Protein Info for QEN71_RS05175 in Paraburkholderia sabiae LMG 24235

Annotation: DUF2069 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 143 transmembrane" amino acids 21 to 39 (19 residues), see Phobius details amino acids 45 to 65 (21 residues), see Phobius details amino acids 72 to 91 (20 residues), see Phobius details amino acids 98 to 122 (25 residues), see Phobius details PF09842: DUF2069" amino acids 22 to 120 (99 residues), 110 bits, see alignment E=3e-36

Best Hits

KEGG orthology group: None (inferred from 84% identity to bph:Bphy_1577)

Predicted SEED Role

"Probable transmembrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (143 amino acids)

>QEN71_RS05175 DUF2069 domain-containing protein (Paraburkholderia sabiae LMG 24235)
MSRDAAAATHDAQGNRAAASGALLALVVLIALCVAWEWWLAPLRAGGSLLVLKAAPLLLA
LPGVWRKRLYTLQWASMLSLLYLMEGIVRGMSDRGLSAQLGWCEALLAVVFFVCALVYVA
PFKRAAKHRARRENETARGPASG