Protein Info for QEN71_RS02705 in Paraburkholderia sabiae LMG 24235

Annotation: cyclopropane-fatty-acyl-phospholipid synthase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 404 PF02353: CMAS" amino acids 109 to 380 (272 residues), 339.9 bits, see alignment E=4.2e-105 PF08123: DOT1" amino acids 156 to 212 (57 residues), 25 bits, see alignment 5.3e-09 PF13489: Methyltransf_23" amino acids 168 to 277 (110 residues), 41.6 bits, see alignment E=4.5e-14 PF13847: Methyltransf_31" amino acids 170 to 270 (101 residues), 32.8 bits, see alignment E=2.3e-11 PF08241: Methyltransf_11" amino acids 174 to 269 (96 residues), 46.4 bits, see alignment E=2.1e-15 PF08242: Methyltransf_12" amino acids 174 to 268 (95 residues), 41.6 bits, see alignment E=7e-14 PF13649: Methyltransf_25" amino acids 174 to 267 (94 residues), 58.7 bits, see alignment E=3.2e-19

Best Hits

Swiss-Prot: 46% identical to FAMT_PSEPU: Probable fatty acid methyltransferase from Pseudomonas putida

KEGG orthology group: K00574, cyclopropane-fatty-acyl-phospholipid synthase [EC: 2.1.1.79] (inferred from 96% identity to bph:Bphy_0513)

Predicted SEED Role

"Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79)" (EC 2.1.1.79)

MetaCyc Pathways

Isozymes

Compare fitness of predicted isozymes for: 2.1.1.79

Use Curated BLAST to search for 2.1.1.79

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (404 amino acids)

>QEN71_RS02705 cyclopropane-fatty-acyl-phospholipid synthase family protein (Paraburkholderia sabiae LMG 24235)
MFWEKKLAQWVEEVKAKANIPARLVLWDGQQHDFGVFAAPAVTLKVNSASALPLLLEPSL
DNLGEAYVKGKIDIEGKLSDIINISYSLARSTVTSASKLARVRRYFNHTKTSDKKAIQYH
YDVSNEFYKLWLDENMVYSCAYFENGDEDLATAQIKKIDHILTKIQVQPGQRLLDIGCGW
GALVLRAAQKFGAKCVGVTLSQNQFDLATQRVKAAGLEGQIEIRLQDYRDVEGQFDRITS
VGMFEHVGRKNLPTYFQKVHDLLADEGIAMNHGITSTDYDSGETALGGGEFIDRYVFPDG
ELPHISLALECMQRGGLEAFDIESLRRHYARTLDIWAENFEANAAVAKTLVEDEKFRIWR
VYLAGCAYAFENDDVSIYQVVCRRAGRSAKTLPWSRRFMYEKAL