Protein Info for QEN71_RS09245 in Paraburkholderia sabiae LMG 24235

Annotation: phosphoketolase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 794 PF09364: XFP_N" amino acids 13 to 372 (360 residues), 582.8 bits, see alignment E=3.4e-179 PF03894: XFP" amino acids 402 to 580 (179 residues), 286 bits, see alignment E=1.6e-89 PF09363: XFP_C" amino acids 591 to 792 (202 residues), 300.2 bits, see alignment E=9.5e-94

Best Hits

Swiss-Prot: 69% identical to PHK1_NOSS1: Probable phosphoketolase 1 (all1483) from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)

KEGG orthology group: K01621, phosphoketolase [EC: 4.1.2.9] (inferred from 94% identity to bph:Bphy_5497)

Predicted SEED Role

"Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9) @ Fructose-6-phosphate phosphoketolase (EC 4.1.2.22)" (EC 4.1.2.22, EC 4.1.2.9)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.1.2.22 or 4.1.2.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (794 amino acids)

>QEN71_RS09245 phosphoketolase family protein (Paraburkholderia sabiae LMG 24235)
MDDTRQQRTPLQADELRNMDRYWRACNYLSAGMIYLRENPLLREPLVADHIKRRLLGHWG
SDPGQSFTLVHLNRVIKQRDLNVIFISGPGHGAPATLAHSYLEGRYSEIYPDRGETEEGM
ARLFRLFSFPGGIGSHCTPETPGSIHEGGELGYSLSHAYGAAFDNPDLIVAAMIGDGEAE
TGPLATSWHSNKFLNPARDGAVLPVLHLNGYKIANPTILARIPHEELEALMTGYGYQPWF
VEGDDPDTMHQQMAATLDQCVDEIQAIQRRARDEGNLQRPRWPMIVLRTPKGWTGPREFG
GHKVEGSWRAHQVPIADPASNDKSLKLVEEWLRSYRPEELFDESGRLVAELRALAPEGAR
RISANPHANGGALCKALDLPDFGDYAVEVEAPATRYVSPTDVLGQFLRDVMRRNMTSFRV
FGPDETSSNKLTAIYEASQKTWLAEILESDSDGGDLSADGRVMEMLSEHTLEGWLEGYTL
TGRHGLFATYEAFVHVIDSMFNQHAKWLEKAKRELRWRQPVPSLNLLITSLVWRQDHNGF
THQDPGFLDVVTNKSPDVVRIYLPPDANCLLSVADHCLRSRDYVNVIVADKQPHLQYLDM
QSAITHCTKGIGIWDWASTDQDHEPDVVMASAGDIPTMEALAAVEILKGLFPDLKIRFVN
VVDLFRLMPDSDHPHGLSKRDFDSLFTTDKPVIFNFHSYASLVHKLTYRRTNHENIHVHG
YAEKGNINTPLELAIINGIDRFSLAIDVIDRVPALRGVGDHAKERLRDKRIEHLDYAHTE
GIDSEQIREWTWTG