Protein Info for QEN71_RS02760 in Paraburkholderia sabiae LMG 24235

Annotation: AMP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 527 transmembrane" amino acids 224 to 248 (25 residues), see Phobius details PF00501: AMP-binding" amino acids 39 to 392 (354 residues), 269.5 bits, see alignment E=4.2e-84 PF13193: AMP-binding_C" amino acids 443 to 517 (75 residues), 54.5 bits, see alignment E=1.9e-18

Best Hits

KEGG orthology group: None (inferred from 89% identity to bph:Bphy_0524)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (527 amino acids)

>QEN71_RS02760 AMP-binding protein (Paraburkholderia sabiae LMG 24235)
MNTAQHSPDGSQSVPQSVDVAALLAALPERIADIPRRIALRDPQHVALIEDRRRLTRAQL
VDAVDAVAALLAEQGVRAGDRVMIVAENSVVQIVLMFAAAKLDAWALMSNARLSAAELDA
IRTHAQPRLTAYAVDVSPDARQHAERHGAQPAHQIAADIGTWSYALDNNAQAEPAEAASD
RQCAALIYTTGTTGSPKGVMLSHRNLLFIAAISSTLRRVNADDIVYAVLPISHVYGLASV
CLGSLYAGATLRLAPRFSPDAVQHALAEEHVSIFQGVPAMHAKLLEYLQAKGLPWSAPKL
RFAYSGGSPLDAALKSRVESVYGVTLHNGYGMTESSPTVSQTMIESPRTDCSVGQAIPGI
EVRFVGLDGVDVTQGEVGELWVRGPNVMLGYYRNPQQTQAAVTEDGWLKTGDLARQDSDG
ALHIAGRSKELIIRSGFNVYPAEVEHVLNAHPDVVQSAVIGRAVEGNEEVVAFVELTGGA
TATPADLAAWCEARLAPYKRPAEIKVLAALPAASTGKILKHRLRDLA