLYRGIDPVSQLPILALSVAAEQLSPQSLRRLEHECSLADELDPAWAAQ
PLALVRQQARVLLILRDPGGEPLDQVIKRHKGQPLNLPRFLRIAIGLTSALCYAHQKGLI
HKDVKPANALVDDDGHAWLTGFGIASRLPRERQSPEAPEFIAGSLPYMAPEQTGRMNRSL
DSRSDLYSLGVTLYEMSTGELPFAASDPMEWVHCQIARQPASPRERTPELPAPVASIIMK
LLAKTAEERYQTAVGLERDLQRCQREWEQHGRIDSFPLGEHDRPDRLLIPEKLYGRAVEI
DTLLASFDRVMHGGRPELVLVSGYSGVGKSSLVYELHKPLVPPRGFFASGKFDQYKRDIP
YATLAQAFQSLIRPILAKDEAELARWRDAIHEALGPNGQLMIDLVPELKLIIGEQPPVPE
LPQQDAQSRFQLVFRRFIGVFTREHPLALFLDDLQWLDAATLDLMADLLTHPDVNHLLLI
GAYRDNEVVPTHPLTRKLEAIRESGAAVHDIVLAPLTRHDLEELIEDSLLCERARAEPLA
ELIAEKTAGNPFFAIQFFSGLAEESLLAFDYGKGQWSWDLNRIHARRYTDNVVDLMVGKL
HRLPVDTQNALQQLACLGNSADFAMLRMVYQESADAMHGQLWEAVRSGLVYRSDDAYSFL
HDRVQEAAYSLIPRELRAQTHLRIGMLMAANTAGDKLDEGIFEIVNQLNRGAHLIASVEE
RERVAGLNLIAGRRAKASTAYASALKYLHAGRELLTDETWTRRCDLIFAIEHLQAACEML
TADTAAAESRLSMLAERATSAHDIALVTCLRLMLYNLLGRSDRGVDVFIEYRRGHGEAWS
PRPTDADVSREYERIWSLMQGRTIAQLVDLPLIADPDVLDVLDVFTEAVISAMITDENLL
ALVLCRMVSISLAHGNSDASCFAYVSLGMLAGPHFGNYEAGFQLGKLGYDLVEKHGLHRY
QARVYLRFGNCITPWRRHVRTGRELVQRAFDAANDIGDLTFAAYSCHHLYTNRLATGDPL
ADVQRGAEIGLEFAEKARFGRVIDLIATQLALVRTLRGLTTTFGSLNDGFIDEPQFEEQL
SRDPILALPECWYWTRKLQARYFAGDYACAIDASRHAARLLWTSHSFFEVAEYHFYCALA
RAAAYDSAKEDERQEHVEALARHERQLAIWAESCADNFENRAALVGAEIARIEGRILDAE
QLYEKAIRSAHANGFVHNEAVANEVAARFYAARGFDKIARTYLRDARYGYLSWGADGKVR
QLDQLYPHIKDEQPDPGSTSTFVAPNELLDLATVIKISQVLSSEIVLPRLIETLIRIAVE
NAGAERGLLILLRGGARGGEPRIEAEATSGAGRIDVAVWQAAVTPSDLPLSALHYVMRTR
KLVLLDDARADDVYAADEYVQRKRSRSVLCLPIVRQAELVGALYLENNLAPCVFTSDRVS
LLQLLASQAAISLDNAALYTDLQRSEHRYRQLFSETPVGLWQTEAQVLVAMLADLRQQGV
QDLSQYIDAHPDWLSDAYDGLVLEDVNNHAMQMFGARDRRDLLGPLSWVWRANPGTFRRA
VTSRYNGEELFQETTKLPTLDGRIIDVLFTVARPRKNDDQGIAVISLVDLTERVRAQEML
QRVQADFAHAARISMLGELAASIAHELKQPLAAINMSGQAVLRWLNRPVPNLDEARATSE
RIMIDAQRAVNIIQRIRGMAVRDAPEHTLVSLAELIDEALGFLGHELQSQSIAVTRDYAA
GAQHVFADRVQLQQVIVNLTVNAMQAMTQARCERREITIRVDMQDAGTLCCAVEDSGPGI
APEHLDSLFESFFTTKENGMGMGLPICRSIIEAHGGRISADNRSVHGGARFGLTLPMASG
IR