Protein Info for QEN71_RS08720 in Paraburkholderia sabiae LMG 24235

Annotation: ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 343 signal peptide" amino acids 1 to 30 (30 residues), see Phobius details PF00158: Sigma54_activat" amino acids 37 to 153 (117 residues), 28 bits, see alignment E=4.1e-10 PF07728: AAA_5" amino acids 38 to 167 (130 residues), 44.8 bits, see alignment E=3.2e-15 PF00493: MCM" amino acids 38 to 160 (123 residues), 30.4 bits, see alignment E=5.3e-11 PF01078: Mg_chelatase" amino acids 90 to 155 (66 residues), 30.6 bits, see alignment E=5.5e-11 PF17863: AAA_lid_2" amino acids 233 to 296 (64 residues), 58.5 bits, see alignment E=1.1e-19

Best Hits

KEGG orthology group: K03405, magnesium chelatase subunit I [EC: 6.6.1.1] (inferred from 82% identity to bph:Bphy_3151)

Predicted SEED Role

"ChlI component of cobalt chelatase involved in B12 biosynthesis" in subsystem Coenzyme B12 biosynthesis

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 6.6.1.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (343 amino acids)

>QEN71_RS08720 ATP-binding protein (Paraburkholderia sabiae LMG 24235)
MSEVNAPRAVFPFSALIGQAPLQQALLLAAVDPGIGGVLVSGPRGTAKSTAARALAELLP
DGQFVTLPLGASEDRLIGTLDIESALRDASVRFAPGLLAKAHGGVLYVDEVNLLPDALVD
VLLDAAASGVNTIERDGVSHSHDARFVLIGTMNPEEGELRPQLADRFGLMVELANCYEPQ
TRQAIVKARLAFDLDAAGFRTLHSAEQAGYVVRIREARVALARLSFDDAVHAHVSALCIA
AGVDGLRADLVMLRAARALAAFEQADAVTLGHVDRVAESVLLHRRRLHEDAERPQEAPGS
GDARNASVDQASHSTDSDYGYLPPEPTGITRVKQVIPLPAKKH