Protein Info for QEN71_RS00700 in Paraburkholderia sabiae LMG 24235

Annotation: N-6 DNA methylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1302 transmembrane" amino acids 1136 to 1154 (19 residues), see Phobius details PF02384: N6_Mtase" amino acids 441 to 558 (118 residues), 28.5 bits, see alignment E=9.9e-11

Best Hits

Predicted SEED Role

"Possible restriction /modification enzyme"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1302 amino acids)

>QEN71_RS00700 N-6 DNA methylase (Paraburkholderia sabiae LMG 24235)
MARKPVVDMAVWPSLGLEGNLIVPAMIAQIAAPKDDEETRQSYGIRKGLTIREEIATAFR
VGQSHFDAFLRIKAPSAEATRRFMRDFLTETFGFEDLVTSGGAISFIAGGRVPVVVVPPN
EEKLDRRSVTLSTDRSRSPAVALQDYLNDNDDCLWGLVTNGTVIRLMRDNASLTRPAYIE
ADLTQIFVNEDAASFAVLWLLLHRTRFGSQGNTAADCALERWRDAGAREGETARDRLAGQ
VQSALKLLGSGFLEANPDLAARLMAGEISLTDWFNELLRLVYRLIFLMVAEDRNLLHPPD
APADARKLYADGYSLTALRAQCFRGATWDKHHDRYEGVKITFHALATGQDVLALPALGGL
FADGALPHLTNARLRNHAFMQALYRLSWLAEKASMVPVNWRAMETEELGSVYESLLELQP
QLGDDGRSLVFASEAAEQKGNQRKTTGSYYTPDSLVQALLDTALDPVLDRIEVQADDPVK
ALLRLSVIDPACGSGHFLLAAARRIATRLARIRAEGTPSLADFRHALRDVARYCIHGVDR
NPMAVELTKVALWIETVDPGLPLGFFDAQIRCGDALLGVFDLKVLEKGIPDAAYKPLIGD
DKATAKYYLQANTDAKKGQGGFDFGTGQSSMPALRPLALDFSGFRALPEDTVEQIRAKAE
RFEELCNKQEFIQAEAAADLYVGTFLMPKTGGLPSGAFAHTVPTTAELRADEAQGDVRKV
RLDAAKAARQARAFHWPLEFPDVMQGGGFDVVLGNPPWERIKLQEQEFFAARSPEIASAP
NKAARDLLIKALRDSPAGSAERALSDAFIAAKRQAEATSEFVRVVGEDGGRFVLTGRGDV
NTYALFAELFSKLSRLRAGVIVPTGIATDATTAPFFALLVEQKRLASLVDFENREKLFPA
VDSRMKFCLLTLGRDEEEARFAFFLTDAAQLAEPERNFTLSAETIAGLNPNTRTVPVFRS
RADAELTAKIHQSTPILRMDAKSSNPWGFDYMTKMFDMADNSGEFADAKDIGVPSVSDGR
IRADVPLQGQCVPLYEAKNLHIFDHRWSSFDVAENETIDVVASKKEETTFEIKTRYWVRE
SRLLERLQSKDWTRQWLMGWRDITNATNERTTIAGFFPRCAAAHTLRVMFLGTDAKLAML
FVGCLSSLVFDYVARQKIGGTHLTVETLKQLPVLEPSVYGENDVSFLLPRLVELVYTSAS
MRVLAEDAGYAGPPFPWNTERRAFLRAELDAYYARMYGLTRDELRYILDPAEVKGPDYPS
ETFRVLKEKEIRQYGEYRTRSLVLEAWDRMAQKGELADTVML